RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 CACNA2D2Q9NY47 1150 aa10.42□□□□□ -0.74
GARNL3-219ENST00000495172 KLK13Q9UKR3 277 aa10.42□□□□□ -0.74
GARNL3-219ENST00000495172 SYNPO2Q9UMS6 1093 aa10.42□□□□□ -0.74
GARNL3-219ENST00000495172 PLIN4Q96Q06 1357 aa10.41□□□□□ -0.74
GARNL3-219ENST00000495172 NRCAMQ92823 1304 aa10.41□□□□□ -0.74
GARNL3-219ENST00000495172 B4DLN1 442 aa10.41□□□□□ -0.74
GARNL3-219ENST00000495172 PYCARD-AS1I3L0S3 204 aa10.41□□□□□ -0.74
GARNL3-219ENST00000495172 AXIN1O15169 862 aa10.41□□□□□ -0.74
GARNL3-219ENST00000495172 HYAL3O43820 417 aaPredicted RBP10.41□□□□□ -0.74
GARNL3-219ENST00000495172 LRP3O75074 770 aa10.41□□□□□ -0.74
GARNL3-219ENST00000495172 EIF3JO75822 258 aaKnown RBP10.41□□□□□ -0.74
GARNL3-219ENST00000495172 C1QL1O75973 258 aa10.41□□□□□ -0.74
GARNL3-219ENST00000495172 GNAT1P11488 350 aa10.41□□□□□ -0.74
GARNL3-219ENST00000495172 MARK3P27448 753 aa10.41□□□□□ -0.74
GARNL3-219ENST00000495172 MRPL12P52815 198 aaKnown RBP10.41□□□□□ -0.74
GARNL3-219ENST00000495172 NFX1Q12986 1120 aaKnown RBP10.41□□□□□ -0.74
GARNL3-219ENST00000495172 PAK2Q13177 524 aa10.41□□□□□ -0.74
GARNL3-219ENST00000495172 FZD5Q13467 585 aa10.41□□□□□ -0.74
GARNL3-219ENST00000495172 HTR4Q13639 388 aa10.41□□□□□ -0.74
GARNL3-219ENST00000495172 MLF2Q15773 248 aaPredicted RBP10.41□□□□□ -0.74
GARNL3-219ENST00000495172 MARCH8Q5T0T0 291 aa10.41□□□□□ -0.74
GARNL3-219ENST00000495172 TCEAL6Q6IPX3 200 aa10.41□□□□□ -0.74
GARNL3-219ENST00000495172 BTNL9Q6UXG8 535 aa10.41□□□□□ -0.74
GARNL3-219ENST00000495172 SSH3Q8TE77 659 aa10.41□□□□□ -0.74
GARNL3-219ENST00000495172 BCL7CQ8WUZ0 217 aaPredicted RBP10.41□□□□□ -0.74
GARNL3-219ENST00000495172 TCEAL3Q969E4 200 aa10.41□□□□□ -0.74
GARNL3-219ENST00000495172 CRELD1Q96HD1 420 aa10.41□□□□□ -0.74
GARNL3-219ENST00000495172 ZNF558Q96NG5 402 aa10.41□□□□□ -0.74
GARNL3-219ENST00000495172 STRBPQ96SI9 672 aaKnown RBP10.41□□□□□ -0.74
GARNL3-219ENST00000495172 ADAM2Q99965 735 aa10.41□□□□□ -0.74
GARNL3-219ENST00000495172 DDX23Q9BUQ8 820 aaKnown RBP10.41□□□□□ -0.74
GARNL3-219ENST00000495172 API5Q9BZZ5 524 aaKnown RBP10.41□□□□□ -0.74
GARNL3-219ENST00000495172 ARRDC1-AS1Q9H2J1 176 aa10.41□□□□□ -0.74
GARNL3-219ENST00000495172 BOLA2Q9H3K6 86 aa10.41□□□□□ -0.74
GARNL3-219ENST00000495172 SFXN1Q9H9B4 322 aa10.41□□□□□ -0.74
GARNL3-219ENST00000495172 PXMP2Q9NR77 195 aa10.41□□□□□ -0.74
GARNL3-219ENST00000495172 SLC2A4RGQ9NR83 387 aa10.41□□□□□ -0.74
GARNL3-219ENST00000495172 SPG21Q9NZD8 308 aa10.41□□□□□ -0.74
GARNL3-219ENST00000495172 EXOC6BQ9Y2D4 811 aa10.41□□□□□ -0.74
GARNL3-219ENST00000495172 CHURC1-FNTBB4DL54 471 aa10.4□□□□□ -0.74
GARNL3-219ENST00000495172 RFPL2O75678 378 aa10.4□□□□□ -0.74
GARNL3-219ENST00000495172 PLA2G2AP14555 144 aa10.4□□□□□ -0.74
GARNL3-219ENST00000495172 CD44P16070 742 aaKnown RBP10.4□□□□□ -0.74
GARNL3-219ENST00000495172 FNTBP49356 437 aa10.4□□□□□ -0.74
GARNL3-219ENST00000495172 KRT17Q04695 432 aa10.4□□□□□ -0.74
GARNL3-219ENST00000495172 SLC44A4Q53GD3 710 aa10.4□□□□□ -0.74
GARNL3-219ENST00000495172 HEATR6Q6AI08 1181 aaKnown RBP10.4□□□□□ -0.74
GARNL3-219ENST00000495172 PARM1Q6UWI2 310 aa10.4□□□□□ -0.74
GARNL3-219ENST00000495172 GET4Q7L5D6 327 aaPredicted RBP10.4□□□□□ -0.74
GARNL3-219ENST00000495172 VPS52Q8N1B4 723 aa10.4□□□□□ -0.74
GARNL3-219ENST00000495172 SLC39A11Q8N1S5 342 aa10.4□□□□□ -0.74
GARNL3-219ENST00000495172 FAM160A2Q8N612 972 aaPredicted RBP10.4□□□□□ -0.74
GARNL3-219ENST00000495172 CELF5Q8N6W0 485 aaKnown RBP10.4□□□□□ -0.74
GARNL3-219ENST00000495172 HNRNPLLQ8WVV9 542 aaKnown RBP10.4□□□□□ -0.74
GARNL3-219ENST00000495172 FGF14Q92915 247 aa10.4□□□□□ -0.74
GARNL3-219ENST00000495172 LRIG1Q96JA1 1093 aa10.4□□□□□ -0.74
GARNL3-219ENST00000495172 CASD1Q96PB1 797 aa10.4□□□□□ -0.74
GARNL3-219ENST00000495172 CDHR5Q9HBB8 845 aa10.4□□□□□ -0.74
GARNL3-219ENST00000495172 PAG1Q9NWQ8 432 aa10.4□□□□□ -0.74
GARNL3-219ENST00000495172 EPS15L1Q9UBC2 864 aa10.4□□□□□ -0.74
GARNL3-219ENST00000495172 SPTA1P02549 2419 aa10.4□□□□□ -0.74
GARNL3-219ENST00000495172 CLUHO75153 1309 aa10.39□□□□□ -0.75
GARNL3-219ENST00000495172 CCDC171Q6TFL3 1326 aa10.39□□□□□ -0.75
GARNL3-219ENST00000495172 SHISA7A6NL88 538 aa10.39□□□□□ -0.75
GARNL3-219ENST00000495172 SSBP05455 408 aaKnown RBP eCLIP10.39□□□□□ -0.75
GARNL3-219ENST00000495172 GOLGA8HP0CJ92 632 aa10.39□□□□□ -0.75
GARNL3-219ENST00000495172 LIMK1P53667 647 aa10.39□□□□□ -0.75
GARNL3-219ENST00000495172 ADCY1Q08828 1119 aa10.39□□□□□ -0.75
GARNL3-219ENST00000495172 NONOQ15233 471 aaKnown RBP eCLIP10.39□□□□□ -0.75
GARNL3-219ENST00000495172 ALDH1L2Q3SY69 923 aa10.39□□□□□ -0.75
GARNL3-219ENST00000495172 CYFIP1Q7L576 1253 aa10.39□□□□□ -0.75
GARNL3-219ENST00000495172 C12orf50Q8NA57 414 aaPredicted RBP10.39□□□□□ -0.75
GARNL3-219ENST00000495172 TMEM87AQ8NBN3 555 aa10.39□□□□□ -0.75
GARNL3-219ENST00000495172 TRAPPC12Q8WVT3 735 aa10.39□□□□□ -0.75
GARNL3-219ENST00000495172 GLG1Q92896 1179 aa10.39□□□□□ -0.75
GARNL3-219ENST00000495172 IWS1Q96ST2 819 aa10.39□□□□□ -0.75
GARNL3-219ENST00000495172 PPP1R16BQ96T49 567 aa10.39□□□□□ -0.75
GARNL3-219ENST00000495172 FTHL17Q9BXU8 183 aa10.39□□□□□ -0.75
GARNL3-219ENST00000495172 ZBP1Q9H171 429 aa10.39□□□□□ -0.75
GARNL3-219ENST00000495172 FAM217BQ9NTX9 383 aaPredicted RBP10.39□□□□□ -0.75
GARNL3-219ENST00000495172 TUBE1Q9UJT0 475 aa10.39□□□□□ -0.75
GARNL3-219ENST00000495172 GINS2Q9Y248 185 aa10.39□□□□□ -0.75
GARNL3-219ENST00000495172 C9IYK1 514 aa10.38□□□□□ -0.75
GARNL3-219ENST00000495172 ANHXE9PGG2 379 aa10.38□□□□□ -0.75
GARNL3-219ENST00000495172 NOP56O00567 594 aaKnown RBP10.38□□□□□ -0.75
GARNL3-219ENST00000495172 SEC24BO95487 1268 aa10.38□□□□□ -0.75
GARNL3-219ENST00000495172 LAMP2P13473 410 aa10.38□□□□□ -0.75
GARNL3-219ENST00000495172 TDO2P48775 406 aa10.38□□□□□ -0.75
GARNL3-219ENST00000495172 PPFIA1Q13136 1202 aa10.38□□□□□ -0.75
GARNL3-219ENST00000495172 GRIK4Q16099 956 aa10.38□□□□□ -0.75
GARNL3-219ENST00000495172 SH3PXD2AQ5TCZ1 1133 aa10.38□□□□□ -0.75
GARNL3-219ENST00000495172 DCAF4Q8WV16 495 aa10.38□□□□□ -0.75
GARNL3-219ENST00000495172 TMEM40Q8WWA1 233 aa10.38□□□□□ -0.75
GARNL3-219ENST00000495172 CLDN23Q96B33 292 aa10.38□□□□□ -0.75
GARNL3-219ENST00000495172 BORCS6Q96GS4 357 aa10.38□□□□□ -0.75
GARNL3-219ENST00000495172 SHDQ96IW2 340 aa10.38□□□□□ -0.75
GARNL3-219ENST00000495172 VN1R3Q9BXE9 311 aa10.38□□□□□ -0.75
GARNL3-219ENST00000495172 UBA5Q9GZZ9 404 aa10.38□□□□□ -0.75
GARNL3-219ENST00000495172 WDR6Q9NNW5 1121 aaKnown RBP10.38□□□□□ -0.75
GARNL3-219ENST00000495172 NOP58Q9Y2X3 529 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms