RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 TM4SF4P48230 202 aa8.72□□□□□ -1.01
RPGR-210ENST00000494841 NT5C2P49902 561 aa8.72□□□□□ -1.01
RPGR-210ENST00000494841 NEK4P51957 841 aa8.72□□□□□ -1.01
RPGR-210ENST00000494841 USP14P54578 494 aa8.72□□□□□ -1.01
RPGR-210ENST00000494841 ID3Q02535 119 aa8.72□□□□□ -1.01
RPGR-210ENST00000494841 APOBRQ0VD83 1088 aa8.72□□□□□ -1.01
RPGR-210ENST00000494841 NOGQ13253 232 aa8.72□□□□□ -1.01
RPGR-210ENST00000494841 PWP1Q13610 501 aa8.72□□□□□ -1.01
RPGR-210ENST00000494841 DOC2BQ14184 412 aa8.72□□□□□ -1.01
RPGR-210ENST00000494841 SART3Q15020 963 aaKnown RBP8.72□□□□□ -1.01
RPGR-210ENST00000494841 CCDC178Q5BJE1 867 aa8.72□□□□□ -1.01
RPGR-210ENST00000494841 ZC3H12AQ5D1E8 599 aaKnown RBP8.72□□□□□ -1.01
RPGR-210ENST00000494841 NFXL1Q6ZNB6 911 aa8.72□□□□□ -1.01
RPGR-210ENST00000494841 FASTKD5Q7L8L6 764 aaKnown RBP8.72□□□□□ -1.01
RPGR-210ENST00000494841 RELL1Q8IUW5 271 aa8.72□□□□□ -1.01
RPGR-210ENST00000494841 FAM43AQ8N2R8 423 aa8.72□□□□□ -1.01
RPGR-210ENST00000494841 BRF1Q92994 677 aa8.72□□□□□ -1.01
RPGR-210ENST00000494841 RNF34Q969K3 372 aa8.72□□□□□ -1.01
RPGR-210ENST00000494841 UTP4Q969X6 686 aaKnown RBP8.72□□□□□ -1.01
RPGR-210ENST00000494841 IL17RAQ96F46 866 aa8.72□□□□□ -1.01
RPGR-210ENST00000494841 MYRFLQ96LU7 910 aa8.72□□□□□ -1.01
RPGR-210ENST00000494841 MYL10Q9BUA6 226 aa8.72□□□□□ -1.01
RPGR-210ENST00000494841 GSX1Q9H4S2 264 aaPredicted RBP8.72□□□□□ -1.01
RPGR-210ENST00000494841 VCPKMTQ9H867 229 aa8.72□□□□□ -1.01
RPGR-210ENST00000494841 KAT14Q9H8E8 782 aa8.72□□□□□ -1.01
RPGR-210ENST00000494841 CRIM1Q9NZV1 1036 aa8.72□□□□□ -1.01
RPGR-210ENST00000494841 ACTL7BQ9Y614 415 aa8.72□□□□□ -1.01
RPGR-210ENST00000494841 CCDC69A6NI79 296 aa8.71□□□□□ -1.02
RPGR-210ENST00000494841 PDHXO00330 501 aa8.71□□□□□ -1.02
RPGR-210ENST00000494841 GAS2O43903 313 aaKnown RBP8.71□□□□□ -1.02
RPGR-210ENST00000494841 PF4P02776 101 aa8.71□□□□□ -1.02
RPGR-210ENST00000494841 SLFN14P0C7P3 912 aa8.71□□□□□ -1.02
RPGR-210ENST00000494841 VCAM1P19320 739 aa8.71□□□□□ -1.02
RPGR-210ENST00000494841 LIFRP42702 1097 aa8.71□□□□□ -1.02
RPGR-210ENST00000494841 AK2P54819 239 aa8.71□□□□□ -1.02
RPGR-210ENST00000494841 LMNB2Q03252 620 aa8.71□□□□□ -1.02
RPGR-210ENST00000494841 CAMK2GQ13555 558 aaPredicted RBP8.71□□□□□ -1.02
RPGR-210ENST00000494841 TOB2Q14106 344 aaPredicted RBP8.71□□□□□ -1.02
RPGR-210ENST00000494841 FAM83BQ5T0W9 1011 aa8.71□□□□□ -1.02
RPGR-210ENST00000494841 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.71□□□□□ -1.02
RPGR-210ENST00000494841 KCTD1Q719H9 257 aa8.71□□□□□ -1.02
RPGR-210ENST00000494841 NOL8Q76FK4 1167 aaKnown RBP8.71□□□□□ -1.02
RPGR-210ENST00000494841 TRIM42Q8IWZ5 723 aa8.71□□□□□ -1.02
RPGR-210ENST00000494841 CCDC144CPQ8IYA2 1237 aa8.71□□□□□ -1.02
RPGR-210ENST00000494841 GMCL1P1Q8NEA9 526 aa8.71□□□□□ -1.02
RPGR-210ENST00000494841 NUP133Q8WUM0 1156 aa8.71□□□□□ -1.02
RPGR-210ENST00000494841 MIR1-1HGQ9H1L0 117 aa8.71□□□□□ -1.02
RPGR-210ENST00000494841 CPVLQ9H3G5 476 aa8.71□□□□□ -1.02
RPGR-210ENST00000494841 RPAP3Q9H6T3 665 aaPredicted RBP8.71□□□□□ -1.02
RPGR-210ENST00000494841 SH2D4AQ9H788 454 aa8.71□□□□□ -1.02
RPGR-210ENST00000494841 FBXO28Q9NVF7 368 aa8.71□□□□□ -1.02
RPGR-210ENST00000494841 ISY1Q9ULR0 285 aaKnown RBP8.71□□□□□ -1.02
RPGR-210ENST00000494841 NAP1L2Q9ULW6 460 aaPredicted RBP8.71□□□□□ -1.02
RPGR-210ENST00000494841 PCDHA4Q9UN74 947 aa8.71□□□□□ -1.02
RPGR-210ENST00000494841 FRMPD2Q68DX3 1309 aaPredicted RBP8.71□□□□□ -1.02
RPGR-210ENST00000494841 WDR19Q8NEZ3 1342 aa8.71□□□□□ -1.02
RPGR-210ENST00000494841 KLF18A0A0U1RQI7 1052 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 PEX10O60683 326 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 DTNBO60941 627 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 CYP2C8P10632 490 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 PDHBP11177 359 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 BMP3P12645 472 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 GARTP22102 1010 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 SLC16A2P36021 539 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 MAP2K2P36507 400 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 SLC1A4P43007 532 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 INHBEP58166 350 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 SREBF2Q12772 1141 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 TROAPQ12815 778 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 CATSPERGQ6ZRH7 1159 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 DYMQ7RTS9 669 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 CATIPQ7Z7H3 387 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 SGMS1Q86VZ5 419 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 FAM20CQ8IXL6 584 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 ZNF654Q8IZM8 581 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 TMTC2Q8N394 836 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 C12orf42Q96LP6 360 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 P2RX7Q99572 595 aaKnown RBP8.7□□□□□ -1.02
RPGR-210ENST00000494841 MTA3Q9BTC8 594 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 TANGO6Q9C0B7 1094 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 UBA5Q9GZZ9 404 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 FAM105AQ9NUU6 356 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 AGTPBP1Q9UPW5 1226 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 HIF3AQ9Y2N7 669 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 SLC12A7Q9Y666 1083 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 BAZ2BQ9UIF8 2168 aaKnown RBP8.7□□□□□ -1.02
RPGR-210ENST00000494841 LOC285556D6RIA3 1793 aa8.7□□□□□ -1.02
RPGR-210ENST00000494841 TMEM232C9JQI7 657 aa8.69□□□□□ -1.02
RPGR-210ENST00000494841 WDR46O15213 610 aaKnown RBP8.69□□□□□ -1.02
RPGR-210ENST00000494841 SNHG28P0DPA3 235 aa8.69□□□□□ -1.02
RPGR-210ENST00000494841 HOXA7P31268 230 aaPredicted RBP8.69□□□□□ -1.02
RPGR-210ENST00000494841 SNAP25P60880 206 aa8.69□□□□□ -1.02
RPGR-210ENST00000494841 FAM160A1Q05DH4 1040 aa8.69□□□□□ -1.02
RPGR-210ENST00000494841 STK3Q13188 491 aa8.69□□□□□ -1.02
RPGR-210ENST00000494841 CCDC96Q2M329 555 aa8.69□□□□□ -1.02
RPGR-210ENST00000494841 ZNF394Q53GI3 561 aa8.69□□□□□ -1.02
RPGR-210ENST00000494841 SGO2Q562F6 1265 aa8.69□□□□□ -1.02
RPGR-210ENST00000494841 LRFN4Q6PJG9 635 aa8.69□□□□□ -1.02
RPGR-210ENST00000494841 BNC2Q6ZN30 1099 aaPredicted RBP8.69□□□□□ -1.02
RPGR-210ENST00000494841 ANKRD23Q86SG2 305 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms