RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 TMEM270Q6UE05 265 aa12.59□□□□□ -0.39
COL25A1-204ENST00000494183 HAUS6Q7Z4H7 955 aa12.59□□□□□ -0.39
COL25A1-204ENST00000494183 RUNDC3BQ96NL0 473 aa12.59□□□□□ -0.39
COL25A1-204ENST00000494183 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.59□□□□□ -0.39
COL25A1-204ENST00000494183 CCDC160A6NGH7 325 aa12.59□□□□□ -0.39
COL25A1-204ENST00000494183 LRRC53A6NM62 1247 aa12.59□□□□□ -0.39
COL25A1-204ENST00000494183 MCF2LO15068 1137 aa12.59□□□□□ -0.39
COL25A1-204ENST00000494183 WDR46O15213 610 aaKnown RBP12.59□□□□□ -0.39
COL25A1-204ENST00000494183 TXNP10599 105 aaKnown RBP12.59□□□□□ -0.39
COL25A1-204ENST00000494183 BASP1P80723 227 aaKnown RBP12.59□□□□□ -0.39
COL25A1-204ENST00000494183 RNF139Q8WU17 664 aa12.59□□□□□ -0.39
COL25A1-204ENST00000494183 HPS3Q969F9 1004 aa12.59□□□□□ -0.39
COL25A1-204ENST00000494183 PHF20Q9BVI0 1012 aa12.59□□□□□ -0.39
COL25A1-204ENST00000494183 FBXO2Q9UK22 296 aaPredicted RBP12.59□□□□□ -0.39
COL25A1-204ENST00000494183 TYW5A2RUC4 315 aaKnown RBP12.58□□□□□ -0.39
COL25A1-204ENST00000494183 ECEL1O95672 775 aa12.58□□□□□ -0.39
COL25A1-204ENST00000494183 TPD52P55327 224 aaPredicted RBP12.58□□□□□ -0.39
COL25A1-204ENST00000494183 PDIA5Q14554 519 aa12.58□□□□□ -0.39
COL25A1-204ENST00000494183 USP49Q70CQ1 688 aa12.58□□□□□ -0.39
COL25A1-204ENST00000494183 BBS5Q8N3I7 341 aa12.58□□□□□ -0.39
COL25A1-204ENST00000494183 CDKL2Q92772 493 aa12.58□□□□□ -0.39
COL25A1-204ENST00000494183 SLC9A2Q9UBY0 812 aa12.58□□□□□ -0.39
COL25A1-204ENST00000494183 MAGED2Q9UNF1 606 aaPredicted RBP12.58□□□□□ -0.39
COL25A1-204ENST00000494183 TRIM49P0CI25 452 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 TRIM49CP0CI26 452 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 TRIP13Q15645 432 aaPredicted RBP12.58□□□□□ -0.4
COL25A1-204ENST00000494183 PASD1Q8IV76 773 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 TMEM35BQ8NCS4 154 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 SLC16A10Q8TF71 515 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 TRIM9Q9C026 710 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 PDE11AQ9HCR9 933 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 RNF14Q9UBS8 474 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 CPSF3Q9UKF6 684 aaKnown RBP12.58□□□□□ -0.4
COL25A1-204ENST00000494183 TROVE2P10155 538 aaKnown RBP eCLIP12.58□□□□□ -0.4
COL25A1-204ENST00000494183 GBP1P32455 592 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 STAT5BP51692 787 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 VAMP7P51809 220 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 ADCY1Q08828 1119 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 C2orf54Q08AI8 447 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 NAALADL2Q58DX5 795 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 AP1M1Q9BXS5 423 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 CCSER1Q9C0I3 900 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 FAM114A2Q9NRY5 505 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 ABHD10Q9NUJ1 306 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 SLC12A6Q9UHW9 1150 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 TNPO2O14787 897 aaKnown RBP12.58□□□□□ -0.4
COL25A1-204ENST00000494183 INHBAP08476 426 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 ELF1P32519 619 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 RPS6KA2Q15349 733 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 ZNF699Q32M78 642 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 TXNRD3Q86VQ6 643 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 COL23A1Q86Y22 540 aaPredicted RBP12.58□□□□□ -0.4
COL25A1-204ENST00000494183 PPP4R1Q8TF05 950 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 ZMYND15Q9H091 742 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 POLR3FQ9H1D9 316 aaPredicted RBP12.58□□□□□ -0.4
COL25A1-204ENST00000494183 JPH1Q9HDC5 661 aaPredicted RBP12.58□□□□□ -0.4
COL25A1-204ENST00000494183 CNOT8Q9UFF9 292 aaKnown RBP12.58□□□□□ -0.4
COL25A1-204ENST00000494183 RIMBP3CA6NJZ7 1639 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 RIMBP3BA6NNM3 1639 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 RIMBP3Q9UFD9 1639 aa12.58□□□□□ -0.4
COL25A1-204ENST00000494183 PHLPP2Q6ZVD8 1323 aa12.57□□□□□ -0.4
COL25A1-204ENST00000494183 NR3C2P08235 984 aa12.57□□□□□ -0.4
COL25A1-204ENST00000494183 NMT1P30419 496 aaKnown RBP12.57□□□□□ -0.4
COL25A1-204ENST00000494183 IFNAR2P48551 515 aa12.57□□□□□ -0.4
COL25A1-204ENST00000494183 PPP6R3Q5H9R7 873 aaPredicted RBP12.57□□□□□ -0.4
COL25A1-204ENST00000494183 STYK1Q6J9G0 422 aa12.57□□□□□ -0.4
COL25A1-204ENST00000494183 DARS2Q6PI48 645 aaKnown RBP12.57□□□□□ -0.4
COL25A1-204ENST00000494183 RHOT2Q8IXI1 618 aa12.57□□□□□ -0.4
COL25A1-204ENST00000494183 PBKQ96KB5 322 aa12.57□□□□□ -0.4
COL25A1-204ENST00000494183 SCYL1Q96KG9 808 aa12.57□□□□□ -0.4
COL25A1-204ENST00000494183 CEP72Q9P209 647 aa12.57□□□□□ -0.4
COL25A1-204ENST00000494183 ANAPC7Q9UJX3 599 aa12.57□□□□□ -0.4
COL25A1-204ENST00000494183 KIDINS220Q9ULH0 1771 aa12.57□□□□□ -0.4
COL25A1-204ENST00000494183 TTC26A0AVF1 554 aa12.57□□□□□ -0.4
COL25A1-204ENST00000494183 HIP1RO75146 1068 aa12.57□□□□□ -0.4
COL25A1-204ENST00000494183 GABPB1Q06547 395 aaPredicted RBP12.57□□□□□ -0.4
COL25A1-204ENST00000494183 METTL16Q86W50 562 aaKnown RBP12.57□□□□□ -0.4
COL25A1-204ENST00000494183 BCAS4Q8TDM0 211 aa12.57□□□□□ -0.4
COL25A1-204ENST00000494183 MYOZ2Q9NPC6 264 aa12.57□□□□□ -0.4
COL25A1-204ENST00000494183 FNDC3AQ9Y2H6 1198 aaKnown RBP12.57□□□□□ -0.4
COL25A1-204ENST00000494183 EYA4O95677 639 aa12.57□□□□□ -0.4
COL25A1-204ENST00000494183 HSPA6P17066 643 aa12.57□□□□□ -0.4
COL25A1-204ENST00000494183 MRPS25P82663 173 aaKnown RBP12.57□□□□□ -0.4
COL25A1-204ENST00000494183 GPATCH11Q8N954 259 aa12.57□□□□□ -0.4
COL25A1-204ENST00000494183 POLLQ9UGP5 575 aa12.57□□□□□ -0.4
COL25A1-204ENST00000494183 NRXN1Q9ULB1 1477 aa12.57□□□□□ -0.4
COL25A1-204ENST00000494183 C19orf81C9J6K1 198 aa12.57□□□□□ -0.4
COL25A1-204ENST00000494183 SEC31AO94979 1220 aaKnown RBP12.57□□□□□ -0.4
COL25A1-204ENST00000494183 GGPS1O95749 300 aa12.57□□□□□ -0.4
COL25A1-204ENST00000494183 DHX9Q08211 1270 aaKnown RBP12.57□□□□□ -0.4
COL25A1-204ENST00000494183 RNF149Q8NC42 400 aa12.57□□□□□ -0.4
COL25A1-204ENST00000494183 MICAL1Q8TDZ2 1067 aa12.57□□□□□ -0.4
COL25A1-204ENST00000494183 ANAPC5Q9UJX4 755 aa12.57□□□□□ -0.4
COL25A1-204ENST00000494183 ASB14A6NK59 587 aa12.56□□□□□ -0.4
COL25A1-204ENST00000494183 GSTA1P08263 222 aa12.56□□□□□ -0.4
COL25A1-204ENST00000494183 GSTA2P09210 222 aa12.56□□□□□ -0.4
COL25A1-204ENST00000494183 RWDD2BP57060 319 aa12.56□□□□□ -0.4
COL25A1-204ENST00000494183 PRPSAP1Q14558 356 aa12.56□□□□□ -0.4
COL25A1-204ENST00000494183 TAF1CQ15572 869 aaPredicted RBP12.56□□□□□ -0.4
COL25A1-204ENST00000494183 RYBPQ8N488 228 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms