RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 ZC3H4Q9UPT8 1303 aaKnown RBP11.67□□□□□ -0.54
PRPF4B-209ENST00000494674 EIF3CLB5ME19 914 aaKnown RBP11.67□□□□□ -0.54
PRPF4B-209ENST00000494674 PLS3P13797 630 aa11.67□□□□□ -0.54
PRPF4B-209ENST00000494674 EDNRBP24530 442 aa11.67□□□□□ -0.54
PRPF4B-209ENST00000494674 ICAM3P32942 547 aa11.67□□□□□ -0.54
PRPF4B-209ENST00000494674 ALDH5A1P51649 535 aaPredicted RBP11.67□□□□□ -0.54
PRPF4B-209ENST00000494674 NPEPPSP55786 919 aa11.67□□□□□ -0.54
PRPF4B-209ENST00000494674 SP2Q02086 613 aa11.67□□□□□ -0.54
PRPF4B-209ENST00000494674 PPP2R3AQ06190 1150 aa11.67□□□□□ -0.54
PRPF4B-209ENST00000494674 NAA30Q147X3 362 aaPredicted RBP11.67□□□□□ -0.54
PRPF4B-209ENST00000494674 HGSNATQ68CP4 663 aa11.67□□□□□ -0.54
PRPF4B-209ENST00000494674 DPY19L2Q6NUT2 758 aa11.67□□□□□ -0.54
PRPF4B-209ENST00000494674 ZNF662Q6ZS27 426 aa11.67□□□□□ -0.54
PRPF4B-209ENST00000494674 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.67□□□□□ -0.54
PRPF4B-209ENST00000494674 SMAP1Q8IYB5 467 aaPredicted RBP11.67□□□□□ -0.54
PRPF4B-209ENST00000494674 CCDC170Q8IYT3 715 aa11.67□□□□□ -0.54
PRPF4B-209ENST00000494674 ZNF397Q8NF99 534 aaPredicted RBP11.67□□□□□ -0.54
PRPF4B-209ENST00000494674 NEK11Q8NG66 645 aa11.67□□□□□ -0.54
PRPF4B-209ENST00000494674 ANKRD7Q92527 254 aa11.67□□□□□ -0.54
PRPF4B-209ENST00000494674 CDHR1Q96JP9 859 aa11.67□□□□□ -0.54
PRPF4B-209ENST00000494674 EIF3CQ99613 913 aaKnown RBP11.67□□□□□ -0.54
PRPF4B-209ENST00000494674 CRACR2AQ9BSW2 395 aa11.67□□□□□ -0.54
PRPF4B-209ENST00000494674 LSM14BQ9BX40 385 aaKnown RBP11.67□□□□□ -0.54
PRPF4B-209ENST00000494674 ST6GALNAC4Q9H4F1 302 aa11.67□□□□□ -0.54
PRPF4B-209ENST00000494674 TAF1DQ9H5J8 278 aaPredicted RBP11.67□□□□□ -0.54
PRPF4B-209ENST00000494674 JPH1Q9HDC5 661 aaPredicted RBP11.67□□□□□ -0.54
PRPF4B-209ENST00000494674 AGTPBP1Q9UPW5 1226 aa11.67□□□□□ -0.54
PRPF4B-209ENST00000494674 IGSF9BQ9UPX0 1349 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 RCCD1A6NED2 376 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 SOWAHBA6NEL2 793 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 GLTPD2A6NH11 291 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 TLR2O60603 784 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 SLU7O95391 586 aaKnown RBP11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 LCA5LO95447 670 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 AFPP02771 609 aaKnown RBP11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 EPB41P11171 864 aaKnown RBP11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 GJA5P36382 358 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 TSR1Q2NL82 804 aaKnown RBP11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 LDLRAD1Q5T700 205 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 ABHD15Q6UXT9 468 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 STXBP4Q6ZWJ1 553 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 RRAGAQ7L523 313 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 MAEAQ7L5Y9 396 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 SLC9A9Q8IVB4 645 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 CCDC60Q8IWA6 550 aaPredicted RBP11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 FAM133AQ8N9E0 248 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 ZNF526Q8TF50 670 aaPredicted RBP11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 TMEM174Q8WUU8 243 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 MKNK1Q9BUB5 465 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 TIPINQ9BVW5 301 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 GBP3Q9H0R5 595 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 METTL14Q9HCE5 456 aaKnown RBP11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 GPRC5CQ9NQ84 441 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 ZNHIT6Q9NWK9 470 aaKnown RBP11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 TRIM10Q9UDY6 481 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 FBXO40Q9UH90 709 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 TFR2Q9UP52 801 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 PCDHB13Q9Y5F0 798 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 PLXNA1Q9UIW2 1896 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 MYH10P35580 1976 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 K7ENM7 598 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 EIF3JO75822 258 aaKnown RBP11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 XRCC5P13010 732 aaKnown RBP11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 CASQ1P31415 396 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 NF2P35240 595 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 NCKAP1LP55160 1127 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 ACTR2P61160 394 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 IRX3P78415 501 aaPredicted RBP11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 GTF2BQ00403 316 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 ASTE1Q2TB18 679 aaPredicted RBP11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 GNPTABQ3T906 1256 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 ARHGAP29Q52LW3 1261 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 XKR9Q5GH70 373 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 GPAT2Q6NUI2 795 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 ANKRD35Q8N283 1001 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 SYN2Q92777 582 aaPredicted RBP11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 OPTNQ96CV9 577 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 ERO1AQ96HE7 468 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 FGD4Q96M96 766 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 TXNRD2Q9NNW7 524 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 SIX2Q9NPC8 291 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 PLCB1Q9NQ66 1216 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 PDLIM7Q9NR12 457 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 LARSQ9P2J5 1176 aaKnown RBP11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 GABBR1Q9UBS5 961 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 SLC9A2Q9UBY0 812 aa11.66□□□□□ -0.54
PRPF4B-209ENST00000494674 SYNGAP1Q96PV0 1343 aa11.65□□□□□ -0.54
PRPF4B-209ENST00000494674 PLXNB2O15031 1838 aa11.65□□□□□ -0.54
PRPF4B-209ENST00000494674 TISP43B9A030 160 aa11.65□□□□□ -0.54
PRPF4B-209ENST00000494674 KIF5CO60282 957 aa11.65□□□□□ -0.54
PRPF4B-209ENST00000494674 SLC9A1P19634 815 aa11.65□□□□□ -0.54
PRPF4B-209ENST00000494674 CYLC1P35663 651 aaPredicted RBP11.65□□□□□ -0.54
PRPF4B-209ENST00000494674 PSMC2P35998 433 aaKnown RBP11.65□□□□□ -0.54
PRPF4B-209ENST00000494674 ALCAMQ13740 583 aa11.65□□□□□ -0.54
PRPF4B-209ENST00000494674 MYBPC2Q14324 1141 aa11.65□□□□□ -0.54
PRPF4B-209ENST00000494674 STXBP2Q15833 593 aa11.65□□□□□ -0.54
PRPF4B-209ENST00000494674 HS2ST1Q7LGA3 356 aa11.65□□□□□ -0.54
PRPF4B-209ENST00000494674 C12orf56Q8IXR9 622 aa11.65□□□□□ -0.54
PRPF4B-209ENST00000494674 FAM186BQ8IYM0 893 aa11.65□□□□□ -0.54
PRPF4B-209ENST00000494674 BSNDQ8WZ55 320 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms