RNA–Protein interactions for RNA: ENST00000493185.2

CLTA-208, Transcript of clathrin light chain A, humanhuman

TSL 3

Gene CLTA, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-208ENST00000493185 CLCN3P51790 818 aa23.18■■□□□ 1.3
CLTA-208ENST00000493185 AK2P54819 239 aa23.18■■□□□ 1.3
CLTA-208ENST00000493185 EFCAB12Q6NXP0 572 aa23.18■■□□□ 1.3
CLTA-208ENST00000493185 CRIPAKQ8N1N5 446 aa23.18■■□□□ 1.3
CLTA-208ENST00000493185 ZNF710Q8N1W2 664 aa23.18■■□□□ 1.3
CLTA-208ENST00000493185 MBOAT7Q96N66 472 aa23.18■■□□□ 1.3
CLTA-208ENST00000493185 NECAB3Q96P71 396 aaPredicted RBP23.18■■□□□ 1.3
CLTA-208ENST00000493185 PLVAPQ9BX97 442 aa23.18■■□□□ 1.3
CLTA-208ENST00000493185 LMAN2LQ9H0V9 348 aa23.18■■□□□ 1.3
CLTA-208ENST00000493185 C1orf112Q9NSG2 853 aa23.18■■□□□ 1.3
CLTA-208ENST00000493185 ST3GAL5Q9UNP4 418 aa23.18■■□□□ 1.3
CLTA-208ENST00000493185 GPR32O75388 356 aa23.17■■□□□ 1.3
CLTA-208ENST00000493185 LINC00271P0C7V0 271 aa23.17■■□□□ 1.3
CLTA-208ENST00000493185 IBSPP21815 317 aaPredicted RBP23.17■■□□□ 1.3
CLTA-208ENST00000493185 UGCGQ16739 394 aa23.17■■□□□ 1.3
CLTA-208ENST00000493185 LETM2Q2VYF4 491 aa23.17■■□□□ 1.3
CLTA-208ENST00000493185 ETNPPLQ8TBG4 499 aa23.17■■□□□ 1.3
CLTA-208ENST00000493185 WASF1Q92558 559 aa23.17■■□□□ 1.3
CLTA-208ENST00000493185 ADAM2Q99965 735 aa23.17■■□□□ 1.3
CLTA-208ENST00000493185 NSUN3Q9H649 340 aaKnown RBP23.17■■□□□ 1.3
CLTA-208ENST00000493185 ORC3Q9UBD5 711 aaPredicted RBP23.17■■□□□ 1.3
CLTA-208ENST00000493185 PCDHB7Q9Y5E2 793 aa23.17■■□□□ 1.3
CLTA-208ENST00000493185 TBC1D8BQ0IIM8 1120 aa23.16■■□□□ 1.3
CLTA-208ENST00000493185 PAN2Q504Q3 1202 aaKnown RBP23.16■■□□□ 1.3
CLTA-208ENST00000493185 FAM228AQ86W67 206 aa23.16■■□□□ 1.3
CLTA-208ENST00000493185 LRRC71Q8N4P6 559 aa23.16■■□□□ 1.3
CLTA-208ENST00000493185 MRPL42Q9Y6G3 142 aaKnown RBP23.16■■□□□ 1.3
CLTA-208ENST00000493185 MYO7AQ13402 2215 aa23.16■■□□□ 1.3
CLTA-208ENST00000493185 KIAA1671Q9BY89 1806 aa23.15■■□□□ 1.3
CLTA-208ENST00000493185 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.15■■□□□ 1.3
CLTA-208ENST00000493185 MGEA5O60502 916 aa23.15■■□□□ 1.3
CLTA-208ENST00000493185 GCFC2P16383 781 aaKnown RBP23.15■■□□□ 1.3
CLTA-208ENST00000493185 KCNA5P22460 613 aa23.15■■□□□ 1.3
CLTA-208ENST00000493185 NLRP11P59045 1033 aaKnown RBP23.15■■□□□ 1.3
CLTA-208ENST00000493185 TCEAL5Q5H9L2 206 aa23.15■■□□□ 1.3
CLTA-208ENST00000493185 SLC24A5Q71RS6 500 aa23.15■■□□□ 1.3
CLTA-208ENST00000493185 NEK8Q86SG6 692 aa23.15■■□□□ 1.3
CLTA-208ENST00000493185 LINC01465Q8N7H1 131 aa23.15■■□□□ 1.3
CLTA-208ENST00000493185 RGS18Q9NS28 235 aa23.15■■□□□ 1.3
CLTA-208ENST00000493185 SEPT9Q9UHD8 586 aaPredicted RBP23.15■■□□□ 1.3
CLTA-208ENST00000493185 GRM6O15303 877 aa23.14■■□□□ 1.29
CLTA-208ENST00000493185 SLC37A4O43826 429 aa23.14■■□□□ 1.29
CLTA-208ENST00000493185 CTDNEP1O95476 244 aa23.14■■□□□ 1.29
CLTA-208ENST00000493185 CENPBP07199 599 aaPredicted RBP23.14■■□□□ 1.29
CLTA-208ENST00000493185 XKR3Q5GH77 459 aa23.14■■□□□ 1.29
CLTA-208ENST00000493185 B3GNT9Q6UX72 402 aa23.14■■□□□ 1.29
CLTA-208ENST00000493185 P2RX5Q93086 422 aa23.14■■□□□ 1.29
CLTA-208ENST00000493185 SCLT1Q96NL6 688 aa23.14■■□□□ 1.29
CLTA-208ENST00000493185 NAP1L4Q99733 375 aaKnown RBP23.14■■□□□ 1.29
CLTA-208ENST00000493185 ATG2AQ2TAZ0 1938 aa23.14■■□□□ 1.29
CLTA-208ENST00000493185 LEXMQ3ZCV2 418 aa23.13■■□□□ 1.29
CLTA-208ENST00000493185 MTERF2Q49AM1 385 aa23.13■■□□□ 1.29
CLTA-208ENST00000493185 NAALADL2Q58DX5 795 aa23.13■■□□□ 1.29
CLTA-208ENST00000493185 PPP4R3AQ6IN85 833 aa23.13■■□□□ 1.29
CLTA-208ENST00000493185 PIK3AP1Q6ZUJ8 805 aa23.13■■□□□ 1.29
CLTA-208ENST00000493185 NECAB1Q8N987 351 aa23.13■■□□□ 1.29
CLTA-208ENST00000493185 FAM20AQ96MK3 541 aa23.13■■□□□ 1.29
CLTA-208ENST00000493185 NIFKQ9BYG3 293 aaKnown RBP23.13■■□□□ 1.29
CLTA-208ENST00000493185 ADAMTS10Q9H324 1103 aa23.13■■□□□ 1.29
CLTA-208ENST00000493185 GJB4Q9NTQ9 266 aa23.13■■□□□ 1.29
CLTA-208ENST00000493185 FNDC1Q4ZHG4 1894 aaPredicted RBP23.13■■□□□ 1.29
CLTA-208ENST00000493185 C9IYK1 514 aa23.12■■□□□ 1.29
CLTA-208ENST00000493185 DTNBO60941 627 aa23.12■■□□□ 1.29
CLTA-208ENST00000493185 EIF4BP23588 611 aaKnown RBP23.12■■□□□ 1.29
CLTA-208ENST00000493185 GATMP50440 423 aa23.12■■□□□ 1.29
CLTA-208ENST00000493185 TARBP2Q15633 366 aaKnown RBP23.12■■□□□ 1.29
CLTA-208ENST00000493185 ME3Q16798 604 aa23.12■■□□□ 1.29
CLTA-208ENST00000493185 GTF3C6Q969F1 213 aa23.12■■□□□ 1.29
CLTA-208ENST00000493185 BRMS1Q9HCU9 246 aa23.12■■□□□ 1.29
CLTA-208ENST00000493185 PLAGL2Q9UPG8 496 aa23.12■■□□□ 1.29
CLTA-208ENST00000493185 BDP1A6H8Y1 2624 aa23.11■■□□□ 1.29
CLTA-208ENST00000493185 NCK2O43639 380 aa23.11■■□□□ 1.29
CLTA-208ENST00000493185 MARCH6O60337 910 aa23.11■■□□□ 1.29
CLTA-208ENST00000493185 CCNT1O60563 726 aaKnown RBP23.11■■□□□ 1.29
CLTA-208ENST00000493185 MMP1P03956 469 aa23.11■■□□□ 1.29
CLTA-208ENST00000493185 GPC3P51654 580 aa23.11■■□□□ 1.29
CLTA-208ENST00000493185 NEK4P51957 841 aa23.11■■□□□ 1.29
CLTA-208ENST00000493185 PSMC5P62195 406 aa23.11■■□□□ 1.29
CLTA-208ENST00000493185 PPP2R5CQ13362 524 aa23.11■■□□□ 1.29
CLTA-208ENST00000493185 EP400NLQ6ZTU2 488 aa23.11■■□□□ 1.29
CLTA-208ENST00000493185 OXER1Q8TDS5 423 aa23.11■■□□□ 1.29
CLTA-208ENST00000493185 PABPC5Q96DU9 382 aaKnown RBP23.11■■□□□ 1.29
CLTA-208ENST00000493185 ATP6V0A4Q9HBG4 840 aa23.11■■□□□ 1.29
CLTA-208ENST00000493185 KCNMB3Q9NPA1 279 aa23.11■■□□□ 1.29
CLTA-208ENST00000493185 TBKBP1A7MCY6 615 aa23.1■■□□□ 1.29
CLTA-208ENST00000493185 DDX11L8A8MPP1 907 aa23.1■■□□□ 1.29
CLTA-208ENST00000493185 DKC1O60832 514 aaKnown RBP eCLIP23.1■■□□□ 1.29
CLTA-208ENST00000493185 ZSCAN20P17040 1043 aaPredicted RBP23.1■■□□□ 1.29
CLTA-208ENST00000493185 KRT2P35908 639 aa23.1■■□□□ 1.29
CLTA-208ENST00000493185 DNM2P50570 870 aa23.1■■□□□ 1.29
CLTA-208ENST00000493185 CDC42EP1Q00587 391 aa23.1■■□□□ 1.29
CLTA-208ENST00000493185 DSC3Q14574 896 aa23.1■■□□□ 1.29
CLTA-208ENST00000493185 SPOUT1Q5T280 376 aaKnown RBP23.1■■□□□ 1.29
CLTA-208ENST00000493185 NLRP7Q8WX94 980 aa23.1■■□□□ 1.29
CLTA-208ENST00000493185 ZNF668Q96K58 619 aaPredicted RBP23.1■■□□□ 1.29
CLTA-208ENST00000493185 ELAC1Q9H777 363 aaKnown RBP23.1■■□□□ 1.29
CLTA-208ENST00000493185 ALG13Q9NP73 1137 aaKnown RBP23.1■■□□□ 1.29
CLTA-208ENST00000493185 TMEM161AQ9NX61 479 aa23.1■■□□□ 1.29
CLTA-208ENST00000493185 TMEM150BA6NC51 233 aa23.09■■□□□ 1.29
CLTA-208ENST00000493185 TBX3O15119 743 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms