RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 LRRC26Q2I0M4 334 aa17.52■□□□□ 0.4
HPS4-216ENST00000493455 LONRF3Q496Y0 759 aa17.52■□□□□ 0.4
HPS4-216ENST00000493455 MARCH8Q5T0T0 291 aa17.52■□□□□ 0.4
HPS4-216ENST00000493455 FAM102BQ5T8I3 360 aa17.52■□□□□ 0.4
HPS4-216ENST00000493455 EFCAB12Q6NXP0 572 aa17.52■□□□□ 0.4
HPS4-216ENST00000493455 RUFY4Q6ZNE9 571 aa17.52■□□□□ 0.4
HPS4-216ENST00000493455 DYMQ7RTS9 669 aa17.52■□□□□ 0.4
HPS4-216ENST00000493455 RETREG2Q8NC44 543 aa17.52■□□□□ 0.4
HPS4-216ENST00000493455 CNNM3Q8NE01 707 aa17.52■□□□□ 0.4
HPS4-216ENST00000493455 MTRQ99707 1265 aa17.52■□□□□ 0.4
HPS4-216ENST00000493455 ALPK3Q96L96 1907 aa17.52■□□□□ 0.4
HPS4-216ENST00000493455 ACTN4O43707 911 aaKnown RBP17.51■□□□□ 0.39
HPS4-216ENST00000493455 KINO60870 393 aaKnown RBP17.51■□□□□ 0.39
HPS4-216ENST00000493455 CAPN15O75808 1086 aa17.51■□□□□ 0.39
HPS4-216ENST00000493455 RFC5P40937 340 aa17.51■□□□□ 0.39
HPS4-216ENST00000493455 SLC12A3P55017 1021 aa17.51■□□□□ 0.39
HPS4-216ENST00000493455 PTPN11Q06124 597 aaPredicted RBP17.51■□□□□ 0.39
HPS4-216ENST00000493455 RINT1Q6NUQ1 792 aa17.51■□□□□ 0.39
HPS4-216ENST00000493455 SESTD1Q86VW0 696 aa17.51■□□□□ 0.39
HPS4-216ENST00000493455 FMR1NBQ8N0W7 255 aaPredicted RBP17.51■□□□□ 0.39
HPS4-216ENST00000493455 SYT2Q8N9I0 419 aaPredicted RBP17.51■□□□□ 0.39
HPS4-216ENST00000493455 TMEM143Q96AN5 459 aa17.51■□□□□ 0.39
HPS4-216ENST00000493455 ZNF668Q96K58 619 aaPredicted RBP17.51■□□□□ 0.39
HPS4-216ENST00000493455 BLZF1Q9H2G9 400 aa17.51■□□□□ 0.39
HPS4-216ENST00000493455 ZHX3Q9H4I2 956 aa17.51■□□□□ 0.39
HPS4-216ENST00000493455 GPRC5CQ9NQ84 441 aa17.51■□□□□ 0.39
HPS4-216ENST00000493455 DACT1Q9NYF0 836 aa17.51■□□□□ 0.39
HPS4-216ENST00000493455 AKT3Q9Y243 479 aa17.51■□□□□ 0.39
HPS4-216ENST00000493455 MROH7Q68CQ1 1323 aa17.5■□□□□ 0.39
HPS4-216ENST00000493455 FAM237AA0A1B0GTK4 181 aa17.5■□□□□ 0.39
HPS4-216ENST00000493455 DCDC2CA8MYV0 355 aa17.5■□□□□ 0.39
HPS4-216ENST00000493455 MAGEB2O15479 319 aa17.5■□□□□ 0.39
HPS4-216ENST00000493455 MAFO75444 373 aaPredicted RBP17.5■□□□□ 0.39
HPS4-216ENST00000493455 DGAT1O75907 488 aa17.5■□□□□ 0.39
HPS4-216ENST00000493455 CASP1P29466 404 aa17.5■□□□□ 0.39
HPS4-216ENST00000493455 TLE2Q04725 743 aa17.5■□□□□ 0.39
HPS4-216ENST00000493455 TMEM62Q0P6H9 643 aa17.5■□□□□ 0.39
HPS4-216ENST00000493455 KRBA2Q6ZNG9 492 aa17.5■□□□□ 0.39
HPS4-216ENST00000493455 FAM126BQ8IXS8 530 aa17.5■□□□□ 0.39
HPS4-216ENST00000493455 SLC43A3Q8NBI5 491 aa17.5■□□□□ 0.39
HPS4-216ENST00000493455 DNAJB3Q8WWF6 145 aa17.5■□□□□ 0.39
HPS4-216ENST00000493455 CEP89Q96ST8 783 aa17.5■□□□□ 0.39
HPS4-216ENST00000493455 CUEDC2Q9H467 287 aa17.5■□□□□ 0.39
HPS4-216ENST00000493455 PRDM5Q9NQX1 630 aaPredicted RBP17.5■□□□□ 0.39
HPS4-216ENST00000493455 HIP1RO75146 1068 aa17.49■□□□□ 0.39
HPS4-216ENST00000493455 VTNP04004 478 aa17.49■□□□□ 0.39
HPS4-216ENST00000493455 CTSHP09668 335 aa17.49■□□□□ 0.39
HPS4-216ENST00000493455 SLFN14P0C7P3 912 aa17.49■□□□□ 0.39
HPS4-216ENST00000493455 IDEP14735 1019 aa17.49■□□□□ 0.39
HPS4-216ENST00000493455 CYP11B2P19099 503 aa17.49■□□□□ 0.39
HPS4-216ENST00000493455 TMOD1P28289 359 aa17.49■□□□□ 0.39
HPS4-216ENST00000493455 DNM2P50570 870 aa17.49■□□□□ 0.39
HPS4-216ENST00000493455 CDK7P50613 346 aa17.49■□□□□ 0.39
HPS4-216ENST00000493455 DRP2Q13474 957 aa17.49■□□□□ 0.39
HPS4-216ENST00000493455 SNW1Q13573 536 aaKnown RBP17.49■□□□□ 0.39
HPS4-216ENST00000493455 KCTD17Q8N5Z5 321 aa17.49■□□□□ 0.39
HPS4-216ENST00000493455 ENGASEQ8NFI3 743 aa17.49■□□□□ 0.39
HPS4-216ENST00000493455 SCLT1Q96NL6 688 aa17.49■□□□□ 0.39
HPS4-216ENST00000493455 MAP7D2Q96T17 732 aa17.49■□□□□ 0.39
HPS4-216ENST00000493455 JPH2Q9BR39 696 aaPredicted RBP17.49■□□□□ 0.39
HPS4-216ENST00000493455 POLR3FQ9H1D9 316 aaPredicted RBP17.49■□□□□ 0.39
HPS4-216ENST00000493455 DHX33Q9H6R0 707 aaKnown RBP17.49■□□□□ 0.39
HPS4-216ENST00000493455 XPNPEP1Q9NQW7 623 aa17.49■□□□□ 0.39
HPS4-216ENST00000493455 USP25Q9UHP3 1055 aa17.49■□□□□ 0.39
HPS4-216ENST00000493455 GINS2Q9Y248 185 aa17.49■□□□□ 0.39
HPS4-216ENST00000493455 BRCA2P51587 3418 aa17.49■□□□□ 0.39
HPS4-216ENST00000493455 MBLAC1A4D2B0 266 aaPredicted RBP17.48■□□□□ 0.39
HPS4-216ENST00000493455 MYMKA6NI61 221 aa17.48■□□□□ 0.39
HPS4-216ENST00000493455 RSPH10B2B2RC85 870 aa17.48■□□□□ 0.39
HPS4-216ENST00000493455 TBCAO75347 108 aaKnown RBP17.48■□□□□ 0.39
HPS4-216ENST00000493455 PRR29P0C7W0 189 aa17.48■□□□□ 0.39
HPS4-216ENST00000493455 RSPH10BP0C881 870 aa17.48■□□□□ 0.39
HPS4-216ENST00000493455 HOXC8P31273 242 aa17.48■□□□□ 0.39
HPS4-216ENST00000493455 THPOP40225 353 aa17.48■□□□□ 0.39
HPS4-216ENST00000493455 ASIC1P78348 528 aa17.48■□□□□ 0.39
HPS4-216ENST00000493455 ADAM17P78536 824 aa17.48■□□□□ 0.39
HPS4-216ENST00000493455 C1orf186Q6ZWK4 172 aa17.48■□□□□ 0.39
HPS4-216ENST00000493455 UBE2Q1Q7Z7E8 422 aa17.48■□□□□ 0.39
HPS4-216ENST00000493455 MCPH1Q8NEM0 835 aa17.48■□□□□ 0.39
HPS4-216ENST00000493455 GPT2Q8TD30 523 aa17.48■□□□□ 0.39
HPS4-216ENST00000493455 DDX12PQ92771 950 aa17.48■□□□□ 0.39
HPS4-216ENST00000493455 WNT8BQ93098 351 aa17.48■□□□□ 0.39
HPS4-216ENST00000493455 PAGE5Q96GU1 130 aa17.48■□□□□ 0.39
HPS4-216ENST00000493455 REEP2Q9BRK0 252 aa17.48■□□□□ 0.39
HPS4-216ENST00000493455 SEZ6LQ9BYH1 1024 aa17.48■□□□□ 0.39
HPS4-216ENST00000493455 TNMDQ9H2S6 317 aa17.48■□□□□ 0.39
HPS4-216ENST00000493455 MAGEF1Q9HAY2 307 aa17.48■□□□□ 0.39
HPS4-216ENST00000493455 SUCLA2Q9P2R7 463 aaPredicted RBP17.48■□□□□ 0.39
HPS4-216ENST00000493455 PPME1Q9Y570 386 aa17.48■□□□□ 0.39
HPS4-216ENST00000493455 PCDHA2Q9Y5H9 948 aa17.48■□□□□ 0.39
HPS4-216ENST00000493455 SFI1A8K8P3 1242 aa17.47■□□□□ 0.39
HPS4-216ENST00000493455 RBAK-RBAKDNI3L0D1 243 aa17.47■□□□□ 0.39
HPS4-216ENST00000493455 FAM13AO94988 1023 aa17.47■□□□□ 0.39
HPS4-216ENST00000493455 AMPD3Q01432 767 aa17.47■□□□□ 0.39
HPS4-216ENST00000493455 PTK7Q13308 1070 aa17.47■□□□□ 0.39
HPS4-216ENST00000493455 SNX17Q15036 470 aa17.47■□□□□ 0.39
HPS4-216ENST00000493455 CAMK4Q16566 473 aa17.47■□□□□ 0.39
HPS4-216ENST00000493455 ARSHQ5FYA8 562 aa17.47■□□□□ 0.39
HPS4-216ENST00000493455 SERINC5Q86VE9 423 aa17.47■□□□□ 0.39
HPS4-216ENST00000493455 RHPN2Q8IUC4 686 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms