RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 NME8Q8N427 588 aa16.51■□□□□ 0.23
ATG4B-224ENST00000494132 DYDC2Q96IM9 177 aa16.51■□□□□ 0.23
ATG4B-224ENST00000494132 LXNQ9BS40 222 aa16.51■□□□□ 0.23
ATG4B-224ENST00000494132 BMP2KQ9NSY1 1161 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-224ENST00000494132 EYSQ5T1H1 3165 aa16.5■□□□□ 0.23
ATG4B-224ENST00000494132 FNDC1Q4ZHG4 1894 aaPredicted RBP16.5■□□□□ 0.23
ATG4B-224ENST00000494132 KDM3AQ9Y4C1 1321 aa16.5■□□□□ 0.23
ATG4B-224ENST00000494132 CHD9Q3L8U1 2897 aa16.5■□□□□ 0.23
ATG4B-224ENST00000494132 LINC01553A4QN01 128 aa16.5■□□□□ 0.23
ATG4B-224ENST00000494132 MAGEB2O15479 319 aa16.5■□□□□ 0.23
ATG4B-224ENST00000494132 RPLP2P05387 115 aaKnown RBP16.5■□□□□ 0.23
ATG4B-224ENST00000494132 NPEPPSP55786 919 aa16.5■□□□□ 0.23
ATG4B-224ENST00000494132 NLRP11P59045 1033 aaKnown RBP16.5■□□□□ 0.23
ATG4B-224ENST00000494132 TARBP2Q15633 366 aaKnown RBP16.5■□□□□ 0.23
ATG4B-224ENST00000494132 RTN4RL1Q86UN2 441 aaPredicted RBP16.5■□□□□ 0.23
ATG4B-224ENST00000494132 SLFN12Q8IYM2 578 aa16.5■□□□□ 0.23
ATG4B-224ENST00000494132 LINC01465Q8N7H1 131 aa16.5■□□□□ 0.23
ATG4B-224ENST00000494132 ZNF579Q8NAF0 562 aaKnown RBP16.5■□□□□ 0.23
ATG4B-224ENST00000494132 MAP7D2Q96T17 732 aa16.5■□□□□ 0.23
ATG4B-224ENST00000494132 RAD9AQ99638 391 aa16.5■□□□□ 0.23
ATG4B-224ENST00000494132 FOXP1Q9H334 677 aaPredicted RBP16.5■□□□□ 0.23
ATG4B-224ENST00000494132 TTC12Q9H892 705 aaPredicted RBP16.5■□□□□ 0.23
ATG4B-224ENST00000494132 CHD7Q9P2D1 2997 aa16.5■□□□□ 0.23
ATG4B-224ENST00000494132 ATG2AQ2TAZ0 1938 aa16.5■□□□□ 0.23
ATG4B-224ENST00000494132 POTEMA6NI47 508 aa16.49■□□□□ 0.23
ATG4B-224ENST00000494132 ENPP3O14638 875 aa16.49■□□□□ 0.23
ATG4B-224ENST00000494132 ZBTB39O15060 712 aa16.49■□□□□ 0.23
ATG4B-224ENST00000494132 GPR32O75388 356 aa16.49■□□□□ 0.23
ATG4B-224ENST00000494132 RPS6KA5O75582 802 aa16.49■□□□□ 0.23
ATG4B-224ENST00000494132 GJB2P29033 226 aa16.49■□□□□ 0.23
ATG4B-224ENST00000494132 QARSP47897 775 aaKnown RBP16.49■□□□□ 0.23
ATG4B-224ENST00000494132 EPHA7Q15375 998 aa16.49■□□□□ 0.23
ATG4B-224ENST00000494132 CCDC85BQ15834 202 aaPredicted RBP16.49■□□□□ 0.23
ATG4B-224ENST00000494132 MICALL1Q8N3F8 863 aa16.49■□□□□ 0.23
ATG4B-224ENST00000494132 USP38Q8NB14 1042 aa16.49■□□□□ 0.23
ATG4B-224ENST00000494132 TOP1MTQ969P6 601 aa16.49■□□□□ 0.23
ATG4B-224ENST00000494132 CEP89Q96ST8 783 aa16.49■□□□□ 0.23
ATG4B-224ENST00000494132 YME1L1Q96TA2 773 aa16.49■□□□□ 0.23
ATG4B-224ENST00000494132 NIFKQ9BYG3 293 aaKnown RBP16.49■□□□□ 0.23
ATG4B-224ENST00000494132 TMX1Q9H3N1 280 aa16.49■□□□□ 0.23
ATG4B-224ENST00000494132 PCDHA12Q9UN75 941 aa16.49■□□□□ 0.23
ATG4B-224ENST00000494132 COL4A6Q14031 1691 aa16.49■□□□□ 0.23
ATG4B-224ENST00000494132 A0A087WWV3 80 aa16.48■□□□□ 0.23
ATG4B-224ENST00000494132 MGEA5O60502 916 aa16.48■□□□□ 0.23
ATG4B-224ENST00000494132 P4HBP07237 508 aaKnown RBP16.48■□□□□ 0.23
ATG4B-224ENST00000494132 TMOD1P28289 359 aa16.48■□□□□ 0.23
ATG4B-224ENST00000494132 HTRA4P83105 476 aaPredicted RBP16.48■□□□□ 0.23
ATG4B-224ENST00000494132 FAM228AQ86W67 206 aa16.48■□□□□ 0.23
ATG4B-224ENST00000494132 NOSTRINQ8IVI9 506 aa16.48■□□□□ 0.23
ATG4B-224ENST00000494132 TPH2Q8IWU9 490 aa16.48■□□□□ 0.23
ATG4B-224ENST00000494132 SCLT1Q96NL6 688 aa16.48■□□□□ 0.23
ATG4B-224ENST00000494132 MTMR9Q96QG7 549 aa16.48■□□□□ 0.23
ATG4B-224ENST00000494132 EIF2AK1Q9BQI3 630 aaKnown RBP16.48■□□□□ 0.23
ATG4B-224ENST00000494132 C17orf80Q9BSJ5 609 aa16.48■□□□□ 0.23
ATG4B-224ENST00000494132 ERVK-5Q9HDB9 667 aa16.48■□□□□ 0.23
ATG4B-224ENST00000494132 ST3GAL5Q9UNP4 418 aa16.48■□□□□ 0.23
ATG4B-224ENST00000494132 INSL6Q9Y581 213 aa16.48■□□□□ 0.23
ATG4B-224ENST00000494132 SQORQ9Y6N5 450 aa16.48■□□□□ 0.23
ATG4B-224ENST00000494132 CSDE1O75534 798 aaKnown RBP16.47■□□□□ 0.23
ATG4B-224ENST00000494132 FGFR4P22455 802 aa16.47■□□□□ 0.23
ATG4B-224ENST00000494132 CRYBB1P53674 252 aaPredicted RBP16.47■□□□□ 0.23
ATG4B-224ENST00000494132 TTC38Q5R3I4 469 aa16.47■□□□□ 0.23
ATG4B-224ENST00000494132 MCTP1Q6DN14 999 aa16.47■□□□□ 0.23
ATG4B-224ENST00000494132 SLC17A8Q8NDX2 589 aa16.47■□□□□ 0.23
ATG4B-224ENST00000494132 GDPD5Q8WTR4 605 aa16.47■□□□□ 0.23
ATG4B-224ENST00000494132 CYP26B1Q9NR63 512 aa16.47■□□□□ 0.23
ATG4B-224ENST00000494132 MYO7AQ13402 2215 aa16.47■□□□□ 0.23
ATG4B-224ENST00000494132 SLITRK3O94933 977 aa16.46■□□□□ 0.23
ATG4B-224ENST00000494132 YWHABP31946 246 aaKnown RBP16.46■□□□□ 0.23
ATG4B-224ENST00000494132 MCM2P49736 904 aa16.46■□□□□ 0.23
ATG4B-224ENST00000494132 GATMP50440 423 aa16.46■□□□□ 0.23
ATG4B-224ENST00000494132 GPC3P51654 580 aa16.46■□□□□ 0.23
ATG4B-224ENST00000494132 KSR1Q8IVT5 923 aa16.46■□□□□ 0.23
ATG4B-224ENST00000494132 NLRP7Q8WX94 980 aa16.46■□□□□ 0.23
ATG4B-224ENST00000494132 CEP170P1Q96L14 293 aa16.46■□□□□ 0.23
ATG4B-224ENST00000494132 TGS1Q96RS0 853 aaKnown RBP16.46■□□□□ 0.23
ATG4B-224ENST00000494132 ADAMTS10Q9H324 1103 aa16.46■□□□□ 0.23
ATG4B-224ENST00000494132 PRDM6Q9NQX0 595 aa16.46■□□□□ 0.23
ATG4B-224ENST00000494132 SMC3Q9UQE7 1217 aa16.46■□□□□ 0.23
ATG4B-224ENST00000494132 IGKV6-21A0A0C4DH24 114 aa16.45■□□□□ 0.22
ATG4B-224ENST00000494132 DKC1O60832 514 aaKnown RBP eCLIP16.45■□□□□ 0.22
ATG4B-224ENST00000494132 MAFO75444 373 aaPredicted RBP16.45■□□□□ 0.22
ATG4B-224ENST00000494132 OR52Z1P0C646 297 aa16.45■□□□□ 0.22
ATG4B-224ENST00000494132 U2AF2P26368 475 aaKnown RBP eCLIP16.45■□□□□ 0.22
ATG4B-224ENST00000494132 TECP42680 631 aa16.45■□□□□ 0.22
ATG4B-224ENST00000494132 TOB1P50616 345 aaPredicted RBP16.45■□□□□ 0.22
ATG4B-224ENST00000494132 GRB10Q13322 594 aa16.45■□□□□ 0.22
ATG4B-224ENST00000494132 XKR9Q5GH70 373 aa16.45■□□□□ 0.22
ATG4B-224ENST00000494132 RHPN2Q8IUC4 686 aa16.45■□□□□ 0.22
ATG4B-224ENST00000494132 C4orf19Q8IY42 314 aa16.45■□□□□ 0.22
ATG4B-224ENST00000494132 SP7Q8TDD2 431 aaPredicted RBP16.45■□□□□ 0.22
ATG4B-224ENST00000494132 ADAM2Q99965 735 aa16.45■□□□□ 0.22
ATG4B-224ENST00000494132 FTHL17Q9BXU8 183 aa16.45■□□□□ 0.22
ATG4B-224ENST00000494132 TSPYL2Q9H2G4 693 aaPredicted RBP16.45■□□□□ 0.22
ATG4B-224ENST00000494132 ZSWIM4Q9H7M6 989 aa16.45■□□□□ 0.22
ATG4B-224ENST00000494132 SUCLA2Q9P2R7 463 aaPredicted RBP16.45■□□□□ 0.22
ATG4B-224ENST00000494132 NOL7Q9UMY1 257 aaKnown RBP16.45■□□□□ 0.22
ATG4B-224ENST00000494132 KIF3AQ9Y496 699 aa16.45■□□□□ 0.22
ATG4B-224ENST00000494132 PCDHB6Q9Y5E3 794 aa16.45■□□□□ 0.22
ATG4B-224ENST00000494132 A0A087WZ62 844 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms