RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 AKR1B10O60218 316 aa11.41□□□□□ -0.58
SAMM50-206ENST00000494795 ZNF862O60290 1169 aa11.41□□□□□ -0.58
SAMM50-206ENST00000494795 ZMYND10O75800 440 aa11.41□□□□□ -0.58
SAMM50-206ENST00000494795 SASH3O75995 380 aa11.41□□□□□ -0.58
SAMM50-206ENST00000494795 VGLL4Q14135 290 aa11.41□□□□□ -0.58
SAMM50-206ENST00000494795 ZNF397Q8NF99 534 aaPredicted RBP11.41□□□□□ -0.58
SAMM50-206ENST00000494795 NACC1Q96RE7 527 aa11.41□□□□□ -0.58
SAMM50-206ENST00000494795 CBWD1Q9BRT8 395 aa11.41□□□□□ -0.58
SAMM50-206ENST00000494795 A1CFQ9NQ94 594 aaKnown RBP11.41□□□□□ -0.58
SAMM50-206ENST00000494795 PACSIN2Q9UNF0 486 aaPredicted RBP11.41□□□□□ -0.58
SAMM50-206ENST00000494795 HNRNPH3P31942 346 aaKnown RBP11.41□□□□□ -0.58
SAMM50-206ENST00000494795 MARSP56192 900 aaKnown RBP11.41□□□□□ -0.58
SAMM50-206ENST00000494795 EDRF1Q3B7T1 1238 aa11.41□□□□□ -0.58
SAMM50-206ENST00000494795 MCTP2Q6DN12 878 aa11.41□□□□□ -0.58
SAMM50-206ENST00000494795 ANO5Q75V66 913 aa11.41□□□□□ -0.58
SAMM50-206ENST00000494795 COG1Q8WTW3 980 aa11.41□□□□□ -0.58
SAMM50-206ENST00000494795 DEF6Q9H4E7 631 aa11.41□□□□□ -0.58
SAMM50-206ENST00000494795 PLEKHA4Q9H4M7 779 aa11.41□□□□□ -0.58
SAMM50-206ENST00000494795 TYW1Q9NV66 732 aaKnown RBP11.41□□□□□ -0.58
SAMM50-206ENST00000494795 CTDP1Q9Y5B0 961 aaPredicted RBP11.41□□□□□ -0.58
SAMM50-206ENST00000494795 MYH11P35749 1972 aa11.41□□□□□ -0.58
SAMM50-206ENST00000494795 GOLGA8IPA6NC78 632 aa11.41□□□□□ -0.58
SAMM50-206ENST00000494795 GOLGA8JA6NMD2 632 aa11.41□□□□□ -0.58
SAMM50-206ENST00000494795 SPDYE16A6NNV3 312 aaPredicted RBP11.41□□□□□ -0.58
SAMM50-206ENST00000494795 EFCAB8A8MWE9 144 aa11.41□□□□□ -0.58
SAMM50-206ENST00000494795 PDXKO00764 312 aa11.41□□□□□ -0.58
SAMM50-206ENST00000494795 NR3C2P08235 984 aa11.41□□□□□ -0.58
SAMM50-206ENST00000494795 YWHABP31946 246 aaKnown RBP11.41□□□□□ -0.58
SAMM50-206ENST00000494795 CHMP4BP1P59074 171 aa11.41□□□□□ -0.58
SAMM50-206ENST00000494795 PLEKHO2Q8TD55 490 aa11.41□□□□□ -0.58
SAMM50-206ENST00000494795 BSNDQ8WZ55 320 aa11.41□□□□□ -0.58
SAMM50-206ENST00000494795 HAUS4Q9H6D7 363 aa11.41□□□□□ -0.58
SAMM50-206ENST00000494795 OLFML3Q9NRN5 406 aa11.41□□□□□ -0.58
SAMM50-206ENST00000494795 AGPAT3Q9NRZ7 376 aa11.41□□□□□ -0.58
SAMM50-206ENST00000494795 CGNQ9P2M7 1197 aaKnown RBP11.41□□□□□ -0.58
SAMM50-206ENST00000494795 SLC16A4O15374 487 aa11.4□□□□□ -0.58
SAMM50-206ENST00000494795 ZBED4O75132 1171 aa11.4□□□□□ -0.58
SAMM50-206ENST00000494795 FGFR1OPO95684 399 aaKnown RBP11.4□□□□□ -0.58
SAMM50-206ENST00000494795 UCHL3P15374 230 aa11.4□□□□□ -0.58
SAMM50-206ENST00000494795 DSG3P32926 999 aa11.4□□□□□ -0.58
SAMM50-206ENST00000494795 CYLC1P35663 651 aaPredicted RBP11.4□□□□□ -0.58
SAMM50-206ENST00000494795 ZNF131P52739 623 aa11.4□□□□□ -0.58
SAMM50-206ENST00000494795 SETQ01105 290 aaPredicted RBP11.4□□□□□ -0.58
SAMM50-206ENST00000494795 BMT2Q1RMZ1 405 aa11.4□□□□□ -0.58
SAMM50-206ENST00000494795 RIT2Q99578 217 aa11.4□□□□□ -0.58
SAMM50-206ENST00000494795 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.4□□□□□ -0.58
SAMM50-206ENST00000494795 MYO6Q9UM54 1294 aa11.4□□□□□ -0.58
SAMM50-206ENST00000494795 AFG3L2Q9Y4W6 797 aa11.4□□□□□ -0.58
SAMM50-206ENST00000494795 PHIPQ8WWQ0 1821 aa11.4□□□□□ -0.58
SAMM50-206ENST00000494795 K7ENM7 598 aa11.4□□□□□ -0.58
SAMM50-206ENST00000494795 XRCC5P13010 732 aaKnown RBP11.4□□□□□ -0.58
SAMM50-206ENST00000494795 YBX3P16989 372 aaKnown RBP eCLIP11.4□□□□□ -0.58
SAMM50-206ENST00000494795 VAV2P52735 878 aa11.4□□□□□ -0.58
SAMM50-206ENST00000494795 PTK2Q05397 1052 aa11.4□□□□□ -0.58
SAMM50-206ENST00000494795 TMEM63BQ5T3F8 832 aa11.4□□□□□ -0.58
SAMM50-206ENST00000494795 EEPD1Q7L9B9 569 aa11.4□□□□□ -0.58
SAMM50-206ENST00000494795 ZNF571Q7Z3V5 609 aaPredicted RBP11.4□□□□□ -0.58
SAMM50-206ENST00000494795 SNCAIPQ9Y6H5 919 aa11.4□□□□□ -0.58
SAMM50-206ENST00000494795 LTBP3Q9NS15 1303 aa11.4□□□□□ -0.58
SAMM50-206ENST00000494795 DOCK1Q14185 1865 aa11.4□□□□□ -0.59
SAMM50-206ENST00000494795 P4HBP07237 508 aaKnown RBP11.39□□□□□ -0.59
SAMM50-206ENST00000494795 PEX3P56589 373 aa11.39□□□□□ -0.59
SAMM50-206ENST00000494795 NFRKBQ6P4R8 1299 aa11.39□□□□□ -0.59
SAMM50-206ENST00000494795 TRAPPC11Q7Z392 1133 aa11.39□□□□□ -0.59
SAMM50-206ENST00000494795 SRGAP1Q7Z6B7 1085 aa11.39□□□□□ -0.59
SAMM50-206ENST00000494795 UPF1Q92900 1129 aaKnown RBP eCLIP11.39□□□□□ -0.59
SAMM50-206ENST00000494795 ACP6Q9NPH0 428 aa11.39□□□□□ -0.59
SAMM50-206ENST00000494795 BTBD7Q9P203 1132 aa11.39□□□□□ -0.59
SAMM50-206ENST00000494795 CEP72Q9P209 647 aa11.39□□□□□ -0.59
SAMM50-206ENST00000494795 DDX41Q9UJV9 622 aaKnown RBP11.39□□□□□ -0.59
SAMM50-206ENST00000494795 KIAA1217Q5T5P2 1943 aa11.39□□□□□ -0.59
SAMM50-206ENST00000494795 AFPP02771 609 aaKnown RBP11.39□□□□□ -0.59
SAMM50-206ENST00000494795 TUBB4AP04350 444 aa11.39□□□□□ -0.59
SAMM50-206ENST00000494795 KLRC1P26715 233 aa11.39□□□□□ -0.59
SAMM50-206ENST00000494795 KLHDC7AQ5VTJ3 777 aa11.39□□□□□ -0.59
SAMM50-206ENST00000494795 SFMBT2Q5VUG0 894 aa11.39□□□□□ -0.59
SAMM50-206ENST00000494795 CATSPERGQ6ZRH7 1159 aa11.39□□□□□ -0.59
SAMM50-206ENST00000494795 IRF2BP2Q7Z5L9 587 aa11.39□□□□□ -0.59
SAMM50-206ENST00000494795 MCF2L2Q86YR7 1114 aa11.39□□□□□ -0.59
SAMM50-206ENST00000494795 FAM186BQ8IYM0 893 aa11.39□□□□□ -0.59
SAMM50-206ENST00000494795 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.39□□□□□ -0.59
SAMM50-206ENST00000494795 POP1Q99575 1024 aaKnown RBP11.39□□□□□ -0.59
SAMM50-206ENST00000494795 CYP39A1Q9NYL5 469 aa11.39□□□□□ -0.59
SAMM50-206ENST00000494795 GCNT4Q9P109 453 aa11.39□□□□□ -0.59
SAMM50-206ENST00000494795 PPP1R37O75864 691 aa11.39□□□□□ -0.59
SAMM50-206ENST00000494795 MAGEA1P43355 309 aa11.39□□□□□ -0.59
SAMM50-206ENST00000494795 QARSP47897 775 aaKnown RBP11.39□□□□□ -0.59
SAMM50-206ENST00000494795 EXOC3L4Q17RC7 722 aa11.39□□□□□ -0.59
SAMM50-206ENST00000494795 SCARA3Q6AZY7 606 aa11.39□□□□□ -0.59
SAMM50-206ENST00000494795 VSIG10LQ86VR7 867 aa11.39□□□□□ -0.59
SAMM50-206ENST00000494795 CCDC170Q8IYT3 715 aa11.39□□□□□ -0.59
SAMM50-206ENST00000494795 STRA6Q9BX79 667 aa11.39□□□□□ -0.59
SAMM50-206ENST00000494795 PFASO15067 1338 aa11.38□□□□□ -0.59
SAMM50-206ENST00000494795 ADGRA3Q8IWK6 1321 aa11.38□□□□□ -0.59
SAMM50-206ENST00000494795 ANKRD63C9JTQ0 380 aa11.38□□□□□ -0.59
SAMM50-206ENST00000494795 IRF6O14896 467 aa11.38□□□□□ -0.59
SAMM50-206ENST00000494795 CALUO43852 315 aaPredicted RBP11.38□□□□□ -0.59
SAMM50-206ENST00000494795 CALCAP01258 141 aa11.38□□□□□ -0.59
SAMM50-206ENST00000494795 BCRP11274 1271 aa11.38□□□□□ -0.59
SAMM50-206ENST00000494795 KRT83P78385 493 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms