RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 SKIV2LQ15477 1246 aaKnown RBP27.26■■□□□ 1.95
HLA-C-209ENST00000495835 UGCGQ16739 394 aa27.26■■□□□ 1.95
HLA-C-209ENST00000495835 KRT40Q6A162 431 aa27.26■■□□□ 1.95
HLA-C-209ENST00000495835 OXER1Q8TDS5 423 aa27.26■■□□□ 1.95
HLA-C-209ENST00000495835 GJA10Q969M2 543 aa27.26■■□□□ 1.95
HLA-C-209ENST00000495835 TMX1Q9H3N1 280 aa27.26■■□□□ 1.95
HLA-C-209ENST00000495835 CDHR5Q9HBB8 845 aa27.26■■□□□ 1.95
HLA-C-209ENST00000495835 C1orf112Q9NSG2 853 aa27.26■■□□□ 1.95
HLA-C-209ENST00000495835 GJB4Q9NTQ9 266 aa27.26■■□□□ 1.95
HLA-C-209ENST00000495835 GINS2Q9Y248 185 aa27.26■■□□□ 1.95
HLA-C-209ENST00000495835 CCNT1O60563 726 aaKnown RBP27.25■■□□□ 1.95
HLA-C-209ENST00000495835 TBC1D8BQ0IIM8 1120 aa27.25■■□□□ 1.95
HLA-C-209ENST00000495835 KIZQ2M2Z5 673 aa27.25■■□□□ 1.95
HLA-C-209ENST00000495835 MRPL38Q96DV4 380 aaKnown RBP27.25■■□□□ 1.95
HLA-C-209ENST00000495835 RGS18Q9NS28 235 aa27.25■■□□□ 1.95
HLA-C-209ENST00000495835 ST3GAL5Q9UNP4 418 aa27.25■■□□□ 1.95
HLA-C-209ENST00000495835 LIMCH1Q9UPQ0 1083 aa27.25■■□□□ 1.95
HLA-C-209ENST00000495835 VTNP04004 478 aa27.24■■□□□ 1.95
HLA-C-209ENST00000495835 BMPR1AP36894 532 aa27.24■■□□□ 1.95
HLA-C-209ENST00000495835 SARSP49591 514 aaKnown RBP27.24■■□□□ 1.95
HLA-C-209ENST00000495835 PSMC5P62195 406 aa27.24■■□□□ 1.95
HLA-C-209ENST00000495835 GPM6BQ13491 265 aa27.24■■□□□ 1.95
HLA-C-209ENST00000495835 TRIM29Q14134 588 aa27.24■■□□□ 1.95
HLA-C-209ENST00000495835 BTG3Q14201 252 aaPredicted RBP27.24■■□□□ 1.95
HLA-C-209ENST00000495835 SLFN12Q8IYM2 578 aa27.24■■□□□ 1.95
HLA-C-209ENST00000495835 CMTR2Q8IYT2 770 aaKnown RBP27.24■■□□□ 1.95
HLA-C-209ENST00000495835 TMEM40Q8WWA1 233 aa27.24■■□□□ 1.95
HLA-C-209ENST00000495835 TNFRSF25Q93038 417 aa27.24■■□□□ 1.95
HLA-C-209ENST00000495835 HLA-CQ95604 372 aa27.24■■□□□ 1.95
HLA-C-209ENST00000495835 AKT3Q9Y243 479 aa27.24■■□□□ 1.95
HLA-C-209ENST00000495835 BAG4O95429 457 aaKnown RBP27.23■■□□□ 1.95
HLA-C-209ENST00000495835 MMP1P03956 469 aa27.23■■□□□ 1.95
HLA-C-209ENST00000495835 CLCN3P51790 818 aa27.23■■□□□ 1.95
HLA-C-209ENST00000495835 NLRP11P59045 1033 aaKnown RBP27.23■■□□□ 1.95
HLA-C-209ENST00000495835 TMEM266Q2M3C6 531 aa27.23■■□□□ 1.95
HLA-C-209ENST00000495835 SLC24A5Q71RS6 500 aa27.23■■□□□ 1.95
HLA-C-209ENST00000495835 IL27Q8NEV9 243 aa27.23■■□□□ 1.95
HLA-C-209ENST00000495835 OSMRQ99650 979 aa27.23■■□□□ 1.95
HLA-C-209ENST00000495835 PLVAPQ9BX97 442 aa27.23■■□□□ 1.95
HLA-C-209ENST00000495835 LMAN2LQ9H0V9 348 aa27.23■■□□□ 1.95
HLA-C-209ENST00000495835 VAV3Q9UKW4 847 aa27.23■■□□□ 1.95
HLA-C-209ENST00000495835 PPME1Q9Y570 386 aa27.23■■□□□ 1.95
HLA-C-209ENST00000495835 STBD1O95210 358 aa27.22■■□□□ 1.95
HLA-C-209ENST00000495835 LINC00271P0C7V0 271 aa27.22■■□□□ 1.95
HLA-C-209ENST00000495835 EIF4BP23588 611 aaKnown RBP27.22■■□□□ 1.95
HLA-C-209ENST00000495835 QARSP47897 775 aaKnown RBP27.22■■□□□ 1.95
HLA-C-209ENST00000495835 DNM2P50570 870 aa27.22■■□□□ 1.95
HLA-C-209ENST00000495835 EXOC8Q8IYI6 725 aa27.22■■□□□ 1.95
HLA-C-209ENST00000495835 HAS1Q92839 578 aa27.22■■□□□ 1.95
HLA-C-209ENST00000495835 ZSCAN31Q96LW9 406 aaPredicted RBP27.22■■□□□ 1.95
HLA-C-209ENST00000495835 JPH2Q9BR39 696 aaPredicted RBP27.22■■□□□ 1.95
HLA-C-209ENST00000495835 LLPHQ9BRT6 129 aaKnown RBP27.22■■□□□ 1.95
HLA-C-209ENST00000495835 C11orf84Q9BUA3 381 aaPredicted RBP27.22■■□□□ 1.95
HLA-C-209ENST00000495835 ADAMTS10Q9H324 1103 aa27.22■■□□□ 1.95
HLA-C-209ENST00000495835 LRFN2Q9ULH4 789 aa27.22■■□□□ 1.95
HLA-C-209ENST00000495835 IGKV6-21A0A0C4DH24 114 aa27.21■■□□□ 1.95
HLA-C-209ENST00000495835 DENND3A2RUS2 1198 aa27.21■■□□□ 1.95
HLA-C-209ENST00000495835 MARCH6O60337 910 aa27.21■■□□□ 1.95
HLA-C-209ENST00000495835 P4HBP07237 508 aaKnown RBP27.21■■□□□ 1.95
HLA-C-209ENST00000495835 NR5A1Q13285 461 aa27.21■■□□□ 1.95
HLA-C-209ENST00000495835 NAALADL2Q58DX5 795 aa27.21■■□□□ 1.95
HLA-C-209ENST00000495835 FAM228AQ86W67 206 aa27.21■■□□□ 1.95
HLA-C-209ENST00000495835 LRRC71Q8N4P6 559 aa27.21■■□□□ 1.95
HLA-C-209ENST00000495835 CEP89Q96ST8 783 aa27.21■■□□□ 1.95
HLA-C-209ENST00000495835 ADAM2Q99965 735 aa27.21■■□□□ 1.95
HLA-C-209ENST00000495835 SEPT9Q9UHD8 586 aaPredicted RBP27.21■■□□□ 1.95
HLA-C-209ENST00000495835 PCDHB7Q9Y5E2 793 aa27.21■■□□□ 1.95
HLA-C-209ENST00000495835 CTNNB1P35222 781 aa27.2■■□□□ 1.94
HLA-C-209ENST00000495835 FAM189BP81408 668 aa27.2■■□□□ 1.94
HLA-C-209ENST00000495835 EPHA7Q15375 998 aa27.2■■□□□ 1.94
HLA-C-209ENST00000495835 C8orf34Q49A92 452 aa27.2■■□□□ 1.94
HLA-C-209ENST00000495835 TIGD5Q53EQ6 642 aa27.2■■□□□ 1.94
HLA-C-209ENST00000495835 EARS2Q5JPH6 523 aaKnown RBP27.2■■□□□ 1.94
HLA-C-209ENST00000495835 P2RX5Q93086 422 aa27.2■■□□□ 1.94
HLA-C-209ENST00000495835 ELAC1Q9H777 363 aaKnown RBP27.2■■□□□ 1.94
HLA-C-209ENST00000495835 TTC28Q96AY4 2481 aa27.19■■□□□ 1.94
HLA-C-209ENST00000495835 DDX11L8A8MPP1 907 aa27.19■■□□□ 1.94
HLA-C-209ENST00000495835 C9IYK1 514 aa27.19■■□□□ 1.94
HLA-C-209ENST00000495835 EML1O00423 815 aa27.19■■□□□ 1.94
HLA-C-209ENST00000495835 MAFO75444 373 aaPredicted RBP27.19■■□□□ 1.94
HLA-C-209ENST00000495835 GPC3P51654 580 aa27.19■■□□□ 1.94
HLA-C-209ENST00000495835 MTERF2Q49AM1 385 aa27.19■■□□□ 1.94
HLA-C-209ENST00000495835 DIS3L2Q8IYB7 885 aaKnown RBP27.19■■□□□ 1.94
HLA-C-209ENST00000495835 BANK1Q8NDB2 785 aa27.19■■□□□ 1.94
HLA-C-209ENST00000495835 BTBD18B2RXH4 712 aa27.18■■□□□ 1.94
HLA-C-209ENST00000495835 MGEA5O60502 916 aa27.18■■□□□ 1.94
HLA-C-209ENST00000495835 JAK2O60674 1132 aa27.18■■□□□ 1.94
HLA-C-209ENST00000495835 DTNBO60941 627 aa27.18■■□□□ 1.94
HLA-C-209ENST00000495835 BMP1P13497 986 aa27.18■■□□□ 1.94
HLA-C-209ENST00000495835 DSC3Q14574 896 aa27.18■■□□□ 1.94
HLA-C-209ENST00000495835 ANO5Q75V66 913 aa27.18■■□□□ 1.94
HLA-C-209ENST00000495835 C4orf19Q8IY42 314 aa27.18■■□□□ 1.94
HLA-C-209ENST00000495835 SH2B1Q9NRF2 756 aaPredicted RBP27.18■■□□□ 1.94
HLA-C-209ENST00000495835 TMEM161AQ9NX61 479 aa27.18■■□□□ 1.94
HLA-C-209ENST00000495835 MUC3AQ02505 3323 aa27.18■■□□□ 1.94
HLA-C-209ENST00000495835 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.17■■□□□ 1.94
HLA-C-209ENST00000495835 DARSP14868 501 aaKnown RBP27.17■■□□□ 1.94
HLA-C-209ENST00000495835 ZSCAN20P17040 1043 aaPredicted RBP27.17■■□□□ 1.94
HLA-C-209ENST00000495835 POTEDQ86YR6 584 aa27.17■■□□□ 1.94
HLA-C-209ENST00000495835 PPP1R16BQ96T49 567 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms