RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 SMIM35A0A1B0GVV1 85 aa16.53■□□□□ 0.24
SS18L1-205ENST00000492466 ZBTB42B2RXF5 422 aa16.53■□□□□ 0.24
SS18L1-205ENST00000492466 PI4K2BG5E9Z4 385 aa16.53■□□□□ 0.24
SS18L1-205ENST00000492466 H3BQ06 376 aaPredicted RBP16.53■□□□□ 0.24
SS18L1-205ENST00000492466 M0R2N6 131 aa16.53■□□□□ 0.24
SS18L1-205ENST00000492466 RPLP2P05387 115 aaKnown RBP16.53■□□□□ 0.24
SS18L1-205ENST00000492466 ATP4AP20648 1035 aa16.53■□□□□ 0.24
SS18L1-205ENST00000492466 CTNNB1P35222 781 aa16.53■□□□□ 0.24
SS18L1-205ENST00000492466 CTC1Q2NKJ3 1217 aa16.53■□□□□ 0.24
SS18L1-205ENST00000492466 PTCRAQ6ISU1 281 aaPredicted RBP16.53■□□□□ 0.24
SS18L1-205ENST00000492466 MOXD1Q6UVY6 613 aa16.53■□□□□ 0.24
SS18L1-205ENST00000492466 TNPO1Q92973 898 aaKnown RBP16.53■□□□□ 0.24
SS18L1-205ENST00000492466 CELF4Q9BZC1 486 aaKnown RBP16.53■□□□□ 0.24
SS18L1-205ENST00000492466 SMC3Q9UQE7 1217 aa16.53■□□□□ 0.24
SS18L1-205ENST00000492466 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.53■□□□□ 0.24
SS18L1-205ENST00000492466 WDR64B1ANS9 1081 aa16.52■□□□□ 0.24
SS18L1-205ENST00000492466 BTBD18B2RXH4 712 aa16.52■□□□□ 0.24
SS18L1-205ENST00000492466 H3BQV1 296 aa16.52■□□□□ 0.24
SS18L1-205ENST00000492466 MSH4O15457 936 aa16.52■□□□□ 0.24
SS18L1-205ENST00000492466 EDIL3O43854 480 aa16.52■□□□□ 0.24
SS18L1-205ENST00000492466 PSAPP07602 524 aa16.52■□□□□ 0.24
SS18L1-205ENST00000492466 KLRC1P26715 233 aa16.52■□□□□ 0.24
SS18L1-205ENST00000492466 SLC26A2P50443 739 aa16.52■□□□□ 0.24
SS18L1-205ENST00000492466 BTG3Q14201 252 aaPredicted RBP16.52■□□□□ 0.24
SS18L1-205ENST00000492466 ZNF746Q6NUN9 644 aaPredicted RBP16.52■□□□□ 0.24
SS18L1-205ENST00000492466 PDXDC2PQ6P474 469 aa16.52■□□□□ 0.24
SS18L1-205ENST00000492466 CCDC60Q8IWA6 550 aaPredicted RBP16.52■□□□□ 0.24
SS18L1-205ENST00000492466 SMAP1Q8IYB5 467 aaPredicted RBP16.52■□□□□ 0.24
SS18L1-205ENST00000492466 KIAA0319LQ8IZA0 1049 aa16.52■□□□□ 0.24
SS18L1-205ENST00000492466 FTHL17Q9BXU8 183 aa16.52■□□□□ 0.24
SS18L1-205ENST00000492466 CDHR5Q9HBB8 845 aa16.52■□□□□ 0.24
SS18L1-205ENST00000492466 ZNF302Q9NR11 478 aa16.52■□□□□ 0.24
SS18L1-205ENST00000492466 FAM205CA6NFA0 338 aa16.51■□□□□ 0.23
SS18L1-205ENST00000492466 BAG4O95429 457 aaKnown RBP16.51■□□□□ 0.23
SS18L1-205ENST00000492466 ATP2B1P20020 1258 aa16.51■□□□□ 0.23
SS18L1-205ENST00000492466 DNAJB1P25685 340 aa16.51■□□□□ 0.23
SS18L1-205ENST00000492466 HYAL1Q12794 435 aa16.51■□□□□ 0.23
SS18L1-205ENST00000492466 Q4G0T1 1027 aa16.51■□□□□ 0.23
SS18L1-205ENST00000492466 MCTP1Q6DN14 999 aa16.51■□□□□ 0.23
SS18L1-205ENST00000492466 GJD3Q8N144 294 aa16.51■□□□□ 0.23
SS18L1-205ENST00000492466 NME8Q8N427 588 aa16.51■□□□□ 0.23
SS18L1-205ENST00000492466 ATP8B4Q8TF62 1192 aa16.51■□□□□ 0.23
SS18L1-205ENST00000492466 TMEM40Q8WWA1 233 aa16.51■□□□□ 0.23
SS18L1-205ENST00000492466 LENG9Q96B70 501 aa16.51■□□□□ 0.23
SS18L1-205ENST00000492466 RIT2Q99578 217 aa16.51■□□□□ 0.23
SS18L1-205ENST00000492466 C11orf84Q9BUA3 381 aaPredicted RBP16.51■□□□□ 0.23
SS18L1-205ENST00000492466 LMAN2LQ9H0V9 348 aa16.51■□□□□ 0.23
SS18L1-205ENST00000492466 RWDD3Q9Y3V2 267 aa16.51■□□□□ 0.23
SS18L1-205ENST00000492466 MRPL42Q9Y6G3 142 aaKnown RBP16.51■□□□□ 0.23
SS18L1-205ENST00000492466 SLC37A4O43826 429 aa16.5■□□□□ 0.23
SS18L1-205ENST00000492466 HBP1O60381 514 aa16.5■□□□□ 0.23
SS18L1-205ENST00000492466 MGEA5O60502 916 aa16.5■□□□□ 0.23
SS18L1-205ENST00000492466 GPR37L1O60883 481 aa16.5■□□□□ 0.23
SS18L1-205ENST00000492466 GJB2P29033 226 aa16.5■□□□□ 0.23
SS18L1-205ENST00000492466 JAK3P52333 1124 aa16.5■□□□□ 0.23
SS18L1-205ENST00000492466 DLX2Q07687 328 aaPredicted RBP16.5■□□□□ 0.23
SS18L1-205ENST00000492466 TMEM266Q2M3C6 531 aa16.5■□□□□ 0.23
SS18L1-205ENST00000492466 TRMT1LQ7Z2T5 733 aaKnown RBP16.5■□□□□ 0.23
SS18L1-205ENST00000492466 MIER3Q7Z3K6 550 aa16.5■□□□□ 0.23
SS18L1-205ENST00000492466 NPAS4Q8IUM7 802 aa16.5■□□□□ 0.23
SS18L1-205ENST00000492466 CMTR2Q8IYT2 770 aaKnown RBP16.5■□□□□ 0.23
SS18L1-205ENST00000492466 SLC5A5Q92911 643 aa16.5■□□□□ 0.23
SS18L1-205ENST00000492466 PLVAPQ9BX97 442 aa16.5■□□□□ 0.23
SS18L1-205ENST00000492466 ALG13Q9NP73 1137 aaKnown RBP16.5■□□□□ 0.23
SS18L1-205ENST00000492466 NOL7Q9UMY1 257 aaKnown RBP16.5■□□□□ 0.23
SS18L1-205ENST00000492466 PLAGL2Q9UPG8 496 aa16.5■□□□□ 0.23
SS18L1-205ENST00000492466 MAFBQ9Y5Q3 323 aaPredicted RBP16.5■□□□□ 0.23
SS18L1-205ENST00000492466 KIAA1671Q9BY89 1806 aa16.49■□□□□ 0.23
SS18L1-205ENST00000492466 CYP3A7-CYP3A51PA0A087WV96 503 aa16.49■□□□□ 0.23
SS18L1-205ENST00000492466 NEMFO60524 1076 aa16.49■□□□□ 0.23
SS18L1-205ENST00000492466 CYP3A7P24462 503 aa16.49■□□□□ 0.23
SS18L1-205ENST00000492466 SFNP31947 248 aa16.49■□□□□ 0.23
SS18L1-205ENST00000492466 GTF2F1P35269 517 aaKnown RBP eCLIP16.49■□□□□ 0.23
SS18L1-205ENST00000492466 GATMP50440 423 aa16.49■□□□□ 0.23
SS18L1-205ENST00000492466 PAK2Q13177 524 aa16.49■□□□□ 0.23
SS18L1-205ENST00000492466 PUS10Q3MIT2 529 aaKnown RBP16.49■□□□□ 0.23
SS18L1-205ENST00000492466 TMEM31Q5JXX7 168 aa16.49■□□□□ 0.23
SS18L1-205ENST00000492466 PPP4R3AQ6IN85 833 aa16.49■□□□□ 0.23
SS18L1-205ENST00000492466 SWSAP1Q6NVH7 229 aa16.49■□□□□ 0.23
SS18L1-205ENST00000492466 POTEDQ86YR6 584 aa16.49■□□□□ 0.23
SS18L1-205ENST00000492466 FBXO18Q8NFZ0 1043 aa16.49■□□□□ 0.23
SS18L1-205ENST00000492466 SPPL3Q8TCT6 385 aa16.49■□□□□ 0.23
SS18L1-205ENST00000492466 EVPLQ92817 2033 aa16.49■□□□□ 0.23
SS18L1-205ENST00000492466 P2RX5Q93086 422 aa16.49■□□□□ 0.23
SS18L1-205ENST00000492466 GJA10Q969M2 543 aa16.49■□□□□ 0.23
SS18L1-205ENST00000492466 ERVK-5Q9HDB9 667 aa16.49■□□□□ 0.23
SS18L1-205ENST00000492466 DISC1Q9NRI5 854 aa16.49■□□□□ 0.23
SS18L1-205ENST00000492466 CLDND1Q9NY35 253 aa16.49■□□□□ 0.23
SS18L1-205ENST00000492466 GABBR1Q9UBS5 961 aa16.49■□□□□ 0.23
SS18L1-205ENST00000492466 NOC2LQ9Y3T9 749 aaKnown RBP16.49■□□□□ 0.23
SS18L1-205ENST00000492466 PCDHA10Q9Y5I2 948 aa16.49■□□□□ 0.23
SS18L1-205ENST00000492466 FAM86C2PA6NEL3 165 aa16.48■□□□□ 0.23
SS18L1-205ENST00000492466 M0QZ92 97 aa16.48■□□□□ 0.23
SS18L1-205ENST00000492466 C22orf31O95567 290 aa16.48■□□□□ 0.23
SS18L1-205ENST00000492466 ITGB1P05556 798 aa16.48■□□□□ 0.23
SS18L1-205ENST00000492466 ZP2Q05996 745 aa16.48■□□□□ 0.23
SS18L1-205ENST00000492466 CALCRLQ16602 461 aa16.48■□□□□ 0.23
SS18L1-205ENST00000492466 EARS2Q5JPH6 523 aaKnown RBP16.48■□□□□ 0.23
SS18L1-205ENST00000492466 ZNF484Q5JVG2 852 aa16.48■□□□□ 0.23
SS18L1-205ENST00000492466 HSCBQ8IWL3 235 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms