RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 LONP1P36776 959 aaKnown RBP21.69■■□□□ 1.06
HDAC4-212ENST00000495497 RARRES1P49788 294 aa21.69■■□□□ 1.06
HDAC4-212ENST00000495497 SHHQ15465 462 aa21.69■■□□□ 1.06
HDAC4-212ENST00000495497 TCTN1Q2MV58 587 aa21.69■■□□□ 1.06
HDAC4-212ENST00000495497 TMEM240Q5SV17 173 aa21.69■■□□□ 1.06
HDAC4-212ENST00000495497 ZNF365Q70YC5 407 aa21.69■■□□□ 1.06
HDAC4-212ENST00000495497 CABP7Q86V35 215 aa21.69■■□□□ 1.06
HDAC4-212ENST00000495497 PNMA5Q96PV4 448 aa21.69■■□□□ 1.06
HDAC4-212ENST00000495497 AKT3Q9Y243 479 aa21.69■■□□□ 1.06
HDAC4-212ENST00000495497 E9PMD0 336 aa21.68■■□□□ 1.06
HDAC4-212ENST00000495497 SPTLC2O15270 562 aa21.68■■□□□ 1.06
HDAC4-212ENST00000495497 RFC2P35250 354 aa21.68■■□□□ 1.06
HDAC4-212ENST00000495497 POLGP54098 1239 aaPredicted RBP21.68■■□□□ 1.06
HDAC4-212ENST00000495497 GRB10Q13322 594 aa21.68■■□□□ 1.06
HDAC4-212ENST00000495497 USP49Q70CQ1 688 aa21.68■■□□□ 1.06
HDAC4-212ENST00000495497 KCNK18Q7Z418 384 aa21.68■■□□□ 1.06
HDAC4-212ENST00000495497 RPUSD2Q8IZ73 545 aaKnown RBP21.68■■□□□ 1.06
HDAC4-212ENST00000495497 NME8Q8N427 588 aa21.68■■□□□ 1.06
HDAC4-212ENST00000495497 AK8Q96MA6 479 aa21.68■■□□□ 1.06
HDAC4-212ENST00000495497 CCDC43Q96MW1 224 aaKnown RBP21.68■■□□□ 1.06
HDAC4-212ENST00000495497 DHX33Q9H6R0 707 aaKnown RBP21.68■■□□□ 1.06
HDAC4-212ENST00000495497 GINS2Q9Y248 185 aa21.68■■□□□ 1.06
HDAC4-212ENST00000495497 TRPV2Q9Y5S1 764 aa21.68■■□□□ 1.06
HDAC4-212ENST00000495497 SCN5AQ14524 2016 aa21.67■■□□□ 1.06
HDAC4-212ENST00000495497 GHRP10912 638 aa21.67■■□□□ 1.06
HDAC4-212ENST00000495497 XRCC6P12956 609 aaKnown RBP eCLIP21.67■■□□□ 1.06
HDAC4-212ENST00000495497 MUTP22033 750 aa21.67■■□□□ 1.06
HDAC4-212ENST00000495497 TMOD1P28289 359 aa21.67■■□□□ 1.06
HDAC4-212ENST00000495497 EMC2Q15006 297 aa21.67■■□□□ 1.06
HDAC4-212ENST00000495497 KIZQ2M2Z5 673 aa21.67■■□□□ 1.06
HDAC4-212ENST00000495497 IER5Q5VY09 327 aa21.67■■□□□ 1.06
HDAC4-212ENST00000495497 KRI1Q8N9T8 703 aaKnown RBP21.67■■□□□ 1.06
HDAC4-212ENST00000495497 TMEM143Q96AN5 459 aa21.67■■□□□ 1.06
HDAC4-212ENST00000495497 EPSTI1Q96J88 318 aa21.67■■□□□ 1.06
HDAC4-212ENST00000495497 MAP7D2Q96T17 732 aa21.67■■□□□ 1.06
HDAC4-212ENST00000495497 CELF4Q9BZC1 486 aaKnown RBP21.67■■□□□ 1.06
HDAC4-212ENST00000495497 XPNPEP1Q9NQW7 623 aa21.67■■□□□ 1.06
HDAC4-212ENST00000495497 DBR1Q9UK59 544 aaKnown RBP21.67■■□□□ 1.06
HDAC4-212ENST00000495497 RBM19Q9Y4C8 960 aaKnown RBP21.67■■□□□ 1.06
HDAC4-212ENST00000495497 M0QZ92 97 aa21.66■■□□□ 1.06
HDAC4-212ENST00000495497 USO1O60763 962 aaKnown RBP21.66■■□□□ 1.06
HDAC4-212ENST00000495497 YEATS4O95619 227 aa21.66■■□□□ 1.06
HDAC4-212ENST00000495497 FGBP02675 491 aa21.66■■□□□ 1.06
HDAC4-212ENST00000495497 CXCL10P02778 98 aa21.66■■□□□ 1.06
HDAC4-212ENST00000495497 NCLP19338 710 aaKnown RBP21.66■■□□□ 1.06
HDAC4-212ENST00000495497 RFC5P40937 340 aa21.66■■□□□ 1.06
HDAC4-212ENST00000495497 UBA7P41226 1012 aa21.66■■□□□ 1.06
HDAC4-212ENST00000495497 OTOP2Q7RTS6 562 aa21.66■■□□□ 1.06
HDAC4-212ENST00000495497 SLC7A3Q8WY07 619 aa21.66■■□□□ 1.06
HDAC4-212ENST00000495497 SUCLA2Q9P2R7 463 aaPredicted RBP21.66■■□□□ 1.06
HDAC4-212ENST00000495497 PPME1Q9Y570 386 aa21.66■■□□□ 1.06
HDAC4-212ENST00000495497 MORC2Q9Y6X9 1032 aaPredicted RBP21.66■■□□□ 1.06
HDAC4-212ENST00000495497 TANC1Q9C0D5 1861 aa21.65■■□□□ 1.06
HDAC4-212ENST00000495497 GPR32O75388 356 aa21.65■■□□□ 1.06
HDAC4-212ENST00000495497 PARNO95453 639 aaKnown RBP21.65■■□□□ 1.06
HDAC4-212ENST00000495497 NLRP11P59045 1033 aaKnown RBP21.65■■□□□ 1.06
HDAC4-212ENST00000495497 NUCB2P80303 420 aa21.65■■□□□ 1.06
HDAC4-212ENST00000495497 LPIN1Q14693 890 aa21.65■■□□□ 1.06
HDAC4-212ENST00000495497 KARSQ15046 597 aaKnown RBP21.65■■□□□ 1.06
HDAC4-212ENST00000495497 FBXO47Q5MNV8 452 aa21.65■■□□□ 1.06
HDAC4-212ENST00000495497 HYIQ5T013 277 aa21.65■■□□□ 1.06
HDAC4-212ENST00000495497 PSRC1Q6PGN9 363 aaPredicted RBP21.65■■□□□ 1.06
HDAC4-212ENST00000495497 MAEAQ7L5Y9 396 aa21.65■■□□□ 1.06
HDAC4-212ENST00000495497 KSR1Q8IVT5 923 aa21.65■■□□□ 1.06
HDAC4-212ENST00000495497 LRRC15Q8TF66 581 aa21.65■■□□□ 1.06
HDAC4-212ENST00000495497 SYMPKQ92797 1274 aaKnown RBP21.65■■□□□ 1.06
HDAC4-212ENST00000495497 CDK5RAP3Q96JB5 506 aa21.65■■□□□ 1.06
HDAC4-212ENST00000495497 OSMRQ99650 979 aa21.65■■□□□ 1.06
HDAC4-212ENST00000495497 MTRQ99707 1265 aa21.65■■□□□ 1.06
HDAC4-212ENST00000495497 BHMT2Q9H2M3 363 aa21.65■■□□□ 1.06
HDAC4-212ENST00000495497 DNM3Q9UQ16 869 aa21.65■■□□□ 1.06
HDAC4-212ENST00000495497 MYH15Q9Y2K3 1946 aa21.65■■□□□ 1.06
HDAC4-212ENST00000495497 KDM3AQ9Y4C1 1321 aa21.64■■□□□ 1.05
HDAC4-212ENST00000495497 ARHGEF35A5YM69 484 aa21.64■■□□□ 1.05
HDAC4-212ENST00000495497 PPP6R2O75170 966 aa21.64■■□□□ 1.05
HDAC4-212ENST00000495497 DGAT1O75907 488 aa21.64■■□□□ 1.05
HDAC4-212ENST00000495497 RPLP2P05387 115 aaKnown RBP21.64■■□□□ 1.05
HDAC4-212ENST00000495497 DNM2P50570 870 aa21.64■■□□□ 1.05
HDAC4-212ENST00000495497 GPC3P51654 580 aa21.64■■□□□ 1.05
HDAC4-212ENST00000495497 TMEM119Q4V9L6 283 aa21.64■■□□□ 1.05
HDAC4-212ENST00000495497 ATL3Q6DD88 541 aa21.64■■□□□ 1.05
HDAC4-212ENST00000495497 PADI6Q6TGC4 694 aa21.64■■□□□ 1.05
HDAC4-212ENST00000495497 RHPN2Q8IUC4 686 aa21.64■■□□□ 1.05
HDAC4-212ENST00000495497 TDHQ8IZJ6 230 aa21.64■■□□□ 1.05
HDAC4-212ENST00000495497 DBF4BQ8NFT6 615 aa21.64■■□□□ 1.05
HDAC4-212ENST00000495497 TMEM40Q8WWA1 233 aa21.64■■□□□ 1.05
HDAC4-212ENST00000495497 JPH2Q9BR39 696 aaPredicted RBP21.64■■□□□ 1.05
HDAC4-212ENST00000495497 ADAMTS10Q9H324 1103 aa21.64■■□□□ 1.05
HDAC4-212ENST00000495497 AGO3Q9H9G7 860 aaKnown RBP21.64■■□□□ 1.05
HDAC4-212ENST00000495497 ATP6V0A4Q9HBG4 840 aa21.64■■□□□ 1.05
HDAC4-212ENST00000495497 POLD4Q9HCU8 107 aa21.64■■□□□ 1.05
HDAC4-212ENST00000495497 CFAP45Q9UL16 551 aa21.64■■□□□ 1.05
HDAC4-212ENST00000495497 EYA4O95677 639 aa21.63■■□□□ 1.05
HDAC4-212ENST00000495497 PFKMP08237 780 aa21.63■■□□□ 1.05
HDAC4-212ENST00000495497 PLEKHG4Q58EX7 1191 aa21.63■■□□□ 1.05
HDAC4-212ENST00000495497 PRPF31Q8WWY3 499 aaKnown RBP21.63■■□□□ 1.05
HDAC4-212ENST00000495497 CALML4Q96GE6 196 aa21.63■■□□□ 1.05
HDAC4-212ENST00000495497 GPRC5CQ9NQ84 441 aa21.63■■□□□ 1.05
HDAC4-212ENST00000495497 CXXC1Q9P0U4 656 aaPredicted RBP21.63■■□□□ 1.05
HDAC4-212ENST00000495497 RCOR1Q9UKL0 485 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms