RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 UBE3AQ05086 875 aa19.71■□□□□ 0.75
COL9A1-210ENST00000493682 MCTP2Q6DN12 878 aa19.71■□□□□ 0.75
COL9A1-210ENST00000493682 TRMT1LQ7Z2T5 733 aaKnown RBP19.71■□□□□ 0.75
COL9A1-210ENST00000493682 FAM228AQ86W67 206 aa19.71■□□□□ 0.75
COL9A1-210ENST00000493682 REXO1Q8N1G1 1221 aaKnown RBP19.71■□□□□ 0.75
COL9A1-210ENST00000493682 METTL13Q8N6R0 699 aa19.71■□□□□ 0.75
COL9A1-210ENST00000493682 MICAL1Q8TDZ2 1067 aa19.71■□□□□ 0.75
COL9A1-210ENST00000493682 C6orf50Q9HD87 102 aa19.71■□□□□ 0.75
COL9A1-210ENST00000493682 TYW1Q9NV66 732 aaKnown RBP19.71■□□□□ 0.75
COL9A1-210ENST00000493682 HCSTQ9UBK5 93 aa19.71■□□□□ 0.75
COL9A1-210ENST00000493682 PER2O15055 1255 aa19.7■□□□□ 0.74
COL9A1-210ENST00000493682 GPR32O75388 356 aa19.7■□□□□ 0.74
COL9A1-210ENST00000493682 FGF18O76093 207 aa19.7■□□□□ 0.74
COL9A1-210ENST00000493682 VTNP04004 478 aa19.7■□□□□ 0.74
COL9A1-210ENST00000493682 PSAPP07602 524 aa19.7■□□□□ 0.74
COL9A1-210ENST00000493682 FGFR1P11362 822 aa19.7■□□□□ 0.74
COL9A1-210ENST00000493682 APOBRQ0VD83 1088 aa19.7■□□□□ 0.74
COL9A1-210ENST00000493682 DSC3Q14574 896 aa19.7■□□□□ 0.74
COL9A1-210ENST00000493682 PKN1Q16512 942 aa19.7■□□□□ 0.74
COL9A1-210ENST00000493682 ALYREFQ86V81 257 aaKnown RBP19.7■□□□□ 0.74
COL9A1-210ENST00000493682 SMAP1Q8IYB5 467 aaPredicted RBP19.7■□□□□ 0.74
COL9A1-210ENST00000493682 COLGALT1Q8NBJ5 622 aa19.7■□□□□ 0.74
COL9A1-210ENST00000493682 ATP6V0A4Q9HBG4 840 aa19.7■□□□□ 0.74
COL9A1-210ENST00000493682 TLR9Q9NR96 1032 aa19.7■□□□□ 0.74
COL9A1-210ENST00000493682 TMEM161AQ9NX61 479 aa19.7■□□□□ 0.74
COL9A1-210ENST00000493682 FNDC1Q4ZHG4 1894 aaPredicted RBP19.7■□□□□ 0.74
COL9A1-210ENST00000493682 LOC730098B7Z3J9 87 aa19.69■□□□□ 0.74
COL9A1-210ENST00000493682 CDC45O75419 566 aa19.69■□□□□ 0.74
COL9A1-210ENST00000493682 ERVFC1P60507 584 aa19.69■□□□□ 0.74
COL9A1-210ENST00000493682 PRR16Q569H4 304 aa19.69■□□□□ 0.74
COL9A1-210ENST00000493682 THNSL1Q8IYQ7 743 aa19.69■□□□□ 0.74
COL9A1-210ENST00000493682 CCDC12Q8WUD4 166 aaPredicted RBP19.69■□□□□ 0.74
COL9A1-210ENST00000493682 EDAQ92838 391 aa19.69■□□□□ 0.74
COL9A1-210ENST00000493682 FBXL18Q96ME1 805 aa19.69■□□□□ 0.74
COL9A1-210ENST00000493682 KCNH6Q9H252 994 aa19.69■□□□□ 0.74
COL9A1-210ENST00000493682 CWH43Q9H720 699 aa19.69■□□□□ 0.74
COL9A1-210ENST00000493682 ELAC1Q9H777 363 aaKnown RBP19.69■□□□□ 0.74
COL9A1-210ENST00000493682 GABBR1Q9UBS5 961 aa19.69■□□□□ 0.74
COL9A1-210ENST00000493682 USP15Q9Y4E8 981 aaPredicted RBP19.69■□□□□ 0.74
COL9A1-210ENST00000493682 PCDHA10Q9Y5I2 948 aa19.69■□□□□ 0.74
COL9A1-210ENST00000493682 EVPLQ92817 2033 aa19.68■□□□□ 0.74
COL9A1-210ENST00000493682 PRPF3O43395 683 aaKnown RBP19.68■□□□□ 0.74
COL9A1-210ENST00000493682 CIITAP33076 1130 aa19.68■□□□□ 0.74
COL9A1-210ENST00000493682 CLCN3P51790 818 aa19.68■□□□□ 0.74
COL9A1-210ENST00000493682 RBM10P98175 930 aaKnown RBP19.68■□□□□ 0.74
COL9A1-210ENST00000493682 Q6ZUG5 572 aa19.68■□□□□ 0.74
COL9A1-210ENST00000493682 VN1R2Q8NFZ6 395 aa19.68■□□□□ 0.74
COL9A1-210ENST00000493682 KCNB2Q92953 911 aa19.68■□□□□ 0.74
COL9A1-210ENST00000493682 BRF1Q92994 677 aa19.68■□□□□ 0.74
COL9A1-210ENST00000493682 MFSD14AQ96MC6 490 aa19.68■□□□□ 0.74
COL9A1-210ENST00000493682 TCEAL9Q9UHQ7 104 aa19.68■□□□□ 0.74
COL9A1-210ENST00000493682 CEP131Q9UPN4 1083 aa19.68■□□□□ 0.74
COL9A1-210ENST00000493682 TRIOO75962 3097 aa19.67■□□□□ 0.74
COL9A1-210ENST00000493682 FSCN2O14926 492 aa19.67■□□□□ 0.74
COL9A1-210ENST00000493682 MAGEB2O15479 319 aa19.67■□□□□ 0.74
COL9A1-210ENST00000493682 LAG3P18627 525 aa19.67■□□□□ 0.74
COL9A1-210ENST00000493682 GNA11P29992 359 aa19.67■□□□□ 0.74
COL9A1-210ENST00000493682 NHLH1Q02575 133 aa19.67■□□□□ 0.74
COL9A1-210ENST00000493682 DUSP6Q16828 381 aa19.67■□□□□ 0.74
COL9A1-210ENST00000493682 PDE12Q6L8Q7 609 aaKnown RBP19.67■□□□□ 0.74
COL9A1-210ENST00000493682 CENPQQ7L2Z9 268 aaPredicted RBP19.67■□□□□ 0.74
COL9A1-210ENST00000493682 RASGRP4Q8TDF6 673 aa19.67■□□□□ 0.74
COL9A1-210ENST00000493682 PHKBQ93100 1093 aa19.67■□□□□ 0.74
COL9A1-210ENST00000493682 LENG9Q96B70 501 aa19.67■□□□□ 0.74
COL9A1-210ENST00000493682 FAM167AQ96KS9 214 aa19.67■□□□□ 0.74
COL9A1-210ENST00000493682 CDCA3Q99618 268 aaPredicted RBP19.67■□□□□ 0.74
COL9A1-210ENST00000493682 ADAMTS10Q9H324 1103 aa19.67■□□□□ 0.74
COL9A1-210ENST00000493682 SAMM50Q9Y512 469 aa19.67■□□□□ 0.74
COL9A1-210ENST00000493682 NID2Q14112 1375 aa19.67■□□□□ 0.74
COL9A1-210ENST00000493682 ATXN8OSP0DMR3 200 aa19.66■□□□□ 0.74
COL9A1-210ENST00000493682 NLRP11P59045 1033 aaKnown RBP19.66■□□□□ 0.74
COL9A1-210ENST00000493682 CBX2Q14781 532 aaPredicted RBP19.66■□□□□ 0.74
COL9A1-210ENST00000493682 EFCAB12Q6NXP0 572 aa19.66■□□□□ 0.74
COL9A1-210ENST00000493682 LRRC55Q6ZSA7 311 aa19.66■□□□□ 0.74
COL9A1-210ENST00000493682 LINC01465Q8N7H1 131 aa19.66■□□□□ 0.74
COL9A1-210ENST00000493682 JAKMIP1Q96N16 626 aaKnown RBP19.66■□□□□ 0.74
COL9A1-210ENST00000493682 PHF7Q9BWX1 381 aaPredicted RBP19.66■□□□□ 0.74
COL9A1-210ENST00000493682 TMEM117Q9H0C3 514 aa19.66■□□□□ 0.74
COL9A1-210ENST00000493682 RNF19AQ9NV58 838 aa19.66■□□□□ 0.74
COL9A1-210ENST00000493682 AKT3Q9Y243 479 aa19.66■□□□□ 0.74
COL9A1-210ENST00000493682 LZTS1Q9Y250 596 aa19.66■□□□□ 0.74
COL9A1-210ENST00000493682 MYH9P35579 1960 aaKnown RBP19.65■□□□□ 0.74
COL9A1-210ENST00000493682 FSD2A1L4K1 749 aa19.65■□□□□ 0.74
COL9A1-210ENST00000493682 WDR64B1ANS9 1081 aa19.65■□□□□ 0.74
COL9A1-210ENST00000493682 ZNF862O60290 1169 aa19.65■□□□□ 0.74
COL9A1-210ENST00000493682 TMOD1P28289 359 aa19.65■□□□□ 0.74
COL9A1-210ENST00000493682 PLCB3Q01970 1234 aa19.65■□□□□ 0.74
COL9A1-210ENST00000493682 BLOC1S2Q6QNY1 142 aa19.65■□□□□ 0.74
COL9A1-210ENST00000493682 LRRC71Q8N4P6 559 aa19.65■□□□□ 0.74
COL9A1-210ENST00000493682 BICD2Q8TD16 824 aa19.65■□□□□ 0.74
COL9A1-210ENST00000493682 MRPS27Q92552 414 aaKnown RBP19.65■□□□□ 0.74
COL9A1-210ENST00000493682 CASD1Q96PB1 797 aa19.65■□□□□ 0.74
COL9A1-210ENST00000493682 MAP7D2Q96T17 732 aa19.65■□□□□ 0.74
COL9A1-210ENST00000493682 HOXA2O43364 376 aa19.64■□□□□ 0.73
COL9A1-210ENST00000493682 EDIL3O43854 480 aa19.64■□□□□ 0.73
COL9A1-210ENST00000493682 OATP04181 439 aa19.64■□□□□ 0.73
COL9A1-210ENST00000493682 EIF4BP23588 611 aaKnown RBP19.64■□□□□ 0.73
COL9A1-210ENST00000493682 AKAP17AQ02040 695 aaKnown RBP19.64■□□□□ 0.73
COL9A1-210ENST00000493682 KCNC3Q14003 757 aa19.64■□□□□ 0.73
COL9A1-210ENST00000493682 NTRK3Q16288 839 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms