RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 AGXT2Q9BYV1 514 aa10.35□□□□□ -0.75
HDAC3-212ENST00000492407 C22orf23Q9BZE7 217 aa10.35□□□□□ -0.75
HDAC3-212ENST00000492407 SH3GLB2Q9NR46 395 aa10.35□□□□□ -0.75
HDAC3-212ENST00000492407 TMEM260Q9NX78 707 aa10.35□□□□□ -0.75
HDAC3-212ENST00000492407 ST3GAL5Q9UNP4 418 aa10.35□□□□□ -0.75
HDAC3-212ENST00000492407 NOC2LQ9Y3T9 749 aaKnown RBP10.35□□□□□ -0.75
HDAC3-212ENST00000492407 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.35□□□□□ -0.75
HDAC3-212ENST00000492407 ATP4AP20648 1035 aa10.34□□□□□ -0.75
HDAC3-212ENST00000492407 DNAJB1P25685 340 aa10.34□□□□□ -0.75
HDAC3-212ENST00000492407 PSMA5P28066 241 aa10.34□□□□□ -0.75
HDAC3-212ENST00000492407 SFNP31947 248 aa10.34□□□□□ -0.75
HDAC3-212ENST00000492407 HSPA4P34932 840 aa10.34□□□□□ -0.75
HDAC3-212ENST00000492407 PLCB3Q01970 1234 aa10.34□□□□□ -0.75
HDAC3-212ENST00000492407 AKAP17AQ02040 695 aaKnown RBP10.34□□□□□ -0.75
HDAC3-212ENST00000492407 TMEM62Q0P6H9 643 aa10.34□□□□□ -0.75
HDAC3-212ENST00000492407 JAKMIP3Q5VZ66 844 aa10.34□□□□□ -0.75
HDAC3-212ENST00000492407 TMEM184AQ6ZMB5 413 aa10.34□□□□□ -0.75
HDAC3-212ENST00000492407 BMP8AQ7Z5Y6 402 aa10.34□□□□□ -0.75
HDAC3-212ENST00000492407 IPO4Q8TEX9 1081 aaKnown RBP10.34□□□□□ -0.75
HDAC3-212ENST00000492407 PGBD1Q96JS3 809 aa10.34□□□□□ -0.75
HDAC3-212ENST00000492407 MFSD14AQ96MC6 490 aa10.34□□□□□ -0.75
HDAC3-212ENST00000492407 ADAM2Q99965 735 aa10.34□□□□□ -0.75
HDAC3-212ENST00000492407 RNF26Q9BY78 433 aaPredicted RBP10.34□□□□□ -0.75
HDAC3-212ENST00000492407 IGFLR1Q9H665 355 aa10.34□□□□□ -0.75
HDAC3-212ENST00000492407 ATP6V0A4Q9HBG4 840 aa10.34□□□□□ -0.75
HDAC3-212ENST00000492407 NRBP2Q9NSY0 501 aa10.34□□□□□ -0.75
HDAC3-212ENST00000492407 PUF60Q9UHX1 559 aaKnown RBP10.34□□□□□ -0.75
HDAC3-212ENST00000492407 KAT6AQ92794 2004 aa10.33□□□□□ -0.76
HDAC3-212ENST00000492407 BRWD1Q9NSI6 2320 aa10.33□□□□□ -0.76
HDAC3-212ENST00000492407 FAM86C2PA6NEL3 165 aa10.33□□□□□ -0.76
HDAC3-212ENST00000492407 WDR64B1ANS9 1081 aa10.33□□□□□ -0.76
HDAC3-212ENST00000492407 TBX10O75333 385 aa10.33□□□□□ -0.76
HDAC3-212ENST00000492407 GPR32O75388 356 aa10.33□□□□□ -0.76
HDAC3-212ENST00000492407 SRGAP2BP0DMP2 458 aa10.33□□□□□ -0.76
HDAC3-212ENST00000492407 IFNAR1P17181 557 aa10.33□□□□□ -0.76
HDAC3-212ENST00000492407 ATF7P17544 494 aaPredicted RBP10.33□□□□□ -0.76
HDAC3-212ENST00000492407 LAG3P18627 525 aa10.33□□□□□ -0.76
HDAC3-212ENST00000492407 IRS1P35568 1242 aa10.33□□□□□ -0.76
HDAC3-212ENST00000492407 NDUFV1P49821 464 aa10.33□□□□□ -0.76
HDAC3-212ENST00000492407 DLX2Q07687 328 aaPredicted RBP10.33□□□□□ -0.76
HDAC3-212ENST00000492407 DSC3Q14574 896 aa10.33□□□□□ -0.76
HDAC3-212ENST00000492407 CBX2Q14781 532 aaPredicted RBP10.33□□□□□ -0.76
HDAC3-212ENST00000492407 BLOC1S2Q6QNY1 142 aa10.33□□□□□ -0.76
HDAC3-212ENST00000492407 Q6ZUG5 572 aa10.33□□□□□ -0.76
HDAC3-212ENST00000492407 CKAP2LQ8IYA6 745 aa10.33□□□□□ -0.76
HDAC3-212ENST00000492407 LINC01465Q8N7H1 131 aa10.33□□□□□ -0.76
HDAC3-212ENST00000492407 SMRP1Q8NCR6 262 aa10.33□□□□□ -0.76
HDAC3-212ENST00000492407 RDM1Q8NG50 284 aa10.33□□□□□ -0.76
HDAC3-212ENST00000492407 RASGRP4Q8TDF6 673 aa10.33□□□□□ -0.76
HDAC3-212ENST00000492407 EDAQ92838 391 aa10.33□□□□□ -0.76
HDAC3-212ENST00000492407 BRF1Q92994 677 aa10.33□□□□□ -0.76
HDAC3-212ENST00000492407 TCEANC2Q96MN5 208 aa10.33□□□□□ -0.76
HDAC3-212ENST00000492407 MAP7D2Q96T17 732 aa10.33□□□□□ -0.76
HDAC3-212ENST00000492407 TMEM117Q9H0C3 514 aa10.33□□□□□ -0.76
HDAC3-212ENST00000492407 CDHR5Q9HBB8 845 aa10.33□□□□□ -0.76
HDAC3-212ENST00000492407 NGRNQ9NPE2 291 aaKnown RBP10.33□□□□□ -0.76
HDAC3-212ENST00000492407 TLR9Q9NR96 1032 aa10.33□□□□□ -0.76
HDAC3-212ENST00000492407 CLEC1BQ9P126 229 aa10.33□□□□□ -0.76
HDAC3-212ENST00000492407 TBKBP1A7MCY6 615 aa10.32□□□□□ -0.76
HDAC3-212ENST00000492407 LOC730098B7Z3J9 87 aa10.32□□□□□ -0.76
HDAC3-212ENST00000492407 DDX39AO00148 427 aaKnown RBP10.32□□□□□ -0.76
HDAC3-212ENST00000492407 FSCN2O14926 492 aa10.32□□□□□ -0.76
HDAC3-212ENST00000492407 MGEA5O60502 916 aa10.32□□□□□ -0.76
HDAC3-212ENST00000492407 FGF18O76093 207 aa10.32□□□□□ -0.76
HDAC3-212ENST00000492407 EOMESO95936 686 aa10.32□□□□□ -0.76
HDAC3-212ENST00000492407 ZSCAN20P17040 1043 aaPredicted RBP10.32□□□□□ -0.76
HDAC3-212ENST00000492407 EIF4BP23588 611 aaKnown RBP10.32□□□□□ -0.76
HDAC3-212ENST00000492407 PPM1AP35813 382 aa10.32□□□□□ -0.76
HDAC3-212ENST00000492407 NRIP1P48552 1158 aa10.32□□□□□ -0.76
HDAC3-212ENST00000492407 JAK3P52333 1124 aa10.32□□□□□ -0.76
HDAC3-212ENST00000492407 NTRK3Q16288 839 aa10.32□□□□□ -0.76
HDAC3-212ENST00000492407 TMEM266Q2M3C6 531 aa10.32□□□□□ -0.76
HDAC3-212ENST00000492407 PRR16Q569H4 304 aa10.32□□□□□ -0.76
HDAC3-212ENST00000492407 FAM228AQ86W67 206 aa10.32□□□□□ -0.76
HDAC3-212ENST00000492407 RNF135Q8IUD6 432 aa10.32□□□□□ -0.76
HDAC3-212ENST00000492407 TMEM40Q8WWA1 233 aa10.32□□□□□ -0.76
HDAC3-212ENST00000492407 LENG9Q96B70 501 aa10.32□□□□□ -0.76
HDAC3-212ENST00000492407 PRRX2Q99811 253 aa10.32□□□□□ -0.76
HDAC3-212ENST00000492407 ADAMTS10Q9H324 1103 aa10.32□□□□□ -0.76
HDAC3-212ENST00000492407 TLE6Q9H808 572 aa10.32□□□□□ -0.76
HDAC3-212ENST00000492407 CHST12Q9NRB3 414 aa10.32□□□□□ -0.76
HDAC3-212ENST00000492407 TYW1Q9NV66 732 aaKnown RBP10.32□□□□□ -0.76
HDAC3-212ENST00000492407 GABBR1Q9UBS5 961 aa10.32□□□□□ -0.76
HDAC3-212ENST00000492407 GINS2Q9Y248 185 aa10.32□□□□□ -0.76
HDAC3-212ENST00000492407 DOCK5Q9H7D0 1870 aa10.32□□□□□ -0.76
HDAC3-212ENST00000492407 LINC01565O15544 149 aa10.31□□□□□ -0.76
HDAC3-212ENST00000492407 REC8O95072 547 aa10.31□□□□□ -0.76
HDAC3-212ENST00000492407 OATP04181 439 aa10.31□□□□□ -0.76
HDAC3-212ENST00000492407 RPS6KB1P23443 525 aa10.31□□□□□ -0.76
HDAC3-212ENST00000492407 GTF2F1P35269 517 aaKnown RBP eCLIP10.31□□□□□ -0.76
HDAC3-212ENST00000492407 KRT17Q04695 432 aa10.31□□□□□ -0.76
HDAC3-212ENST00000492407 APOBRQ0VD83 1088 aa10.31□□□□□ -0.76
HDAC3-212ENST00000492407 DUSP6Q16828 381 aa10.31□□□□□ -0.76
HDAC3-212ENST00000492407 KIZQ2M2Z5 673 aa10.31□□□□□ -0.76
HDAC3-212ENST00000492407 Q4G0T1 1027 aa10.31□□□□□ -0.76
HDAC3-212ENST00000492407 PAN2Q504Q3 1202 aaKnown RBP10.31□□□□□ -0.76
HDAC3-212ENST00000492407 SPOUT1Q5T280 376 aaKnown RBP10.31□□□□□ -0.76
HDAC3-212ENST00000492407 FAM102BQ5T8I3 360 aa10.31□□□□□ -0.76
HDAC3-212ENST00000492407 GALNT17Q6IS24 598 aa10.31□□□□□ -0.76
HDAC3-212ENST00000492407 EFCAB12Q6NXP0 572 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms