RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 CDHR5Q9HBB8 845 aa25.38■■□□□ 1.65
SNIP1-203ENST00000493916 WRAP73Q9P2S5 460 aaPredicted RBP25.38■■□□□ 1.65
SNIP1-203ENST00000493916 AKT3Q9Y243 479 aa25.38■■□□□ 1.65
SNIP1-203ENST00000493916 GINS2Q9Y248 185 aa25.38■■□□□ 1.65
SNIP1-203ENST00000493916 PPME1Q9Y570 386 aa25.38■■□□□ 1.65
SNIP1-203ENST00000493916 GTF3C3Q9Y5Q9 886 aa25.38■■□□□ 1.65
SNIP1-203ENST00000493916 ENPP3O14638 875 aa25.37■■□□□ 1.65
SNIP1-203ENST00000493916 MCM7P33993 719 aa25.37■■□□□ 1.65
SNIP1-203ENST00000493916 ODR4Q5SWX8 454 aa25.37■■□□□ 1.65
SNIP1-203ENST00000493916 TMEM40Q8WWA1 233 aa25.37■■□□□ 1.65
SNIP1-203ENST00000493916 OSMRQ99650 979 aa25.37■■□□□ 1.65
SNIP1-203ENST00000493916 TMEM60Q9H2L4 133 aa25.37■■□□□ 1.65
SNIP1-203ENST00000493916 ERVK-5Q9HDB9 667 aa25.37■■□□□ 1.65
SNIP1-203ENST00000493916 EVPLQ92817 2033 aa25.37■■□□□ 1.65
SNIP1-203ENST00000493916 RPS6KA5O75582 802 aa25.36■■□□□ 1.65
SNIP1-203ENST00000493916 ATP2B1P20020 1258 aa25.36■■□□□ 1.65
SNIP1-203ENST00000493916 TXKP42681 527 aa25.36■■□□□ 1.65
SNIP1-203ENST00000493916 NEK9Q8TD19 979 aa25.36■■□□□ 1.65
SNIP1-203ENST00000493916 DYDC2Q96IM9 177 aa25.36■■□□□ 1.65
SNIP1-203ENST00000493916 TSPYL2Q9H2G4 693 aaPredicted RBP25.36■■□□□ 1.65
SNIP1-203ENST00000493916 ADAMTS10Q9H324 1103 aa25.36■■□□□ 1.65
SNIP1-203ENST00000493916 TMX1Q9H3N1 280 aa25.36■■□□□ 1.65
SNIP1-203ENST00000493916 ZSWIM4Q9H7M6 989 aa25.36■■□□□ 1.65
SNIP1-203ENST00000493916 SUGCTQ9HAC7 445 aa25.36■■□□□ 1.65
SNIP1-203ENST00000493916 CYP26B1Q9NR63 512 aa25.36■■□□□ 1.65
SNIP1-203ENST00000493916 RGL1Q9NZL6 768 aa25.36■■□□□ 1.65
SNIP1-203ENST00000493916 NOL7Q9UMY1 257 aaKnown RBP25.36■■□□□ 1.65
SNIP1-203ENST00000493916 NOC2LQ9Y3T9 749 aaKnown RBP25.36■■□□□ 1.65
SNIP1-203ENST00000493916 LINC01553A4QN01 128 aa25.35■■□□□ 1.65
SNIP1-203ENST00000493916 MAFO75444 373 aaPredicted RBP25.35■■□□□ 1.65
SNIP1-203ENST00000493916 GJB2P29033 226 aa25.35■■□□□ 1.65
SNIP1-203ENST00000493916 ADGRE1Q14246 886 aa25.35■■□□□ 1.65
SNIP1-203ENST00000493916 TMEM266Q2M3C6 531 aa25.35■■□□□ 1.65
SNIP1-203ENST00000493916 TTC38Q5R3I4 469 aa25.35■■□□□ 1.65
SNIP1-203ENST00000493916 PLA2G4FQ68DD2 849 aa25.35■■□□□ 1.65
SNIP1-203ENST00000493916 PPP1R16BQ96T49 567 aa25.35■■□□□ 1.65
SNIP1-203ENST00000493916 YME1L1Q96TA2 773 aa25.35■■□□□ 1.65
SNIP1-203ENST00000493916 JPH2Q9BR39 696 aaPredicted RBP25.35■■□□□ 1.65
SNIP1-203ENST00000493916 LOXHD1Q8IVV2 1947 aa25.35■■□□□ 1.65
SNIP1-203ENST00000493916 GPR182O15218 404 aa25.34■■□□□ 1.65
SNIP1-203ENST00000493916 UPP2O95045 317 aa25.34■■□□□ 1.65
SNIP1-203ENST00000493916 GPC3P51654 580 aa25.34■■□□□ 1.65
SNIP1-203ENST00000493916 NLRP11P59045 1033 aaKnown RBP25.34■■□□□ 1.65
SNIP1-203ENST00000493916 RTN4RL1Q86UN2 441 aaPredicted RBP25.34■■□□□ 1.65
SNIP1-203ENST00000493916 ARNTL2Q8WYA1 636 aa25.34■■□□□ 1.65
SNIP1-203ENST00000493916 HSD17B14Q9BPX1 270 aa25.34■■□□□ 1.65
SNIP1-203ENST00000493916 EIF2AK1Q9BQI3 630 aaKnown RBP25.34■■□□□ 1.65
SNIP1-203ENST00000493916 SH2D3AQ9BRG2 576 aa25.34■■□□□ 1.65
SNIP1-203ENST00000493916 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.34■■□□□ 1.65
SNIP1-203ENST00000493916 EPOPA6NHQ4 379 aa25.33■■□□□ 1.65
SNIP1-203ENST00000493916 SLITRK3O94933 977 aa25.33■■□□□ 1.65
SNIP1-203ENST00000493916 LYPLA2O95372 231 aa25.33■■□□□ 1.65
SNIP1-203ENST00000493916 OR52Z1P0C646 297 aa25.33■■□□□ 1.65
SNIP1-203ENST00000493916 YWHABP31946 246 aaKnown RBP25.33■■□□□ 1.65
SNIP1-203ENST00000493916 DNM2P50570 870 aa25.33■■□□□ 1.65
SNIP1-203ENST00000493916 ERVK-21P61565 698 aa25.33■■□□□ 1.65
SNIP1-203ENST00000493916 CDC42EP1Q00587 391 aa25.33■■□□□ 1.65
SNIP1-203ENST00000493916 CYP4A11Q02928 519 aa25.33■■□□□ 1.65
SNIP1-203ENST00000493916 NFX1Q12986 1120 aaKnown RBP25.33■■□□□ 1.65
SNIP1-203ENST00000493916 DRP2Q13474 957 aa25.33■■□□□ 1.65
SNIP1-203ENST00000493916 CTTNQ14247 550 aaKnown RBP25.33■■□□□ 1.65
SNIP1-203ENST00000493916 ZNF174Q15697 407 aa25.33■■□□□ 1.65
SNIP1-203ENST00000493916 SPRED2Q7Z698 418 aa25.33■■□□□ 1.65
SNIP1-203ENST00000493916 FAM228AQ86W67 206 aa25.33■■□□□ 1.65
SNIP1-203ENST00000493916 EXOC8Q8IYI6 725 aa25.33■■□□□ 1.65
SNIP1-203ENST00000493916 CEP170P1Q96L14 293 aa25.33■■□□□ 1.65
SNIP1-203ENST00000493916 TGS1Q96RS0 853 aaKnown RBP25.33■■□□□ 1.65
SNIP1-203ENST00000493916 CERS4Q9HA82 394 aa25.33■■□□□ 1.65
SNIP1-203ENST00000493916 RC3H2Q9HBD1 1191 aaKnown RBP25.33■■□□□ 1.65
SNIP1-203ENST00000493916 ST3GAL5Q9UNP4 418 aa25.33■■□□□ 1.65
SNIP1-203ENST00000493916 RFC5P40937 340 aa25.32■■□□□ 1.64
SNIP1-203ENST00000493916 NPEPPSP55786 919 aa25.32■■□□□ 1.64
SNIP1-203ENST00000493916 OTUD6AQ7L8S5 288 aa25.32■■□□□ 1.64
SNIP1-203ENST00000493916 CRIPAKQ8N1N5 446 aa25.32■■□□□ 1.64
SNIP1-203ENST00000493916 SLC7A3Q8WY07 619 aa25.32■■□□□ 1.64
SNIP1-203ENST00000493916 SMC3Q9UQE7 1217 aa25.32■■□□□ 1.64
SNIP1-203ENST00000493916 COL4A4P53420 1690 aaPredicted RBP25.32■■□□□ 1.64
SNIP1-203ENST00000493916 POU3F3P20264 500 aaPredicted RBP25.31■■□□□ 1.64
SNIP1-203ENST00000493916 EIF4BP23588 611 aaKnown RBP25.31■■□□□ 1.64
SNIP1-203ENST00000493916 NPAS4Q8IUM7 802 aa25.31■■□□□ 1.64
SNIP1-203ENST00000493916 TPH2Q8IWU9 490 aa25.31■■□□□ 1.64
SNIP1-203ENST00000493916 DHX33Q9H6R0 707 aaKnown RBP25.31■■□□□ 1.64
SNIP1-203ENST00000493916 TTC3P53804 2025 aa25.3■■□□□ 1.64
SNIP1-203ENST00000493916 POTEMA6NI47 508 aa25.3■■□□□ 1.64
SNIP1-203ENST00000493916 MGEA5O60502 916 aa25.3■■□□□ 1.64
SNIP1-203ENST00000493916 DARSP14868 501 aaKnown RBP25.3■■□□□ 1.64
SNIP1-203ENST00000493916 IGFBP4P22692 258 aa25.3■■□□□ 1.64
SNIP1-203ENST00000493916 CUL4AQ13619 759 aa25.3■■□□□ 1.64
SNIP1-203ENST00000493916 ZNF579Q8NAF0 562 aaKnown RBP25.3■■□□□ 1.64
SNIP1-203ENST00000493916 C1orf112Q9NSG2 853 aa25.3■■□□□ 1.64
SNIP1-203ENST00000493916 SUCLA2Q9P2R7 463 aaPredicted RBP25.3■■□□□ 1.64
SNIP1-203ENST00000493916 ARID2Q68CP9 1835 aa25.3■■□□□ 1.64
SNIP1-203ENST00000493916 GAS2O43903 313 aaKnown RBP25.29■■□□□ 1.64
SNIP1-203ENST00000493916 SARSP49591 514 aaKnown RBP25.29■■□□□ 1.64
SNIP1-203ENST00000493916 TOB1P50616 345 aaPredicted RBP25.29■■□□□ 1.64
SNIP1-203ENST00000493916 POLGP54098 1239 aaPredicted RBP25.29■■□□□ 1.64
SNIP1-203ENST00000493916 C4orf32Q8N8J7 132 aa25.29■■□□□ 1.64
SNIP1-203ENST00000493916 NLRP7Q8WX94 980 aa25.29■■□□□ 1.64
SNIP1-203ENST00000493916 ZNF689Q96CS4 500 aaPredicted RBP25.29■■□□□ 1.64
SNIP1-203ENST00000493916 SCLT1Q96NL6 688 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms