RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 ADAM2Q99965 735 aa14.95□□□□□ -0.02
HDAC3-213ENST00000492506 AZI2Q9H6S1 392 aa14.95□□□□□ -0.02
HDAC3-213ENST00000492506 AAASQ9NRG9 546 aa14.95□□□□□ -0.02
HDAC3-213ENST00000492506 SEC63Q9UGP8 760 aaKnown RBP14.95□□□□□ -0.02
HDAC3-213ENST00000492506 CDH22Q9UJ99 828 aa14.95□□□□□ -0.02
HDAC3-213ENST00000492506 PCDHA6Q9UN73 950 aa14.95□□□□□ -0.02
HDAC3-213ENST00000492506 LZTS1Q9Y250 596 aa14.95□□□□□ -0.02
HDAC3-213ENST00000492506 PCDHA8Q9Y5H6 950 aa14.95□□□□□ -0.02
HDAC3-213ENST00000492506 NFASCO94856 1347 aa14.94□□□□□ -0.02
HDAC3-213ENST00000492506 GVINP1Q7Z2Y8 2422 aa14.94□□□□□ -0.02
HDAC3-213ENST00000492506 IGKV6D-21A0A0A0MT36 114 aa14.94□□□□□ -0.02
HDAC3-213ENST00000492506 HIDE1A8MVS5 230 aa14.94□□□□□ -0.02
HDAC3-213ENST00000492506 GALR2O43603 387 aaPredicted RBP14.94□□□□□ -0.02
HDAC3-213ENST00000492506 ATG7O95352 703 aa14.94□□□□□ -0.02
HDAC3-213ENST00000492506 GSPT1P15170 499 aaKnown RBP14.94□□□□□ -0.02
HDAC3-213ENST00000492506 IBSPP21815 317 aaPredicted RBP14.94□□□□□ -0.02
HDAC3-213ENST00000492506 KLRC1P26715 233 aa14.94□□□□□ -0.02
HDAC3-213ENST00000492506 KIF5BP33176 963 aa14.94□□□□□ -0.02
HDAC3-213ENST00000492506 STAT5BP51692 787 aa14.94□□□□□ -0.02
HDAC3-213ENST00000492506 ITGB3BPQ13352 177 aaPredicted RBP14.94□□□□□ -0.02
HDAC3-213ENST00000492506 SPOUT1Q5T280 376 aaKnown RBP14.94□□□□□ -0.02
HDAC3-213ENST00000492506 LRRC55Q6ZSA7 311 aa14.94□□□□□ -0.02
HDAC3-213ENST00000492506 SLC24A5Q71RS6 500 aa14.94□□□□□ -0.02
HDAC3-213ENST00000492506 THNSL1Q8IYQ7 743 aa14.94□□□□□ -0.02
HDAC3-213ENST00000492506 KIAA0319LQ8IZA0 1049 aa14.94□□□□□ -0.02
HDAC3-213ENST00000492506 TNPO1Q92973 898 aaKnown RBP14.94□□□□□ -0.02
HDAC3-213ENST00000492506 MXRA8Q9BRK3 442 aa14.94□□□□□ -0.02
HDAC3-213ENST00000492506 LZTS2Q9BRK4 669 aa14.94□□□□□ -0.02
HDAC3-213ENST00000492506 PANK2Q9BZ23 570 aa14.94□□□□□ -0.02
HDAC3-213ENST00000492506 C1orf112Q9NSG2 853 aa14.94□□□□□ -0.02
HDAC3-213ENST00000492506 ST3GAL5Q9UNP4 418 aa14.94□□□□□ -0.02
HDAC3-213ENST00000492506 DENND4AQ7Z401 1863 aa14.94□□□□□ -0.02
HDAC3-213ENST00000492506 CACNA1AO00555 2505 aa14.93□□□□□ -0.02
HDAC3-213ENST00000492506 SPDYE3A6NKU9 549 aa14.93□□□□□ -0.02
HDAC3-213ENST00000492506 ZBTB42B2RXF5 422 aa14.93□□□□□ -0.02
HDAC3-213ENST00000492506 ZNF500O60304 480 aaPredicted RBP14.93□□□□□ -0.02
HDAC3-213ENST00000492506 RPS6KA5O75582 802 aa14.93□□□□□ -0.02
HDAC3-213ENST00000492506 ARP10275 920 aa14.93□□□□□ -0.02
HDAC3-213ENST00000492506 FGFR1P11362 822 aa14.93□□□□□ -0.02
HDAC3-213ENST00000492506 SP100P23497 879 aaPredicted RBP14.93□□□□□ -0.02
HDAC3-213ENST00000492506 COL9A3Q14050 684 aaPredicted RBP14.93□□□□□ -0.02
HDAC3-213ENST00000492506 PLPP4Q5VZY2 271 aa14.93□□□□□ -0.02
HDAC3-213ENST00000492506 TMEM105Q8N8V8 129 aa14.93□□□□□ -0.02
HDAC3-213ENST00000492506 KREMEN2Q8NCW0 462 aa14.93□□□□□ -0.02
HDAC3-213ENST00000492506 MRPS27Q92552 414 aaKnown RBP14.93□□□□□ -0.02
HDAC3-213ENST00000492506 APOL5Q9BWW9 433 aa14.93□□□□□ -0.02
HDAC3-213ENST00000492506 RNF19AQ9NV58 838 aa14.93□□□□□ -0.02
HDAC3-213ENST00000492506 GINS2Q9Y248 185 aa14.93□□□□□ -0.02
HDAC3-213ENST00000492506 DMXL1Q9Y485 3027 aa14.92□□□□□ -0.02
HDAC3-213ENST00000492506 DNAH14Q0VDD8 3507 aa14.92□□□□□ -0.02
HDAC3-213ENST00000492506 hCG_1642624A0A1W2PR95 340 aa14.92□□□□□ -0.02
HDAC3-213ENST00000492506 DENND3A2RUS2 1198 aa14.92□□□□□ -0.02
HDAC3-213ENST00000492506 BRD1O95696 1058 aa14.92□□□□□ -0.02
HDAC3-213ENST00000492506 SRGAP2BP0DMP2 458 aa14.92□□□□□ -0.02
HDAC3-213ENST00000492506 HOXB8P17481 243 aaPredicted RBP14.92□□□□□ -0.02
HDAC3-213ENST00000492506 LAG3P18627 525 aa14.92□□□□□ -0.02
HDAC3-213ENST00000492506 NBL1P41271 181 aa14.92□□□□□ -0.02
HDAC3-213ENST00000492506 SLC26A2P50443 739 aa14.92□□□□□ -0.02
HDAC3-213ENST00000492506 FOXK2Q01167 660 aa14.92□□□□□ -0.02
HDAC3-213ENST00000492506 DSC3Q14574 896 aa14.92□□□□□ -0.02
HDAC3-213ENST00000492506 LLGL2Q6P1M3 1020 aa14.92□□□□□ -0.02
HDAC3-213ENST00000492506 TCF25Q9BQ70 676 aa14.92□□□□□ -0.02
HDAC3-213ENST00000492506 SMOC2Q9H3U7 446 aa14.92□□□□□ -0.02
HDAC3-213ENST00000492506 ELAC1Q9H777 363 aaKnown RBP14.92□□□□□ -0.02
HDAC3-213ENST00000492506 AGO4Q9HCK5 861 aaKnown RBP14.92□□□□□ -0.02
HDAC3-213ENST00000492506 TMEM161AQ9NX61 479 aa14.92□□□□□ -0.02
HDAC3-213ENST00000492506 PRR23AA6NEV1 266 aa14.91□□□□□ -0.02
HDAC3-213ENST00000492506 CCNE2O96020 404 aa14.91□□□□□ -0.02
HDAC3-213ENST00000492506 RXRAP19793 462 aa14.91□□□□□ -0.02
HDAC3-213ENST00000492506 ATP4AP20648 1035 aa14.91□□□□□ -0.02
HDAC3-213ENST00000492506 CHMLP26374 656 aa14.91□□□□□ -0.02
HDAC3-213ENST00000492506 GNAQP50148 359 aa14.91□□□□□ -0.02
HDAC3-213ENST00000492506 ABHD15Q6UXT9 468 aa14.91□□□□□ -0.02
HDAC3-213ENST00000492506 FAM228AQ86W67 206 aa14.91□□□□□ -0.02
HDAC3-213ENST00000492506 UBALD2Q8IYN6 164 aa14.91□□□□□ -0.02
HDAC3-213ENST00000492506 CASD1Q96PB1 797 aa14.91□□□□□ -0.02
HDAC3-213ENST00000492506 SDF4Q9BRK5 362 aa14.91□□□□□ -0.02
HDAC3-213ENST00000492506 MTA3Q9BTC8 594 aa14.91□□□□□ -0.02
HDAC3-213ENST00000492506 CCDC94Q9BW85 323 aaPredicted RBP14.91□□□□□ -0.02
HDAC3-213ENST00000492506 SLKQ9H2G2 1235 aaPredicted RBP14.91□□□□□ -0.02
HDAC3-213ENST00000492506 POMKQ9H5K3 350 aa14.91□□□□□ -0.02
HDAC3-213ENST00000492506 ATP6V0A4Q9HBG4 840 aa14.91□□□□□ -0.02
HDAC3-213ENST00000492506 NGRNQ9NPE2 291 aaKnown RBP14.91□□□□□ -0.02
HDAC3-213ENST00000492506 RNF216Q9NWF9 866 aaPredicted RBP14.91□□□□□ -0.02
HDAC3-213ENST00000492506 SORCS3Q9UPU3 1222 aa14.91□□□□□ -0.02
HDAC3-213ENST00000492506 FRYLO94915 3013 aa14.9□□□□□ -0.02
HDAC3-213ENST00000492506 COL1A2P08123 1366 aa14.9□□□□□ -0.02
HDAC3-213ENST00000492506 C2CD4DB7Z1M9 353 aa14.9□□□□□ -0.02
HDAC3-213ENST00000492506 SH2B2O14492 632 aaPredicted RBP14.9□□□□□ -0.02
HDAC3-213ENST00000492506 GPR182O15218 404 aa14.9□□□□□ -0.02
HDAC3-213ENST00000492506 HBP1O60381 514 aa14.9□□□□□ -0.02
HDAC3-213ENST00000492506 MTMR3Q13615 1198 aa14.9□□□□□ -0.02
HDAC3-213ENST00000492506 TTC22Q5TAA0 569 aa14.9□□□□□ -0.02
HDAC3-213ENST00000492506 TYW1BQ6NUM6 668 aa14.9□□□□□ -0.02
HDAC3-213ENST00000492506 KCNT2Q6UVM3 1135 aa14.9□□□□□ -0.02
HDAC3-213ENST00000492506 ZBTB33Q86T24 672 aa14.9□□□□□ -0.02
HDAC3-213ENST00000492506 CCDC60Q8IWA6 550 aaPredicted RBP14.9□□□□□ -0.02
HDAC3-213ENST00000492506 MAP4K1Q92918 833 aa14.9□□□□□ -0.02
HDAC3-213ENST00000492506 TMEM117Q9H0C3 514 aa14.9□□□□□ -0.02
HDAC3-213ENST00000492506 ENTPD7Q9NQZ7 604 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms