RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 MROH7-TTC4A0A0A0MT08 1334 aa17.48■□□□□ 0.39
BRAT1-206ENST00000493232 CYP27B1O15528 508 aa17.48■□□□□ 0.39
BRAT1-206ENST00000493232 ECE2O60344 883 aa17.48■□□□□ 0.39
BRAT1-206ENST00000493232 INPP1P49441 399 aa17.48■□□□□ 0.39
BRAT1-206ENST00000493232 PAPOLAP51003 745 aaKnown RBP17.48■□□□□ 0.39
BRAT1-206ENST00000493232 NFX1Q12986 1120 aaKnown RBP17.48■□□□□ 0.39
BRAT1-206ENST00000493232 SEMA3FQ13275 785 aa17.48■□□□□ 0.39
BRAT1-206ENST00000493232 ALX1Q15699 326 aa17.48■□□□□ 0.39
BRAT1-206ENST00000493232 DACT3Q96B18 629 aaPredicted RBP17.48■□□□□ 0.39
BRAT1-206ENST00000493232 FGD4Q96M96 766 aa17.48■□□□□ 0.39
BRAT1-206ENST00000493232 MAGED2Q9UNF1 606 aaPredicted RBP17.48■□□□□ 0.39
BRAT1-206ENST00000493232 NEDD4P46934 1319 aa17.48■□□□□ 0.39
BRAT1-206ENST00000493232 SPECC1L-ADORA2AF8WAN1 911 aa17.48■□□□□ 0.39
BRAT1-206ENST00000493232 PLS3P13797 630 aa17.48■□□□□ 0.39
BRAT1-206ENST00000493232 APOBEC3FQ8IUX4 373 aaKnown RBP17.48■□□□□ 0.39
BRAT1-206ENST00000493232 BEST2Q8NFU1 509 aa17.48■□□□□ 0.39
BRAT1-206ENST00000493232 PIGOQ8TEQ8 1089 aa17.48■□□□□ 0.39
BRAT1-206ENST00000493232 HSPH1Q92598 858 aa17.48■□□□□ 0.39
BRAT1-206ENST00000493232 SERPINI1Q99574 410 aa17.48■□□□□ 0.39
BRAT1-206ENST00000493232 COPB2P35606 906 aa17.48■□□□□ 0.39
BRAT1-206ENST00000493232 ZNF699Q32M78 642 aa17.48■□□□□ 0.39
BRAT1-206ENST00000493232 SARM1Q6SZW1 724 aa17.48■□□□□ 0.39
BRAT1-206ENST00000493232 BRINP3Q76B58 766 aa17.48■□□□□ 0.39
BRAT1-206ENST00000493232 PSPC1Q8WXF1 523 aaKnown RBP17.48■□□□□ 0.39
BRAT1-206ENST00000493232 KLHL29Q96CT2 875 aa17.48■□□□□ 0.39
BRAT1-206ENST00000493232 GINM1Q9NU53 330 aa17.48■□□□□ 0.39
BRAT1-206ENST00000493232 CYP2D6P10635 497 aa17.47■□□□□ 0.39
BRAT1-206ENST00000493232 SLCO1A2P46721 670 aa17.47■□□□□ 0.39
BRAT1-206ENST00000493232 ARL4CP56559 192 aa17.47■□□□□ 0.39
BRAT1-206ENST00000493232 PTPN21Q16825 1174 aa17.47■□□□□ 0.39
BRAT1-206ENST00000493232 SNRNP48Q6IEG0 339 aaKnown RBP17.47■□□□□ 0.39
BRAT1-206ENST00000493232 TRIM67Q6ZTA4 783 aa17.47■□□□□ 0.39
BRAT1-206ENST00000493232 FAF2Q96CS3 445 aa17.47■□□□□ 0.39
BRAT1-206ENST00000493232 CNOT8Q9UFF9 292 aaKnown RBP17.47■□□□□ 0.39
BRAT1-206ENST00000493232 A0A087WWV3 80 aa17.47■□□□□ 0.39
BRAT1-206ENST00000493232 HUS1O60921 280 aa17.47■□□□□ 0.39
BRAT1-206ENST00000493232 FGGP02679 453 aa17.47■□□□□ 0.39
BRAT1-206ENST00000493232 TBXAS1P24557 533 aaPredicted RBP17.47■□□□□ 0.39
BRAT1-206ENST00000493232 PRDX5P30044 214 aa17.47■□□□□ 0.39
BRAT1-206ENST00000493232 TSPY1Q01534 308 aa17.47■□□□□ 0.39
BRAT1-206ENST00000493232 SLC12A1Q13621 1099 aa17.47■□□□□ 0.39
BRAT1-206ENST00000493232 TBK1Q9UHD2 729 aa17.47■□□□□ 0.39
BRAT1-206ENST00000493232 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.47■□□□□ 0.39
BRAT1-206ENST00000493232 GDAQ9Y2T3 454 aa17.47■□□□□ 0.39
BRAT1-206ENST00000493232 ZCCHC11Q5TAX3 1644 aaKnown RBP17.47■□□□□ 0.39
BRAT1-206ENST00000493232 LLGL1Q15334 1064 aa17.47■□□□□ 0.39
BRAT1-206ENST00000493232 CDO1Q16878 200 aa17.47■□□□□ 0.39
BRAT1-206ENST00000493232 RWDD4Q6NW29 188 aaKnown RBP17.47■□□□□ 0.39
BRAT1-206ENST00000493232 PRPF38AQ8NAV1 312 aaKnown RBP17.47■□□□□ 0.39
BRAT1-206ENST00000493232 PARD6BQ9BYG5 372 aa17.47■□□□□ 0.39
BRAT1-206ENST00000493232 PACSIN2Q9UNF0 486 aaPredicted RBP17.47■□□□□ 0.39
BRAT1-206ENST00000493232 NOVA2Q9UNW9 492 aaKnown RBP17.47■□□□□ 0.39
BRAT1-206ENST00000493232 ZHX2Q9Y6X8 837 aa17.47■□□□□ 0.39
BRAT1-206ENST00000493232 IGKV5-2P06315 115 aa17.47■□□□□ 0.39
BRAT1-206ENST00000493232 CA4P22748 312 aa17.47■□□□□ 0.39
BRAT1-206ENST00000493232 ART3Q13508 389 aa17.47■□□□□ 0.39
BRAT1-206ENST00000493232 ZNF568Q3ZCX4 644 aa17.47■□□□□ 0.39
BRAT1-206ENST00000493232 FBXO41Q8TF61 875 aa17.47■□□□□ 0.39
BRAT1-206ENST00000493232 MTRQ99707 1265 aa17.47■□□□□ 0.39
BRAT1-206ENST00000493232 AP1M1Q9BXS5 423 aa17.47■□□□□ 0.39
BRAT1-206ENST00000493232 FNDC3AQ9Y2H6 1198 aaKnown RBP17.47■□□□□ 0.39
BRAT1-206ENST00000493232 MAP3K4Q9Y6R4 1608 aa17.47■□□□□ 0.39
BRAT1-206ENST00000493232 USP17L10C9JJH3 530 aa17.46■□□□□ 0.39
BRAT1-206ENST00000493232 MKRN3Q13064 507 aaKnown RBP17.46■□□□□ 0.39
BRAT1-206ENST00000493232 WRNIP1Q96S55 665 aa17.46■□□□□ 0.39
BRAT1-206ENST00000493232 RAVER2Q9HCJ3 691 aaKnown RBP17.46■□□□□ 0.39
BRAT1-206ENST00000493232 RNF146Q9NTX7 359 aa17.46■□□□□ 0.39
BRAT1-206ENST00000493232 ANAPC7Q9UJX3 599 aa17.46■□□□□ 0.39
BRAT1-206ENST00000493232 UBN2Q6ZU65 1347 aa17.46■□□□□ 0.39
BRAT1-206ENST00000493232 SFI1A8K8P3 1242 aa17.46■□□□□ 0.39
BRAT1-206ENST00000493232 P4HBP07237 508 aaKnown RBP17.46■□□□□ 0.39
BRAT1-206ENST00000493232 NR1D1P20393 614 aa17.46■□□□□ 0.39
BRAT1-206ENST00000493232 GPC5P78333 572 aa17.46■□□□□ 0.39
BRAT1-206ENST00000493232 CAV1Q03135 178 aa17.46■□□□□ 0.39
BRAT1-206ENST00000493232 DCP1AQ9NPI6 582 aaPredicted RBP17.46■□□□□ 0.39
BRAT1-206ENST00000493232 FGFR1OP2Q9NVK5 253 aa17.46■□□□□ 0.39
BRAT1-206ENST00000493232 TTLL4Q14679 1199 aa17.46■□□□□ 0.39
BRAT1-206ENST00000493232 ZNF302Q9NR11 478 aa17.46■□□□□ 0.39
BRAT1-206ENST00000493232 OVOS2A0A0G2JMS6 1433 aa17.46■□□□□ 0.39
BRAT1-206ENST00000493232 OVOS2A0A0J9YW53 1432 aa17.46■□□□□ 0.39
BRAT1-206ENST00000493232 OVOS2Q6IE36 1432 aa17.46■□□□□ 0.39
BRAT1-206ENST00000493232 POTEMA6NI47 508 aa17.46■□□□□ 0.39
BRAT1-206ENST00000493232 ZRANB2O95218 330 aaKnown RBP eCLIP17.46■□□□□ 0.391e-5■■■■□ 25.7
BRAT1-206ENST00000493232 RECQLP46063 649 aaPredicted RBP17.46■□□□□ 0.39
BRAT1-206ENST00000493232 GPC3P51654 580 aa17.46■□□□□ 0.39
BRAT1-206ENST00000493232 TOB2Q14106 344 aaPredicted RBP17.46■□□□□ 0.39
BRAT1-206ENST00000493232 RASIP1Q5U651 963 aa17.46■□□□□ 0.39
BRAT1-206ENST00000493232 TDRD3Q9H7E2 651 aaKnown RBP17.46■□□□□ 0.39
BRAT1-206ENST00000493232 ACTR5Q9H9F9 607 aaPredicted RBP17.46■□□□□ 0.39
BRAT1-206ENST00000493232 BANK1Q8NDB2 785 aa17.45■□□□□ 0.38
BRAT1-206ENST00000493232 TSPYL2Q9H2G4 693 aaPredicted RBP17.45■□□□□ 0.38
BRAT1-206ENST00000493232 FIS1Q9Y3D6 152 aa17.45■□□□□ 0.38
BRAT1-206ENST00000493232 CACNB3P54284 484 aa17.45■□□□□ 0.38
BRAT1-206ENST00000493232 SCG3Q8WXD2 468 aaKnown RBP17.45■□□□□ 0.38
BRAT1-206ENST00000493232 SETSIPP0DME0 302 aa17.45■□□□□ 0.38
BRAT1-206ENST00000493232 SLC27A3Q5K4L6 730 aa17.45■□□□□ 0.38
BRAT1-206ENST00000493232 RNF219Q5W0B1 726 aaPredicted RBP17.45■□□□□ 0.38
BRAT1-206ENST00000493232 LRRC31Q6UY01 552 aa17.45■□□□□ 0.38
BRAT1-206ENST00000493232 GIPC2Q8TF65 315 aa17.45■□□□□ 0.38
BRAT1-206ENST00000493232 ANO9A1A5B4 782 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms