RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 CENPFP49454 3210 aa12.64□□□□□ -0.39
MCF2L-231ENST00000494043 RSPH10B2B2RC85 870 aa12.64□□□□□ -0.39
MCF2L-231ENST00000494043 ZEB2O60315 1214 aa12.64□□□□□ -0.39
MCF2L-231ENST00000494043 FAM13AO94988 1023 aa12.64□□□□□ -0.39
MCF2L-231ENST00000494043 RSPH10BP0C881 870 aa12.64□□□□□ -0.39
MCF2L-231ENST00000494043 GAP43P17677 238 aa12.64□□□□□ -0.39
MCF2L-231ENST00000494043 LBX1P52954 281 aa12.64□□□□□ -0.39
MCF2L-231ENST00000494043 POLGP54098 1239 aaPredicted RBP12.64□□□□□ -0.39
MCF2L-231ENST00000494043 PURAQ00577 322 aaKnown RBP12.64□□□□□ -0.39
MCF2L-231ENST00000494043 PSMD2Q13200 908 aa12.64□□□□□ -0.39
MCF2L-231ENST00000494043 EMC2Q15006 297 aa12.64□□□□□ -0.39
MCF2L-231ENST00000494043 SLC9C1Q4G0N8 1177 aa12.64□□□□□ -0.39
MCF2L-231ENST00000494043 ZNF484Q5JVG2 852 aa12.64□□□□□ -0.39
MCF2L-231ENST00000494043 GNASQ5JWF2 1037 aa12.64□□□□□ -0.39
MCF2L-231ENST00000494043 C11orf57Q6ZUT1 292 aaPredicted RBP12.64□□□□□ -0.39
MCF2L-231ENST00000494043 SFR1Q86XK3 245 aa12.64□□□□□ -0.39
MCF2L-231ENST00000494043 DAW1Q8N136 415 aa12.64□□□□□ -0.39
MCF2L-231ENST00000494043 MLKLQ8NB16 471 aa12.64□□□□□ -0.39
MCF2L-231ENST00000494043 KLHDC9Q8NEP7 349 aa12.64□□□□□ -0.39
MCF2L-231ENST00000494043 SLC7A3Q8WY07 619 aa12.64□□□□□ -0.39
MCF2L-231ENST00000494043 KATNAL1Q9BW62 490 aa12.64□□□□□ -0.39
MCF2L-231ENST00000494043 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.64□□□□□ -0.39
MCF2L-231ENST00000494043 DNAJC25Q9H1X3 360 aa12.64□□□□□ -0.39
MCF2L-231ENST00000494043 DHX33Q9H6R0 707 aaKnown RBP12.64□□□□□ -0.39
MCF2L-231ENST00000494043 PARVGQ9HBI0 331 aa12.64□□□□□ -0.39
MCF2L-231ENST00000494043 XPNPEP1Q9NQW7 623 aa12.64□□□□□ -0.39
MCF2L-231ENST00000494043 GDAQ9Y2T3 454 aa12.64□□□□□ -0.39
MCF2L-231ENST00000494043 COL1A2P08123 1366 aa12.64□□□□□ -0.39
MCF2L-231ENST00000494043 HAS3O00219 553 aa12.63□□□□□ -0.39
MCF2L-231ENST00000494043 MAFO75444 373 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-231ENST00000494043 CAVIN2O95810 425 aa12.63□□□□□ -0.39
MCF2L-231ENST00000494043 INSRRP14616 1297 aa12.63□□□□□ -0.39
MCF2L-231ENST00000494043 PSEN2P49810 448 aa12.63□□□□□ -0.39
MCF2L-231ENST00000494043 TBC1D8BQ0IIM8 1120 aa12.63□□□□□ -0.39
MCF2L-231ENST00000494043 PPFIA1Q13136 1202 aa12.63□□□□□ -0.39
MCF2L-231ENST00000494043 MFSD10Q14728 455 aa12.63□□□□□ -0.39
MCF2L-231ENST00000494043 KIAA0753Q2KHM9 967 aa12.63□□□□□ -0.39
MCF2L-231ENST00000494043 HERC4Q5GLZ8 1057 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-231ENST00000494043 FAM26FQ5R3K3 315 aa12.63□□□□□ -0.39
MCF2L-231ENST00000494043 FAM102BQ5T8I3 360 aa12.63□□□□□ -0.39
MCF2L-231ENST00000494043 LHX8Q68G74 356 aa12.63□□□□□ -0.39
MCF2L-231ENST00000494043 FBXO46Q6PJ61 603 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-231ENST00000494043 MAEAQ7L5Y9 396 aa12.63□□□□□ -0.39
MCF2L-231ENST00000494043 GAS2L3Q86XJ1 694 aa12.63□□□□□ -0.39
MCF2L-231ENST00000494043 EXOC8Q8IYI6 725 aa12.63□□□□□ -0.39
MCF2L-231ENST00000494043 SMYD4Q8IYR2 804 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-231ENST00000494043 KIAA0895Q8NCT3 520 aa12.63□□□□□ -0.39
MCF2L-231ENST00000494043 KIFAP3Q92845 792 aa12.63□□□□□ -0.39
MCF2L-231ENST00000494043 HPS3Q969F9 1004 aa12.63□□□□□ -0.39
MCF2L-231ENST00000494043 DRC1Q96MC2 740 aa12.63□□□□□ -0.39
MCF2L-231ENST00000494043 JPH2Q9BR39 696 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-231ENST00000494043 MTG1Q9BT17 334 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-231ENST00000494043 ZHX3Q9H4I2 956 aa12.63□□□□□ -0.39
MCF2L-231ENST00000494043 POLD4Q9HCU8 107 aa12.63□□□□□ -0.39
MCF2L-231ENST00000494043 GPRC5CQ9NQ84 441 aa12.63□□□□□ -0.39
MCF2L-231ENST00000494043 OLFML3Q9NRN5 406 aa12.63□□□□□ -0.39
MCF2L-231ENST00000494043 SEL1LQ9UBV2 794 aa12.63□□□□□ -0.39
MCF2L-231ENST00000494043 DACH1Q9UI36 760 aa12.63□□□□□ -0.39
MCF2L-231ENST00000494043 PCDHA2Q9Y5H9 948 aa12.63□□□□□ -0.39
MCF2L-231ENST00000494043 SFI1A8K8P3 1242 aa12.62□□□□□ -0.39
MCF2L-231ENST00000494043 GAS2O43903 313 aaKnown RBP12.62□□□□□ -0.39
MCF2L-231ENST00000494043 C22orf31O95567 290 aa12.62□□□□□ -0.39
MCF2L-231ENST00000494043 PLS3P13797 630 aa12.62□□□□□ -0.39
MCF2L-231ENST00000494043 STK4Q13043 487 aa12.62□□□□□ -0.39
MCF2L-231ENST00000494043 GRIK4Q16099 956 aa12.62□□□□□ -0.39
MCF2L-231ENST00000494043 COBLL1Q53SF7 1204 aa12.62□□□□□ -0.39
MCF2L-231ENST00000494043 CCSAPQ6IQ19 270 aaPredicted RBP12.62□□□□□ -0.39
MCF2L-231ENST00000494043 RNF180Q86T96 592 aa12.62□□□□□ -0.39
MCF2L-231ENST00000494043 MYCT1Q8N699 235 aa12.62□□□□□ -0.39
MCF2L-231ENST00000494043 PCSK9Q8NBP7 692 aaKnown RBP12.62□□□□□ -0.39
MCF2L-231ENST00000494043 TRAPPC12Q8WVT3 735 aa12.62□□□□□ -0.39
MCF2L-231ENST00000494043 NAT10Q9H0A0 1025 aaKnown RBP12.62□□□□□ -0.39
MCF2L-231ENST00000494043 UNC93B1Q9H1C4 597 aa12.62□□□□□ -0.39
MCF2L-231ENST00000494043 POLR3FQ9H1D9 316 aaPredicted RBP12.62□□□□□ -0.39
MCF2L-231ENST00000494043 SLC39A2Q9NP94 309 aa12.62□□□□□ -0.39
MCF2L-231ENST00000494043 LARSQ9P2J5 1176 aaKnown RBP12.62□□□□□ -0.39
MCF2L-231ENST00000494043 FRMPD3Q5JV73 1810 aa12.61□□□□□ -0.39
MCF2L-231ENST00000494043 IGKV6-21A0A0C4DH24 114 aa12.61□□□□□ -0.39
MCF2L-231ENST00000494043 PPP1R3GB7ZBB8 358 aa12.61□□□□□ -0.39
MCF2L-231ENST00000494043 ASGR1P07306 291 aa12.61□□□□□ -0.39
MCF2L-231ENST00000494043 SMIM10L2AP0DMW4 78 aa12.61□□□□□ -0.39
MCF2L-231ENST00000494043 SMIM10L2BP0DMW5 78 aa12.61□□□□□ -0.39
MCF2L-231ENST00000494043 CD44P16070 742 aaKnown RBP12.61□□□□□ -0.39
MCF2L-231ENST00000494043 SOX10P56693 466 aa12.61□□□□□ -0.39
MCF2L-231ENST00000494043 RTP1P59025 263 aa12.61□□□□□ -0.39
MCF2L-231ENST00000494043 IGBP1P78318 339 aa12.61□□□□□ -0.39
MCF2L-231ENST00000494043 LRRC41Q15345 812 aa12.61□□□□□ -0.39
MCF2L-231ENST00000494043 KCNA10Q16322 511 aa12.61□□□□□ -0.39
MCF2L-231ENST00000494043 PKN2Q16513 984 aaKnown RBP12.61□□□□□ -0.39
MCF2L-231ENST00000494043 CT47A1Q5JQC4 288 aaPredicted RBP12.61□□□□□ -0.39
MCF2L-231ENST00000494043 ODR4Q5SWX8 454 aa12.61□□□□□ -0.39
MCF2L-231ENST00000494043 CXCL17Q6UXB2 119 aa12.61□□□□□ -0.39
MCF2L-231ENST00000494043 ADSSL1Q8N142 457 aa12.61□□□□□ -0.39
MCF2L-231ENST00000494043 FAM200AQ8TCP9 573 aa12.61□□□□□ -0.39
MCF2L-231ENST00000494043 FIZ1Q96SL8 496 aa12.61□□□□□ -0.39
MCF2L-231ENST00000494043 FGFBP2Q9BYJ0 223 aa12.61□□□□□ -0.39
MCF2L-231ENST00000494043 PAK6Q9NQU5 681 aaPredicted RBP12.61□□□□□ -0.39
MCF2L-231ENST00000494043 TBC1D7Q9P0N9 293 aa12.61□□□□□ -0.39
MCF2L-231ENST00000494043 NRCAMQ92823 1304 aa12.61□□□□□ -0.39
MCF2L-231ENST00000494043 RRN3P2A6NIE6 340 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms