RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-231ENST00000492170 TBKBP1A7MCY6 615 aa17.34■□□□□ 0.37
MRPL55-231ENST00000492170 PPFIA3O75145 1194 aa17.34■□□□□ 0.37
MRPL55-231ENST00000492170 TBX10O75333 385 aa17.34■□□□□ 0.37
MRPL55-231ENST00000492170 DNAJB1P25685 340 aa17.34■□□□□ 0.37
MRPL55-231ENST00000492170 TMOD1P28289 359 aa17.34■□□□□ 0.37
MRPL55-231ENST00000492170 PDIA3P30101 505 aaKnown RBP17.34■□□□□ 0.37
MRPL55-231ENST00000492170 GTF2F1P35269 517 aaKnown RBP eCLIP17.34■□□□□ 0.37
MRPL55-231ENST00000492170 NDUFV1P49821 464 aa17.34■□□□□ 0.37
MRPL55-231ENST00000492170 CCT2P78371 535 aaKnown RBP17.34■□□□□ 0.37
MRPL55-231ENST00000492170 DLX2Q07687 328 aaPredicted RBP17.34■□□□□ 0.37
MRPL55-231ENST00000492170 SMAD4Q13485 552 aaKnown RBP17.34■□□□□ 0.37
MRPL55-231ENST00000492170 FAM228AQ86W67 206 aa17.34■□□□□ 0.37
MRPL55-231ENST00000492170 TRIM22Q8IYM9 498 aa17.34■□□□□ 0.37
MRPL55-231ENST00000492170 POP1Q99575 1024 aaKnown RBP17.34■□□□□ 0.37
MRPL55-231ENST00000492170 NCOA5Q9HCD5 579 aaKnown RBP17.34■□□□□ 0.37
MRPL55-231ENST00000492170 SH3GLB2Q9NR46 395 aa17.34■□□□□ 0.37
MRPL55-231ENST00000492170 AKT3Q9Y243 479 aa17.34■□□□□ 0.37
MRPL55-231ENST00000492170 ARIH1Q9Y4X5 557 aaPredicted RBP17.34■□□□□ 0.37
MRPL55-231ENST00000492170 PCDHB12Q9Y5F1 795 aa17.34■□□□□ 0.37
MRPL55-231ENST00000492170 MYH9P35579 1960 aaKnown RBP17.33■□□□□ 0.37
MRPL55-231ENST00000492170 C9IYK1 514 aa17.33■□□□□ 0.36
MRPL55-231ENST00000492170 MBTPS2O43462 519 aa17.33■□□□□ 0.36
MRPL55-231ENST00000492170 DCXO43602 365 aa17.33■□□□□ 0.36
MRPL55-231ENST00000492170 GAS7O60861 476 aa17.33■□□□□ 0.36
MRPL55-231ENST00000492170 USP11P51784 963 aa17.33■□□□□ 0.36
MRPL55-231ENST00000492170 CLCN3P51790 818 aa17.33■□□□□ 0.36
MRPL55-231ENST00000492170 EVCP57679 992 aa17.33■□□□□ 0.36
MRPL55-231ENST00000492170 NLRP5P59047 1200 aa17.33■□□□□ 0.36
MRPL55-231ENST00000492170 SMAD2Q15796 467 aaKnown RBP17.33■□□□□ 0.36
MRPL55-231ENST00000492170 ZNF710Q8N1W2 664 aa17.33■□□□□ 0.36
MRPL55-231ENST00000492170 TEKT3Q9BXF9 490 aa17.33■□□□□ 0.36
MRPL55-231ENST00000492170 C22orf23Q9BZE7 217 aa17.33■□□□□ 0.36
MRPL55-231ENST00000492170 ATP6V0A4Q9HBG4 840 aa17.33■□□□□ 0.36
MRPL55-231ENST00000492170 DISC1Q9NRI5 854 aa17.33■□□□□ 0.36
MRPL55-231ENST00000492170 CD207Q9UJ71 328 aa17.33■□□□□ 0.36
MRPL55-231ENST00000492170 EVPLQ92817 2033 aa17.33■□□□□ 0.36
MRPL55-231ENST00000492170 PRR33A8MZF0 331 aa17.32■□□□□ 0.36
MRPL55-231ENST00000492170 MSH4O15457 936 aa17.32■□□□□ 0.36
MRPL55-231ENST00000492170 LINC01565O15544 149 aa17.32■□□□□ 0.36
MRPL55-231ENST00000492170 GPR32O75388 356 aa17.32■□□□□ 0.36
MRPL55-231ENST00000492170 OATP04181 439 aa17.32■□□□□ 0.36
MRPL55-231ENST00000492170 SFNP31947 248 aa17.32■□□□□ 0.36
MRPL55-231ENST00000492170 IRS1P35568 1242 aa17.32■□□□□ 0.36
MRPL55-231ENST00000492170 JAK3P52333 1124 aa17.32■□□□□ 0.36
MRPL55-231ENST00000492170 PRKCEQ02156 737 aa17.32■□□□□ 0.36
MRPL55-231ENST00000492170 UBE3AQ05086 875 aa17.32■□□□□ 0.36
MRPL55-231ENST00000492170 ADAM15Q13444 863 aa17.32■□□□□ 0.36
MRPL55-231ENST00000492170 CSPP1Q1MSJ5 1256 aa17.32■□□□□ 0.36
MRPL55-231ENST00000492170 LRCH2Q5VUJ6 765 aa17.32■□□□□ 0.36
MRPL55-231ENST00000492170 EFCAB12Q6NXP0 572 aa17.32■□□□□ 0.36
MRPL55-231ENST00000492170 RUFY3Q7L099 469 aa17.32■□□□□ 0.36
MRPL55-231ENST00000492170 ADGRD2Q7Z7M1 963 aa17.32■□□□□ 0.36
MRPL55-231ENST00000492170 RIT2Q99578 217 aa17.32■□□□□ 0.36
MRPL55-231ENST00000492170 UPF3BQ9BZI7 483 aaKnown RBP17.32■□□□□ 0.36
MRPL55-231ENST00000492170 ELAC1Q9H777 363 aaKnown RBP17.32■□□□□ 0.36
MRPL55-231ENST00000492170 NRBP2Q9NSY0 501 aa17.32■□□□□ 0.36
MRPL55-231ENST00000492170 TMEM161AQ9NX61 479 aa17.32■□□□□ 0.36
MRPL55-231ENST00000492170 C19orf67A6NJJ6 358 aa17.31■□□□□ 0.36
MRPL55-231ENST00000492170 CPLX1O14810 134 aa17.31■□□□□ 0.36
MRPL55-231ENST00000492170 EPB41L2O43491 1005 aaKnown RBP17.31■□□□□ 0.36
MRPL55-231ENST00000492170 CHMP2AO43633 222 aa17.31■□□□□ 0.36
MRPL55-231ENST00000492170 ZNF862O60290 1169 aa17.31■□□□□ 0.36
MRPL55-231ENST00000492170 NRIP1P48552 1158 aa17.31■□□□□ 0.36
MRPL55-231ENST00000492170 NLRP11P59045 1033 aaKnown RBP17.31■□□□□ 0.36
MRPL55-231ENST00000492170 SSRP1Q08945 709 aaKnown RBP17.31■□□□□ 0.36
MRPL55-231ENST00000492170 FAM102BQ5T8I3 360 aa17.31■□□□□ 0.36
MRPL55-231ENST00000492170 THNSL1Q8IYQ7 743 aa17.31■□□□□ 0.36
MRPL55-231ENST00000492170 LRRC71Q8N4P6 559 aa17.31■□□□□ 0.36
MRPL55-231ENST00000492170 LINC01465Q8N7H1 131 aa17.31■□□□□ 0.36
MRPL55-231ENST00000492170 EFHBQ8N7U6 833 aa17.31■□□□□ 0.36
MRPL55-231ENST00000492170 HOXA2O43364 376 aa17.3■□□□□ 0.36
MRPL55-231ENST00000492170 ZSCAN20P17040 1043 aaPredicted RBP17.3■□□□□ 0.36
MRPL55-231ENST00000492170 LAG3P18627 525 aa17.3■□□□□ 0.36
MRPL55-231ENST00000492170 FAM189BP81408 668 aa17.3■□□□□ 0.36
MRPL55-231ENST00000492170 TOB2Q14106 344 aaPredicted RBP17.3■□□□□ 0.36
MRPL55-231ENST00000492170 DSC3Q14574 896 aa17.3■□□□□ 0.36
MRPL55-231ENST00000492170 COLGALT1Q8NBJ5 622 aa17.3■□□□□ 0.36
MRPL55-231ENST00000492170 RDM1Q8NG50 284 aa17.3■□□□□ 0.36
MRPL55-231ENST00000492170 MICAL1Q8TDZ2 1067 aa17.3■□□□□ 0.36
MRPL55-231ENST00000492170 TBCKQ8TEA7 893 aa17.3■□□□□ 0.36
MRPL55-231ENST00000492170 SLC5A5Q92911 643 aa17.3■□□□□ 0.36
MRPL55-231ENST00000492170 MSLNLQ96KJ4 702 aa17.3■□□□□ 0.36
MRPL55-231ENST00000492170 SCLT1Q96NL6 688 aa17.3■□□□□ 0.36
MRPL55-231ENST00000492170 TMEM117Q9H0C3 514 aa17.3■□□□□ 0.36
MRPL55-231ENST00000492170 ADAMTS10Q9H324 1103 aa17.3■□□□□ 0.36
MRPL55-231ENST00000492170 UNC45AQ9H3U1 944 aa17.3■□□□□ 0.36
MRPL55-231ENST00000492170 ZSWIM6Q9HCJ5 1215 aa17.3■□□□□ 0.36
MRPL55-231ENST00000492170 TLR9Q9NR96 1032 aa17.3■□□□□ 0.36
MRPL55-231ENST00000492170 TYW1Q9NV66 732 aaKnown RBP17.3■□□□□ 0.36
MRPL55-231ENST00000492170 PCDHA4Q9UN74 947 aa17.3■□□□□ 0.36
MRPL55-231ENST00000492170 CYP46A1Q9Y6A2 500 aa17.3■□□□□ 0.36
MRPL55-231ENST00000492170 C5orf42Q9H799 3197 aa17.3■□□□□ 0.36
MRPL55-231ENST00000492170 FNDC1Q4ZHG4 1894 aaPredicted RBP17.29■□□□□ 0.36
MRPL55-231ENST00000492170 FSD2A1L4K1 749 aa17.29■□□□□ 0.36
MRPL55-231ENST00000492170 EDIL3O43854 480 aa17.29■□□□□ 0.36
MRPL55-231ENST00000492170 FGF18O76093 207 aa17.29■□□□□ 0.36
MRPL55-231ENST00000492170 DEXIO95424 95 aa17.29■□□□□ 0.36
MRPL55-231ENST00000492170 FGFR1P11362 822 aa17.29■□□□□ 0.36
MRPL55-231ENST00000492170 EIF4BP23588 611 aaKnown RBP17.29■□□□□ 0.36
MRPL55-231ENST00000492170 TBC1D8BQ0IIM8 1120 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms