RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 A0A1W2PQ27 194 aa7.4□□□□□ -1.23
VPS13B-205ENST00000493587 A0A1W2PQ64 194 aa7.4□□□□□ -1.23
VPS13B-205ENST00000493587 A0A1W2PQD8 194 aa7.4□□□□□ -1.23
VPS13B-205ENST00000493587 C5orf60A6NFR6 353 aa7.4□□□□□ -1.23
VPS13B-205ENST00000493587 PSMD14O00487 310 aa7.4□□□□□ -1.23
VPS13B-205ENST00000493587 WDR46O15213 610 aaKnown RBP7.4□□□□□ -1.23
VPS13B-205ENST00000493587 SH3BP5O60239 455 aa7.4□□□□□ -1.23
VPS13B-205ENST00000493587 RARAP10276 462 aa7.4□□□□□ -1.23
VPS13B-205ENST00000493587 TKTP29401 623 aaKnown RBP7.4□□□□□ -1.23
VPS13B-205ENST00000493587 CDC25AP30304 524 aa7.4□□□□□ -1.23
VPS13B-205ENST00000493587 TCF7P36402 384 aaPredicted RBP7.4□□□□□ -1.23
VPS13B-205ENST00000493587 FXR1P51114 621 aaKnown RBP eCLIP7.4□□□□□ -1.23
VPS13B-205ENST00000493587 SULT2A1Q06520 285 aa7.4□□□□□ -1.23
VPS13B-205ENST00000493587 RIC3Q7Z5B4 369 aa7.4□□□□□ -1.23
VPS13B-205ENST00000493587 DTX3LQ8TDB6 740 aa7.4□□□□□ -1.23
VPS13B-205ENST00000493587 SMC6Q96SB8 1091 aa7.4□□□□□ -1.23
VPS13B-205ENST00000493587 CYP39A1Q9NYL5 469 aa7.4□□□□□ -1.23
VPS13B-205ENST00000493587 SELENONQ9NZV5 590 aa7.4□□□□□ -1.23
VPS13B-205ENST00000493587 SIPA1L1O43166 1804 aa7.4□□□□□ -1.23
VPS13B-205ENST00000493587 PTPDC1A2A3K4 754 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 F8W031 263 aaPredicted RBP7.39□□□□□ -1.23
VPS13B-205ENST00000493587 PHBP35232 272 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 RTP1P59025 263 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 TUBA1BP68363 451 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 KPNB1Q14974 876 aaKnown RBP7.39□□□□□ -1.23
VPS13B-205ENST00000493587 TNIP1Q15025 636 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 ZNF362Q5T0B9 420 aaPredicted RBP7.39□□□□□ -1.23
VPS13B-205ENST00000493587 SNX30Q5VWJ9 437 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 TUBA1AQ71U36 451 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 CABP7Q86V35 215 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 TREML1Q86YW5 311 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 KLHL7Q8IXQ5 586 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 MMGT1Q8N4V1 131 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 RHPN1Q8TCX5 695 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 SCG3Q8WXD2 468 aaKnown RBP7.39□□□□□ -1.23
VPS13B-205ENST00000493587 CCDC51Q96ER9 411 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 METTL22Q9BUU2 404 aaPredicted RBP7.39□□□□□ -1.23
VPS13B-205ENST00000493587 NUP85Q9BW27 656 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 PLA2G12BQ9BX93 195 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 VPS16Q9H269 839 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 CNOT10Q9H9A5 744 aaKnown RBP7.39□□□□□ -1.23
VPS13B-205ENST00000493587 COPRSQ9NQ92 184 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 CNOT8Q9UFF9 292 aaKnown RBP7.39□□□□□ -1.23
VPS13B-205ENST00000493587 PNMA3Q9UL41 463 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 FADS3Q9Y5Q0 445 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 MYPNQ86TC9 1320 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 FAM170AA1A519 330 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 ERVV-2B6SEH9 535 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 E7ENQ6 273 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 RGL2O15211 777 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 TPBGLP0DKB5 382 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 HSPA1AP0DMV8 641 aaKnown RBP7.39□□□□□ -1.23
VPS13B-205ENST00000493587 HSPA1BP0DMV9 641 aaKnown RBP7.39□□□□□ -1.23
VPS13B-205ENST00000493587 IL2RBP14784 551 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 CHN1P15882 459 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 PPP1R2P41236 205 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 ERVK-24P63145 666 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 RALGDSQ12967 914 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 NECTIN1Q15223 517 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 PPP1R2P3Q6NXS1 205 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 ATG9AQ7Z3C6 839 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.39□□□□□ -1.23
VPS13B-205ENST00000493587 STKLD1Q8NE28 680 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 ERLEC1Q96DZ1 483 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 PHF12Q96QT6 1004 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 TUBGCP5Q96RT8 1024 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 DDX25Q9UHL0 483 aaKnown RBP7.39□□□□□ -1.23
VPS13B-205ENST00000493587 DSEQ9UL01 958 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 TIMM22Q9Y584 194 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 COL11A2P13942 1736 aaPredicted RBP7.39□□□□□ -1.23
VPS13B-205ENST00000493587 AFF2P51816 1311 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 RPS6KB1P23443 525 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 CYLC1P35663 651 aaPredicted RBP7.39□□□□□ -1.23
VPS13B-205ENST00000493587 CETN2P41208 172 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 SERPINB8P50452 374 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 CCNG1P51959 295 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 NAA20P61599 178 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 GPSM2P81274 684 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 PTPN12Q05209 780 aaKnown RBP7.39□□□□□ -1.23
VPS13B-205ENST00000493587 WASHC5Q12768 1159 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 SPA17Q15506 151 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 ZNF449Q6P9G9 518 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 OTUD6AQ7L8S5 288 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 SUPT20HQ8NEM7 779 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 TTLL11Q8NHH1 800 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 GABPB2Q8TAK5 448 aaPredicted RBP7.39□□□□□ -1.23
VPS13B-205ENST00000493587 NAT14Q8WUY8 206 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.39□□□□□ -1.23
VPS13B-205ENST00000493587 SKA1Q96BD8 255 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 CHP1Q99653 195 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 IRF2BPLQ9H1B7 796 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 TPK1Q9H3S4 243 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 TCP11L1Q9NUJ3 509 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 SLC12A6Q9UHW9 1150 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 MAP3K2Q9Y2U5 619 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 GPC6Q9Y625 555 aaPredicted RBP7.39□□□□□ -1.23
VPS13B-205ENST00000493587 MYH1P12882 1939 aa7.39□□□□□ -1.23
VPS13B-205ENST00000493587 ZMYM6O95789 1325 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 TXNDC9O14530 226 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 STAMBPO95630 424 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms