RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 RBL2Q08999 1139 aa13.49□□□□□ -0.25
RHBDF1-211ENST00000493647 EMC2Q15006 297 aa13.49□□□□□ -0.25
RHBDF1-211ENST00000493647 RRAGBQ5VZM2 374 aa13.49□□□□□ -0.25
RHBDF1-211ENST00000493647 EFCAB12Q6NXP0 572 aa13.49□□□□□ -0.25
RHBDF1-211ENST00000493647 TRAF7Q6Q0C0 670 aa13.49□□□□□ -0.25
RHBDF1-211ENST00000493647 PADI6Q6TGC4 694 aa13.49□□□□□ -0.25
RHBDF1-211ENST00000493647 KCTD17Q8N5Z5 321 aa13.49□□□□□ -0.25
RHBDF1-211ENST00000493647 SYT2Q8N9I0 419 aaPredicted RBP13.49□□□□□ -0.25
RHBDF1-211ENST00000493647 RASSF8Q8NHQ8 419 aa13.49□□□□□ -0.25
RHBDF1-211ENST00000493647 DNAJB3Q8WWF6 145 aa13.49□□□□□ -0.25
RHBDF1-211ENST00000493647 FAM49AQ9H0Q0 323 aaPredicted RBP13.49□□□□□ -0.25
RHBDF1-211ENST00000493647 TMEM39AQ9NV64 488 aa13.49□□□□□ -0.25
RHBDF1-211ENST00000493647 KCNH3Q9ULD8 1083 aa13.49□□□□□ -0.25
RHBDF1-211ENST00000493647 NOD1Q9Y239 953 aa13.49□□□□□ -0.25
RHBDF1-211ENST00000493647 PPME1Q9Y570 386 aa13.49□□□□□ -0.25
RHBDF1-211ENST00000493647 KIAA0355O15063 1070 aa13.48□□□□□ -0.25
RHBDF1-211ENST00000493647 EVI5O60447 810 aa13.48□□□□□ -0.25
RHBDF1-211ENST00000493647 SSBP05455 408 aaKnown RBP eCLIP13.48□□□□□ -0.25
RHBDF1-211ENST00000493647 NDUFA8P51970 172 aa13.48□□□□□ -0.25
RHBDF1-211ENST00000493647 POLGP54098 1239 aaPredicted RBP13.48□□□□□ -0.25
RHBDF1-211ENST00000493647 ARSHQ5FYA8 562 aa13.48□□□□□ -0.25
RHBDF1-211ENST00000493647 RINT1Q6NUQ1 792 aa13.48□□□□□ -0.25
RHBDF1-211ENST00000493647 TAF2Q6P1X5 1199 aa13.48□□□□□ -0.25
RHBDF1-211ENST00000493647 CCDC73Q6ZRK6 1079 aa13.48□□□□□ -0.25
RHBDF1-211ENST00000493647 C1orf186Q6ZWK4 172 aa13.48□□□□□ -0.25
RHBDF1-211ENST00000493647 METTL13Q8N6R0 699 aa13.48□□□□□ -0.25
RHBDF1-211ENST00000493647 MRPS27Q92552 414 aaKnown RBP13.48□□□□□ -0.25
RHBDF1-211ENST00000493647 LARP4BQ92615 738 aaKnown RBP13.48□□□□□ -0.25
RHBDF1-211ENST00000493647 TMEM143Q96AN5 459 aa13.48□□□□□ -0.25
RHBDF1-211ENST00000493647 DHX58Q96C10 678 aa13.48□□□□□ -0.25
RHBDF1-211ENST00000493647 OSBPL7Q9BZF2 842 aa13.48□□□□□ -0.25
RHBDF1-211ENST00000493647 PPP1R12CQ9BZL4 782 aa13.48□□□□□ -0.25
RHBDF1-211ENST00000493647 SUGCTQ9HAC7 445 aa13.48□□□□□ -0.25
RHBDF1-211ENST00000493647 POLD4Q9HCU8 107 aa13.48□□□□□ -0.25
RHBDF1-211ENST00000493647 GPRC5CQ9NQ84 441 aa13.48□□□□□ -0.25
RHBDF1-211ENST00000493647 PRDM5Q9NQX1 630 aaPredicted RBP13.48□□□□□ -0.25
RHBDF1-211ENST00000493647 FAM13BQ9NYF5 915 aa13.48□□□□□ -0.25
RHBDF1-211ENST00000493647 STK17AQ9UEE5 414 aa13.48□□□□□ -0.25
RHBDF1-211ENST00000493647 TRIP12Q14669 1992 aaPredicted RBP13.47□□□□□ -0.25
RHBDF1-211ENST00000493647 NPHP3-ACAD11A0A0J9YXS1 232 aa13.47□□□□□ -0.25
RHBDF1-211ENST00000493647 POLR2DO15514 142 aaKnown RBP13.47□□□□□ -0.25
RHBDF1-211ENST00000493647 ACTN4O43707 911 aaKnown RBP13.47□□□□□ -0.25
RHBDF1-211ENST00000493647 PRPF40AO75400 957 aaKnown RBP13.47□□□□□ -0.25
RHBDF1-211ENST00000493647 DGAT1O75907 488 aa13.47□□□□□ -0.25
RHBDF1-211ENST00000493647 VTNP04004 478 aa13.47□□□□□ -0.25
RHBDF1-211ENST00000493647 CKBP12277 381 aa13.47□□□□□ -0.25
RHBDF1-211ENST00000493647 CYP11B2P19099 503 aa13.47□□□□□ -0.25
RHBDF1-211ENST00000493647 CYP2C18P33260 490 aa13.47□□□□□ -0.25
RHBDF1-211ENST00000493647 STAT6P42226 847 aa13.47□□□□□ -0.25
RHBDF1-211ENST00000493647 MAPK7Q13164 816 aa13.47□□□□□ -0.25
RHBDF1-211ENST00000493647 DHX8Q14562 1220 aaKnown RBP13.47□□□□□ -0.25
RHBDF1-211ENST00000493647 ZNF618Q5T7W0 954 aa13.47□□□□□ -0.25
RHBDF1-211ENST00000493647 MAEAQ7L5Y9 396 aa13.47□□□□□ -0.25
RHBDF1-211ENST00000493647 RPAINQ86UA6 219 aa13.47□□□□□ -0.25
RHBDF1-211ENST00000493647 GPBP1Q86WP2 473 aa13.47□□□□□ -0.25
RHBDF1-211ENST00000493647 DAW1Q8N136 415 aa13.47□□□□□ -0.25
RHBDF1-211ENST00000493647 ASAP3Q8TDY4 903 aa13.47□□□□□ -0.25
RHBDF1-211ENST00000493647 SLC7A3Q8WY07 619 aa13.47□□□□□ -0.25
RHBDF1-211ENST00000493647 DPF3Q92784 378 aa13.47□□□□□ -0.25
RHBDF1-211ENST00000493647 CCDC43Q96MW1 224 aaKnown RBP13.47□□□□□ -0.25
RHBDF1-211ENST00000493647 MTRQ99707 1265 aa13.47□□□□□ -0.25
RHBDF1-211ENST00000493647 WNT8AQ9H1J5 351 aa13.47□□□□□ -0.25
RHBDF1-211ENST00000493647 HIPK3Q9H422 1215 aa13.47□□□□□ -0.25
RHBDF1-211ENST00000493647 ATP6V0A4Q9HBG4 840 aa13.47□□□□□ -0.25
RHBDF1-211ENST00000493647 SERTAD1Q9UHV2 236 aa13.47□□□□□ -0.25
RHBDF1-211ENST00000493647 ZMYND8Q9ULU4 1186 aaPredicted RBP13.47□□□□□ -0.25
RHBDF1-211ENST00000493647 MYMKA6NI61 221 aa13.46□□□□□ -0.25
RHBDF1-211ENST00000493647 CHRNA1P02708 482 aa13.46□□□□□ -0.25
RHBDF1-211ENST00000493647 CTSHP09668 335 aa13.46□□□□□ -0.25
RHBDF1-211ENST00000493647 SYN1P17600 705 aa13.46□□□□□ -0.25
RHBDF1-211ENST00000493647 LIG1P18858 919 aa13.46□□□□□ -0.25
RHBDF1-211ENST00000493647 ARL2P36404 184 aa13.46□□□□□ -0.25
RHBDF1-211ENST00000493647 THPOP40225 353 aa13.46□□□□□ -0.25
RHBDF1-211ENST00000493647 MGAT3Q09327 533 aa13.46□□□□□ -0.25
RHBDF1-211ENST00000493647 TMEM62Q0P6H9 643 aa13.46□□□□□ -0.25
RHBDF1-211ENST00000493647 MBTPS1Q14703 1052 aa13.46□□□□□ -0.25
RHBDF1-211ENST00000493647 GPNMBQ14956 572 aa13.46□□□□□ -0.25
RHBDF1-211ENST00000493647 CSPP1Q1MSJ5 1256 aa13.46□□□□□ -0.25
RHBDF1-211ENST00000493647 RETREG2Q8NC44 543 aa13.46□□□□□ -0.25
RHBDF1-211ENST00000493647 ENGASEQ8NFI3 743 aa13.46□□□□□ -0.25
RHBDF1-211ENST00000493647 CAGE1Q8TC20 777 aa13.46□□□□□ -0.25
RHBDF1-211ENST00000493647 BSNDQ8WZ55 320 aa13.46□□□□□ -0.25
RHBDF1-211ENST00000493647 ZNF668Q96K58 619 aaPredicted RBP13.46□□□□□ -0.25
RHBDF1-211ENST00000493647 PPP1R16BQ96T49 567 aa13.46□□□□□ -0.25
RHBDF1-211ENST00000493647 POLR3FQ9H1D9 316 aaPredicted RBP13.46□□□□□ -0.25
RHBDF1-211ENST00000493647 ADAMTS10Q9H324 1103 aa13.46□□□□□ -0.25
RHBDF1-211ENST00000493647 CDHR5Q9HBB8 845 aa13.46□□□□□ -0.25
RHBDF1-211ENST00000493647 LMBRD1Q9NUN5 540 aa13.46□□□□□ -0.25
RHBDF1-211ENST00000493647 SUCLA2Q9P2R7 463 aaPredicted RBP13.46□□□□□ -0.25
RHBDF1-211ENST00000493647 ARID2Q68CP9 1835 aa13.46□□□□□ -0.26
RHBDF1-211ENST00000493647 GOLGA6L4A6NEF3 574 aa13.45□□□□□ -0.26
RHBDF1-211ENST00000493647 PITPNM1O00562 1244 aa13.45□□□□□ -0.26
RHBDF1-211ENST00000493647 HIP1RO75146 1068 aa13.45□□□□□ -0.26
RHBDF1-211ENST00000493647 GPR32O75388 356 aa13.45□□□□□ -0.26
RHBDF1-211ENST00000493647 SELPP16109 830 aa13.45□□□□□ -0.26
RHBDF1-211ENST00000493647 GUCY2CP25092 1073 aa13.45□□□□□ -0.26
RHBDF1-211ENST00000493647 SYKP43405 635 aa13.45□□□□□ -0.26
RHBDF1-211ENST00000493647 CCL23P55773 120 aa13.45□□□□□ -0.26
RHBDF1-211ENST00000493647 MRPS6P82932 125 aaKnown RBP13.45□□□□□ -0.26
RHBDF1-211ENST00000493647 CACNB1Q02641 598 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms