RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 DNAJC18Q9H819 358 aa16.52■□□□□ 0.23
TNFRSF1B-203ENST00000492361 USTQ9Y2C2 406 aa16.52■□□□□ 0.23
TNFRSF1B-203ENST00000492361 MYO1FO00160 1098 aa16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 VIMP08670 466 aaKnown RBP16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 PSMC2P35998 433 aaKnown RBP16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 MAP2K1Q02750 393 aaPredicted RBP16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 FIGNQ5HY92 759 aa16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 USP38Q8NB14 1042 aa16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 SLC30A5Q8TAD4 765 aa16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 PPM1EQ8WY54 764 aa16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 CCDC114Q96M63 670 aa16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 SCLT1Q96NL6 688 aa16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 PSD3Q9NYI0 1048 aa16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 NR2E1Q9Y466 385 aa16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 AFF2P51816 1311 aa16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 ZNF233A6NK53 670 aa16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 POLR2MP0CAP2 368 aa16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 ARP10275 920 aa16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 STAT2P52630 851 aa16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 SOX10P56693 466 aa16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 MYL7Q01449 175 aa16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 OGFOD1Q8N543 542 aa16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 LMBR1Q8WVP7 490 aa16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 CCDC17Q96LX7 622 aa16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 GSTTP1A0A1W2PQM5 241 aa16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 JAG1P78504 1218 aa16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 HP1BP3Q5SSJ5 553 aaPredicted RBP16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 CCDC50Q8IVM0 306 aa16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 CCDC26Q8TAB7 109 aa16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 SLC20A1Q8WUM9 679 aa16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 KAT5Q92993 513 aa16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 THOC1Q96FV9 657 aaKnown RBP16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 THAP2Q9H0W7 228 aa16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 TSKSQ9UJT2 592 aa16.51■□□□□ 0.23
TNFRSF1B-203ENST00000492361 BCL9LQ86UU0 1499 aa16.5■□□□□ 0.23
TNFRSF1B-203ENST00000492361 A0A1W2PRG0 241 aa16.5■□□□□ 0.23
TNFRSF1B-203ENST00000492361 NF2P35240 595 aa16.5■□□□□ 0.23
TNFRSF1B-203ENST00000492361 HDLBPQ00341 1268 aaKnown RBP16.5■□□□□ 0.23
TNFRSF1B-203ENST00000492361 SETQ01105 290 aaPredicted RBP16.5■□□□□ 0.23
TNFRSF1B-203ENST00000492361 RINT1Q6NUQ1 792 aa16.5■□□□□ 0.23
TNFRSF1B-203ENST00000492361 PALB2Q86YC2 1186 aa16.5■□□□□ 0.23
TNFRSF1B-203ENST00000492361 RNF10Q8N5U6 811 aaKnown RBP16.5■□□□□ 0.23
TNFRSF1B-203ENST00000492361 VIPAS39Q9H9C1 493 aa16.5■□□□□ 0.23
TNFRSF1B-203ENST00000492361 KCNK9Q9NPC2 374 aa16.5■□□□□ 0.23
TNFRSF1B-203ENST00000492361 GOLGA6L10A0A0M3HER8 536 aa16.5■□□□□ 0.23
TNFRSF1B-203ENST00000492361 MTM1Q13496 603 aa16.5■□□□□ 0.23
TNFRSF1B-203ENST00000492361 MIER3Q7Z3K6 550 aa16.5■□□□□ 0.23
TNFRSF1B-203ENST00000492361 ANKRD42Q8N9B4 389 aa16.5■□□□□ 0.23
TNFRSF1B-203ENST00000492361 CABS1Q96KC9 395 aa16.5■□□□□ 0.23
TNFRSF1B-203ENST00000492361 PURBQ96QR8 312 aaKnown RBP16.5■□□□□ 0.23
TNFRSF1B-203ENST00000492361 POP1Q99575 1024 aaKnown RBP16.5■□□□□ 0.23
TNFRSF1B-203ENST00000492361 UBR2Q8IWV8 1755 aa16.5■□□□□ 0.23
TNFRSF1B-203ENST00000492361 PHF20L1A8MW92 1017 aa16.49■□□□□ 0.23
TNFRSF1B-203ENST00000492361 EIF3HO15372 352 aaKnown RBP eCLIP16.49■□□□□ 0.23
TNFRSF1B-203ENST00000492361 SLC12A3P55017 1021 aa16.49■□□□□ 0.23
TNFRSF1B-203ENST00000492361 PEX3P56589 373 aa16.49■□□□□ 0.23
TNFRSF1B-203ENST00000492361 PPP1R7Q15435 360 aa16.49■□□□□ 0.23
TNFRSF1B-203ENST00000492361 CBWD6Q4V339 395 aa16.49■□□□□ 0.23
TNFRSF1B-203ENST00000492361 CBWD3Q5JTY5 395 aa16.49■□□□□ 0.23
TNFRSF1B-203ENST00000492361 CBWD5Q5RIA9 395 aa16.49■□□□□ 0.23
TNFRSF1B-203ENST00000492361 PPP1R9AQ9ULJ8 1098 aa16.49■□□□□ 0.23
TNFRSF1B-203ENST00000492361 CD2APQ9Y5K6 639 aa16.49■□□□□ 0.23
TNFRSF1B-203ENST00000492361 CACNA1SQ13698 1873 aa16.49■□□□□ 0.23
TNFRSF1B-203ENST00000492361 PCNTO95613 3336 aa16.49■□□□□ 0.23
TNFRSF1B-203ENST00000492361 H0YIN7 160 aa16.49■□□□□ 0.23
TNFRSF1B-203ENST00000492361 DDX3XO00571 662 aaKnown RBP eCLIP16.49■□□□□ 0.237e-14■■■■□ 22.4
TNFRSF1B-203ENST00000492361 SLC16A4O15374 487 aa16.49■□□□□ 0.23
TNFRSF1B-203ENST00000492361 CDR1P51861 262 aa16.49■□□□□ 0.23
TNFRSF1B-203ENST00000492361 CETN1Q12798 172 aa16.49■□□□□ 0.23
TNFRSF1B-203ENST00000492361 SP8Q8IXZ3 490 aa16.49■□□□□ 0.23
TNFRSF1B-203ENST00000492361 AGBL1Q96MI9 1066 aa16.49■□□□□ 0.23
TNFRSF1B-203ENST00000492361 GLIS2Q9BZE0 524 aaPredicted RBP16.49■□□□□ 0.23
TNFRSF1B-203ENST00000492361 FOXN3O00409 490 aaPredicted RBP16.49■□□□□ 0.23
TNFRSF1B-203ENST00000492361 SPATA31C1P0DKV0 1188 aa16.49■□□□□ 0.23
TNFRSF1B-203ENST00000492361 HSD17B3P37058 310 aa16.49■□□□□ 0.23
TNFRSF1B-203ENST00000492361 MAGEA9P43362 315 aa16.49■□□□□ 0.23
TNFRSF1B-203ENST00000492361 LXNQ9BS40 222 aa16.49■□□□□ 0.23
TNFRSF1B-203ENST00000492361 KCTD10Q9H3F6 313 aa16.49■□□□□ 0.23
TNFRSF1B-203ENST00000492361 TAF1DQ9H5J8 278 aaPredicted RBP16.49■□□□□ 0.23
TNFRSF1B-203ENST00000492361 TBK1Q9UHD2 729 aa16.49■□□□□ 0.23
TNFRSF1B-203ENST00000492361 CCPG1Q9ULG6 757 aa16.49■□□□□ 0.23
TNFRSF1B-203ENST00000492361 FTLP02792 175 aaPredicted RBP16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 RPA1P27694 616 aa16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 LSP1P33241 339 aa16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 NPEPPSP55786 919 aa16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 GABPAQ06546 454 aa16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 LRRC14Q15048 493 aa16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 MEI1Q5TIA1 1274 aa16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 CCDC121Q6ZUS5 278 aa16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 TADA2BQ86TJ2 420 aa16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 TYW1Q9NV66 732 aaKnown RBP16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 EMSYQ7Z589 1322 aa16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 DLG4P78352 724 aa16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 CPNE8Q86YQ8 564 aa16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 LARGE2Q8N3Y3 721 aa16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 ZSWIM2Q8NEG5 633 aa16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 TPCN2Q8NHX9 752 aa16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 ARHGEF26Q96DR7 871 aa16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 NEUROG2Q9H2A3 272 aa16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 ARHGEF10LQ9HCE6 1279 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms