RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 CDHR5Q9HBB8 845 aa14.05□□□□□ -0.16
COL6A1-205ENST00000492851 ATP6V0A4Q9HBG4 840 aa14.05□□□□□ -0.16
COL6A1-205ENST00000492851 TMEM161AQ9NX61 479 aa14.05□□□□□ -0.16
COL6A1-205ENST00000492851 CLDND1Q9NY35 253 aa14.05□□□□□ -0.16
COL6A1-205ENST00000492851 AKT3Q9Y243 479 aa14.05□□□□□ -0.16
COL6A1-205ENST00000492851 MRPL42Q9Y6G3 142 aaKnown RBP14.05□□□□□ -0.16
COL6A1-205ENST00000492851 BDP1A6H8Y1 2624 aa14.04□□□□□ -0.16
COL6A1-205ENST00000492851 ADAMTS3O15072 1205 aa14.04□□□□□ -0.16
COL6A1-205ENST00000492851 DKC1O60832 514 aaKnown RBP eCLIP14.04□□□□□ -0.16
COL6A1-205ENST00000492851 PPFIA3O75145 1194 aa14.04□□□□□ -0.16
COL6A1-205ENST00000492851 ALADP13716 330 aa14.04□□□□□ -0.16
COL6A1-205ENST00000492851 EIF4BP23588 611 aaKnown RBP14.04□□□□□ -0.16
COL6A1-205ENST00000492851 DNM2P50570 870 aa14.04□□□□□ -0.16
COL6A1-205ENST00000492851 NLRP11P59045 1033 aaKnown RBP14.04□□□□□ -0.16
COL6A1-205ENST00000492851 ANAPC15P60006 121 aa14.04□□□□□ -0.16
COL6A1-205ENST00000492851 TBC1D8BQ0IIM8 1120 aa14.04□□□□□ -0.16
COL6A1-205ENST00000492851 NONOQ15233 471 aaKnown RBP eCLIP14.04□□□□□ -0.16
COL6A1-205ENST00000492851 CTC1Q2NKJ3 1217 aa14.04□□□□□ -0.16
COL6A1-205ENST00000492851 SPOUT1Q5T280 376 aaKnown RBP14.04□□□□□ -0.16
COL6A1-205ENST00000492851 PDE12Q6L8Q7 609 aaKnown RBP14.04□□□□□ -0.16
COL6A1-205ENST00000492851 TRMT1LQ7Z2T5 733 aaKnown RBP14.04□□□□□ -0.16
COL6A1-205ENST00000492851 MIER3Q7Z3K6 550 aa14.04□□□□□ -0.16
COL6A1-205ENST00000492851 SPPL3Q8TCT6 385 aa14.04□□□□□ -0.16
COL6A1-205ENST00000492851 WASF1Q92558 559 aa14.04□□□□□ -0.16
COL6A1-205ENST00000492851 UIMC1Q96RL1 719 aa14.04□□□□□ -0.16
COL6A1-205ENST00000492851 OSMRQ99650 979 aa14.04□□□□□ -0.16
COL6A1-205ENST00000492851 JPH2Q9BR39 696 aaPredicted RBP14.04□□□□□ -0.16
COL6A1-205ENST00000492851 NIFKQ9BYG3 293 aaKnown RBP14.04□□□□□ -0.16
COL6A1-205ENST00000492851 UPF3BQ9BZI7 483 aaKnown RBP14.04□□□□□ -0.16
COL6A1-205ENST00000492851 ALG13Q9NP73 1137 aaKnown RBP14.04□□□□□ -0.16
COL6A1-205ENST00000492851 MUC3AQ02505 3323 aa14.03□□□□□ -0.16
COL6A1-205ENST00000492851 C9IYK1 514 aa14.03□□□□□ -0.16
COL6A1-205ENST00000492851 PI4K2BG5E9Z4 385 aa14.03□□□□□ -0.16
COL6A1-205ENST00000492851 H3BQ06 376 aaPredicted RBP14.03□□□□□ -0.16
COL6A1-205ENST00000492851 M0R2N6 131 aa14.03□□□□□ -0.16
COL6A1-205ENST00000492851 PSMD10O75832 226 aa14.03□□□□□ -0.16
COL6A1-205ENST00000492851 VTNP04004 478 aa14.03□□□□□ -0.16
COL6A1-205ENST00000492851 PRKCEQ02156 737 aa14.03□□□□□ -0.16
COL6A1-205ENST00000492851 PAN2Q504Q3 1202 aaKnown RBP14.03□□□□□ -0.16
COL6A1-205ENST00000492851 XKR3Q5GH77 459 aa14.03□□□□□ -0.16
COL6A1-205ENST00000492851 EXOC8Q8IYI6 725 aa14.03□□□□□ -0.16
COL6A1-205ENST00000492851 KLHL23Q8NBE8 558 aa14.03□□□□□ -0.16
COL6A1-205ENST00000492851 TMEM40Q8WWA1 233 aa14.03□□□□□ -0.16
COL6A1-205ENST00000492851 RSPH1Q8WYR4 309 aa14.03□□□□□ -0.16
COL6A1-205ENST00000492851 MBOAT7Q96N66 472 aa14.03□□□□□ -0.16
COL6A1-205ENST00000492851 INO80BQ9C086 356 aaPredicted RBP14.03□□□□□ -0.16
COL6A1-205ENST00000492851 SLKQ9H2G2 1235 aaPredicted RBP14.03□□□□□ -0.16
COL6A1-205ENST00000492851 REV3LO60673 3130 aa14.03□□□□□ -0.16
COL6A1-205ENST00000492851 RALGAPA2Q2PPJ7 1873 aa14.02□□□□□ -0.16
COL6A1-205ENST00000492851 CCDC194A0A1B0GVG4 234 aa14.02□□□□□ -0.17
COL6A1-205ENST00000492851 CHMP2AO43633 222 aa14.02□□□□□ -0.17
COL6A1-205ENST00000492851 EDIL3O43854 480 aa14.02□□□□□ -0.17
COL6A1-205ENST00000492851 ZNF862O60290 1169 aa14.02□□□□□ -0.17
COL6A1-205ENST00000492851 GPR37L1O60883 481 aa14.02□□□□□ -0.17
COL6A1-205ENST00000492851 GCFC2P16383 781 aaKnown RBP14.02□□□□□ -0.17
COL6A1-205ENST00000492851 SSTR3P32745 418 aaPredicted RBP14.02□□□□□ -0.17
COL6A1-205ENST00000492851 HYAL1Q12794 435 aa14.02□□□□□ -0.17
COL6A1-205ENST00000492851 STK3Q13188 491 aa14.02□□□□□ -0.17
COL6A1-205ENST00000492851 TMEM31Q5JXX7 168 aa14.02□□□□□ -0.17
COL6A1-205ENST00000492851 PPP4R3AQ6IN85 833 aa14.02□□□□□ -0.17
COL6A1-205ENST00000492851 FAM228AQ86W67 206 aa14.02□□□□□ -0.17
COL6A1-205ENST00000492851 LINC01465Q8N7H1 131 aa14.02□□□□□ -0.17
COL6A1-205ENST00000492851 POF1BQ8WVV4 589 aa14.02□□□□□ -0.17
COL6A1-205ENST00000492851 FAM20AQ96MK3 541 aa14.02□□□□□ -0.17
COL6A1-205ENST00000492851 POP1Q99575 1024 aaKnown RBP14.02□□□□□ -0.17
COL6A1-205ENST00000492851 ADAMTS10Q9H324 1103 aa14.02□□□□□ -0.17
COL6A1-205ENST00000492851 UNC45AQ9H3U1 944 aa14.02□□□□□ -0.17
COL6A1-205ENST00000492851 CHST12Q9NRB3 414 aa14.02□□□□□ -0.17
COL6A1-205ENST00000492851 DACT1Q9NYF0 836 aa14.02□□□□□ -0.17
COL6A1-205ENST00000492851 DDX25Q9UHL0 483 aaKnown RBP14.02□□□□□ -0.17
COL6A1-205ENST00000492851 PUF60Q9UHX1 559 aaKnown RBP14.02□□□□□ -0.17
COL6A1-205ENST00000492851 TTC3P53804 2025 aa14.02□□□□□ -0.17
COL6A1-205ENST00000492851 STK36Q9NRP7 1315 aa14.01□□□□□ -0.17
COL6A1-205ENST00000492851 CARNS1A5YM72 827 aa14.01□□□□□ -0.17
COL6A1-205ENST00000492851 TBKBP1A7MCY6 615 aa14.01□□□□□ -0.17
COL6A1-205ENST00000492851 RBAK-RBAKDNI3L0D1 243 aa14.01□□□□□ -0.17
COL6A1-205ENST00000492851 MGEA5O60502 916 aa14.01□□□□□ -0.17
COL6A1-205ENST00000492851 EOMESO95936 686 aa14.01□□□□□ -0.17
COL6A1-205ENST00000492851 ITGB1P05556 798 aa14.01□□□□□ -0.17
COL6A1-205ENST00000492851 IL9P15248 144 aa14.01□□□□□ -0.17
COL6A1-205ENST00000492851 LAG3P18627 525 aa14.01□□□□□ -0.17
COL6A1-205ENST00000492851 GPC3P51654 580 aa14.01□□□□□ -0.17
COL6A1-205ENST00000492851 CLCN3P51790 818 aa14.01□□□□□ -0.17
COL6A1-205ENST00000492851 PSMC5P62195 406 aa14.01□□□□□ -0.17
COL6A1-205ENST00000492851 ADAM15Q13444 863 aa14.01□□□□□ -0.17
COL6A1-205ENST00000492851 DSC3Q14574 896 aa14.01□□□□□ -0.17
COL6A1-205ENST00000492851 TARBP2Q15633 366 aaKnown RBP14.01□□□□□ -0.17
COL6A1-205ENST00000492851 FAM102BQ5T8I3 360 aa14.01□□□□□ -0.17
COL6A1-205ENST00000492851 B3GNT9Q6UX72 402 aa14.01□□□□□ -0.17
COL6A1-205ENST00000492851 ABI1Q8IZP0 508 aa14.01□□□□□ -0.17
COL6A1-205ENST00000492851 MICAL1Q8TDZ2 1067 aa14.01□□□□□ -0.17
COL6A1-205ENST00000492851 SCLT1Q96NL6 688 aa14.01□□□□□ -0.17
COL6A1-205ENST00000492851 CDCA3Q99618 268 aaPredicted RBP14.01□□□□□ -0.17
COL6A1-205ENST00000492851 PHF20Q9BVI0 1012 aa14.01□□□□□ -0.17
COL6A1-205ENST00000492851 GCOM2Q9BZD3 368 aaPredicted RBP14.01□□□□□ -0.17
COL6A1-205ENST00000492851 TMEM117Q9H0C3 514 aa14.01□□□□□ -0.17
COL6A1-205ENST00000492851 IGFLR1Q9H665 355 aa14.01□□□□□ -0.17
COL6A1-205ENST00000492851 EPHX3Q9H6B9 360 aa14.01□□□□□ -0.17
COL6A1-205ENST00000492851 PPP4R2Q9NY27 417 aa14.01□□□□□ -0.17
COL6A1-205ENST00000492851 LZTS1Q9Y250 596 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms