RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 EIF2AK1Q9BQI3 630 aaKnown RBP12.98□□□□□ -0.33
CTSA-209ENST00000493522 RAB34Q9BZG1 259 aa12.98□□□□□ -0.33
CTSA-209ENST00000493522 RGL1Q9NZL6 768 aa12.98□□□□□ -0.33
CTSA-209ENST00000493522 RAPGEFL1Q9UHV5 662 aa12.98□□□□□ -0.33
CTSA-209ENST00000493522 PRRC2BQ5JSZ5 2229 aaKnown RBP12.98□□□□□ -0.33
CTSA-209ENST00000493522 MICAL3Q7RTP6 2002 aa12.98□□□□□ -0.33
CTSA-209ENST00000493522 TET1Q8NFU7 2136 aa12.97□□□□□ -0.33
CTSA-209ENST00000493522 VWA3AA6NCI4 1184 aa12.97□□□□□ -0.33
CTSA-209ENST00000493522 RRN3P2A6NIE6 340 aa12.97□□□□□ -0.33
CTSA-209ENST00000493522 TLL1O43897 1013 aa12.97□□□□□ -0.33
CTSA-209ENST00000493522 P4HBP07237 508 aaKnown RBP12.97□□□□□ -0.33
CTSA-209ENST00000493522 TAP1Q03518 808 aa12.97□□□□□ -0.33
CTSA-209ENST00000493522 PTK7Q13308 1070 aa12.97□□□□□ -0.33
CTSA-209ENST00000493522 ZNF484Q5JVG2 852 aa12.97□□□□□ -0.33
CTSA-209ENST00000493522 HAUS3Q68CZ6 603 aa12.97□□□□□ -0.33
CTSA-209ENST00000493522 DTHD1Q6ZMT9 781 aa12.97□□□□□ -0.33
CTSA-209ENST00000493522 ZNF396Q96N95 335 aaPredicted RBP12.97□□□□□ -0.33
CTSA-209ENST00000493522 CTAGE1Q96RT6 745 aa12.97□□□□□ -0.33
CTSA-209ENST00000493522 USP28Q96RU2 1077 aa12.97□□□□□ -0.33
CTSA-209ENST00000493522 CLIC4Q9Y696 253 aa12.97□□□□□ -0.33
CTSA-209ENST00000493522 TMEM150BA6NC51 233 aa12.96□□□□□ -0.33
CTSA-209ENST00000493522 EPOPA6NHQ4 379 aa12.96□□□□□ -0.33
CTSA-209ENST00000493522 DDX11L8A8MPP1 907 aa12.96□□□□□ -0.33
CTSA-209ENST00000493522 PARNO95453 639 aaKnown RBP12.96□□□□□ -0.33
CTSA-209ENST00000493522 PLA2G5P39877 138 aa12.96□□□□□ -0.33
CTSA-209ENST00000493522 STK38Q15208 465 aa12.96□□□□□ -0.33
CTSA-209ENST00000493522 MTERF2Q49AM1 385 aa12.96□□□□□ -0.33
CTSA-209ENST00000493522 XKR3Q5GH77 459 aa12.96□□□□□ -0.33
CTSA-209ENST00000493522 ARL6IP4Q66PJ3 421 aaKnown RBP12.96□□□□□ -0.33
CTSA-209ENST00000493522 PLA2G4FQ68DD2 849 aa12.96□□□□□ -0.33
CTSA-209ENST00000493522 SERINC5Q86VE9 423 aa12.96□□□□□ -0.33
CTSA-209ENST00000493522 TPH2Q8IWU9 490 aa12.96□□□□□ -0.33
CTSA-209ENST00000493522 SNX29Q8TEQ0 813 aa12.96□□□□□ -0.33
CTSA-209ENST00000493522 DHX38Q92620 1227 aaKnown RBP12.96□□□□□ -0.33
CTSA-209ENST00000493522 WNT8BQ93098 351 aa12.96□□□□□ -0.33
CTSA-209ENST00000493522 HLA-CQ95604 372 aa12.96□□□□□ -0.33
CTSA-209ENST00000493522 ZBTB10Q96DT7 871 aa12.96□□□□□ -0.33
CTSA-209ENST00000493522 FAM122AQ96E09 287 aa12.96□□□□□ -0.33
CTSA-209ENST00000493522 CCDC43Q96MW1 224 aaKnown RBP12.96□□□□□ -0.33
CTSA-209ENST00000493522 FAM49AQ9H0Q0 323 aaPredicted RBP12.96□□□□□ -0.33
CTSA-209ENST00000493522 ZSWIM4Q9H7M6 989 aa12.96□□□□□ -0.33
CTSA-209ENST00000493522 NRBP2Q9NSY0 501 aa12.96□□□□□ -0.33
CTSA-209ENST00000493522 WRAP73Q9P2S5 460 aaPredicted RBP12.96□□□□□ -0.33
CTSA-209ENST00000493522 LRWD1Q9UFC0 647 aa12.96□□□□□ -0.33
CTSA-209ENST00000493522 PTPRSQ13332 1948 aa12.96□□□□□ -0.34
CTSA-209ENST00000493522 PP2D1A8MPX8 630 aa12.95□□□□□ -0.34
CTSA-209ENST00000493522 BRD1O95696 1058 aa12.95□□□□□ -0.34
CTSA-209ENST00000493522 CTSHP09668 335 aa12.95□□□□□ -0.34
CTSA-209ENST00000493522 SELPP16109 830 aa12.95□□□□□ -0.34
CTSA-209ENST00000493522 THPOP40225 353 aa12.95□□□□□ -0.34
CTSA-209ENST00000493522 CCT6AP40227 531 aaKnown RBP12.95□□□□□ -0.34
CTSA-209ENST00000493522 WDR5P61964 334 aaKnown RBP12.95□□□□□ -0.34
CTSA-209ENST00000493522 ADAM17P78536 824 aa12.95□□□□□ -0.34
CTSA-209ENST00000493522 IL17AQ16552 155 aa12.95□□□□□ -0.34
CTSA-209ENST00000493522 MARCH8Q5T0T0 291 aa12.95□□□□□ -0.34
CTSA-209ENST00000493522 TAF2Q6P1X5 1199 aa12.95□□□□□ -0.34
CTSA-209ENST00000493522 MTHFD1LQ6UB35 978 aa12.95□□□□□ -0.34
CTSA-209ENST00000493522 RUFY4Q6ZNE9 571 aa12.95□□□□□ -0.34
CTSA-209ENST00000493522 IGSF22Q8N9C0 903 aa12.95□□□□□ -0.34
CTSA-209ENST00000493522 ZBED2Q9BTP6 218 aa12.95□□□□□ -0.34
CTSA-209ENST00000493522 TUFT1Q9NNX1 390 aa12.95□□□□□ -0.34
CTSA-209ENST00000493522 MBLAC1A4D2B0 266 aaPredicted RBP12.94□□□□□ -0.34
CTSA-209ENST00000493522 ZBTB42B2RXF5 422 aa12.94□□□□□ -0.34
CTSA-209ENST00000493522 MED24O75448 989 aa12.94□□□□□ -0.34
CTSA-209ENST00000493522 ARHGEF15O94989 841 aa12.94□□□□□ -0.34
CTSA-209ENST00000493522 C22orf31O95567 290 aa12.94□□□□□ -0.34
CTSA-209ENST00000493522 MARCKSP29966 332 aaPredicted RBP12.94□□□□□ -0.34
CTSA-209ENST00000493522 YWHABP31946 246 aaKnown RBP12.94□□□□□ -0.34
CTSA-209ENST00000493522 TBC1D8BQ0IIM8 1120 aa12.94□□□□□ -0.34
CTSA-209ENST00000493522 GRB10Q13322 594 aa12.94□□□□□ -0.34
CTSA-209ENST00000493522 PTPAQ15257 358 aa12.94□□□□□ -0.34
CTSA-209ENST00000493522 TRIM71Q2Q1W2 868 aaKnown RBP12.94□□□□□ -0.34
CTSA-209ENST00000493522 CNKSR3Q6P9H4 555 aa12.94□□□□□ -0.34
CTSA-209ENST00000493522 POTEGQ6S5H5 508 aa12.94□□□□□ -0.34
CTSA-209ENST00000493522 ANO5Q75V66 913 aa12.94□□□□□ -0.34
CTSA-209ENST00000493522 LRRC8DQ7L1W4 858 aa12.94□□□□□ -0.34
CTSA-209ENST00000493522 C4orf19Q8IY42 314 aa12.94□□□□□ -0.34
CTSA-209ENST00000493522 SH2D3AQ9BRG2 576 aa12.94□□□□□ -0.34
CTSA-209ENST00000493522 POLR3CQ9BUI4 534 aaPredicted RBP12.94□□□□□ -0.34
CTSA-209ENST00000493522 STK24Q9Y6E0 443 aa12.94□□□□□ -0.34
CTSA-209ENST00000493522 TCF20Q9UGU0 1960 aaKnown RBP12.94□□□□□ -0.34
CTSA-209ENST00000493522 KDM3AQ9Y4C1 1321 aa12.93□□□□□ -0.34
CTSA-209ENST00000493522 EFCAB14O75071 495 aa12.93□□□□□ -0.34
CTSA-209ENST00000493522 SLITRK3O94933 977 aa12.93□□□□□ -0.34
CTSA-209ENST00000493522 STBD1O95210 358 aa12.93□□□□□ -0.34
CTSA-209ENST00000493522 CKBP12277 381 aa12.93□□□□□ -0.34
CTSA-209ENST00000493522 NCLP19338 710 aaKnown RBP12.93□□□□□ -0.34
CTSA-209ENST00000493522 KLRC1P26715 233 aa12.93□□□□□ -0.34
CTSA-209ENST00000493522 NASPP49321 788 aaPredicted RBP12.93□□□□□ -0.34
CTSA-209ENST00000493522 RBL2Q08999 1139 aa12.93□□□□□ -0.34
CTSA-209ENST00000493522 PDIA5Q14554 519 aa12.93□□□□□ -0.34
CTSA-209ENST00000493522 ZRSR1Q15695 479 aaKnown RBP12.93□□□□□ -0.34
CTSA-209ENST00000493522 XKR9Q5GH70 373 aa12.93□□□□□ -0.34
CTSA-209ENST00000493522 KRT79Q5XKE5 535 aa12.93□□□□□ -0.34
CTSA-209ENST00000493522 OTUD6AQ7L8S5 288 aa12.93□□□□□ -0.34
CTSA-209ENST00000493522 RSPH3Q86UC2 560 aa12.93□□□□□ -0.34
CTSA-209ENST00000493522 CATSPER3Q86XQ3 398 aa12.93□□□□□ -0.34
CTSA-209ENST00000493522 METTL13Q8N6R0 699 aa12.93□□□□□ -0.34
CTSA-209ENST00000493522 DNAJB3Q8WWF6 145 aa12.93□□□□□ -0.34
CTSA-209ENST00000493522 CEP170P1Q96L14 293 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms