RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 CTNNB1P35222 781 aa16.87■□□□□ 0.29
TOM1-215ENST00000491987 TFF2Q03403 129 aa16.87■□□□□ 0.29
TOM1-215ENST00000491987 TBC1D8BQ0IIM8 1120 aa16.87■□□□□ 0.29
TOM1-215ENST00000491987 GPM6BQ13491 265 aa16.87■□□□□ 0.29
TOM1-215ENST00000491987 BTG3Q14201 252 aaPredicted RBP16.87■□□□□ 0.29
TOM1-215ENST00000491987 MTERF2Q49AM1 385 aa16.87■□□□□ 0.29
TOM1-215ENST00000491987 XKR3Q5GH77 459 aa16.87■□□□□ 0.29
TOM1-215ENST00000491987 FAM228AQ86W67 206 aa16.87■□□□□ 0.29
TOM1-215ENST00000491987 ZNF689Q96CS4 500 aaPredicted RBP16.87■□□□□ 0.29
TOM1-215ENST00000491987 ZNF668Q96K58 619 aaPredicted RBP16.87■□□□□ 0.29
TOM1-215ENST00000491987 FAM20AQ96MK3 541 aa16.87■□□□□ 0.29
TOM1-215ENST00000491987 NAP1L4Q99733 375 aaKnown RBP16.87■□□□□ 0.29
TOM1-215ENST00000491987 SH2D3AQ9BRG2 576 aa16.87■□□□□ 0.29
TOM1-215ENST00000491987 VAV3Q9UKW4 847 aa16.87■□□□□ 0.29
TOM1-215ENST00000491987 A0A0C4DFX4 3053 aa16.87■□□□□ 0.29
TOM1-215ENST00000491987 H3BNC9 293 aa16.86■□□□□ 0.29
TOM1-215ENST00000491987 EML1O00423 815 aa16.86■□□□□ 0.29
TOM1-215ENST00000491987 GPR182O15218 404 aa16.86■□□□□ 0.29
TOM1-215ENST00000491987 MARCH6O60337 910 aa16.86■□□□□ 0.29
TOM1-215ENST00000491987 MGEA5O60502 916 aa16.86■□□□□ 0.29
TOM1-215ENST00000491987 STBD1O95210 358 aa16.86■□□□□ 0.29
TOM1-215ENST00000491987 STAG3L1P0CL83 205 aa16.86■□□□□ 0.29
TOM1-215ENST00000491987 TMOD1P28289 359 aa16.86■□□□□ 0.29
TOM1-215ENST00000491987 NLRP11P59045 1033 aaKnown RBP16.86■□□□□ 0.29
TOM1-215ENST00000491987 PPP2R5CQ13362 524 aa16.86■□□□□ 0.29
TOM1-215ENST00000491987 TRIM29Q14134 588 aa16.86■□□□□ 0.29
TOM1-215ENST00000491987 TARBP2Q15633 366 aaKnown RBP16.86■□□□□ 0.29
TOM1-215ENST00000491987 ODR4Q5SWX8 454 aa16.86■□□□□ 0.29
TOM1-215ENST00000491987 CCDC83Q8IWF9 413 aa16.86■□□□□ 0.29
TOM1-215ENST00000491987 HAS1Q92839 578 aa16.86■□□□□ 0.29
TOM1-215ENST00000491987 TNFRSF25Q93038 417 aa16.86■□□□□ 0.29
TOM1-215ENST00000491987 ADAM2Q99965 735 aa16.86■□□□□ 0.29
TOM1-215ENST00000491987 LRFN2Q9ULH4 789 aa16.86■□□□□ 0.29
TOM1-215ENST00000491987 LIMCH1Q9UPQ0 1083 aa16.86■□□□□ 0.29
TOM1-215ENST00000491987 NLRC5Q86WI3 1866 aa16.86■□□□□ 0.29
TOM1-215ENST00000491987 EVPLQ92817 2033 aa16.86■□□□□ 0.29
TOM1-215ENST00000491987 RALGAPA2Q2PPJ7 1873 aa16.85■□□□□ 0.29
TOM1-215ENST00000491987 DENND3A2RUS2 1198 aa16.85■□□□□ 0.29
TOM1-215ENST00000491987 DDX11L8A8MPP1 907 aa16.85■□□□□ 0.29
TOM1-215ENST00000491987 BTBD18B2RXH4 712 aa16.85■□□□□ 0.29
TOM1-215ENST00000491987 LINC00271P0C7V0 271 aa16.85■□□□□ 0.29
TOM1-215ENST00000491987 GATMP50440 423 aa16.85■□□□□ 0.29
TOM1-215ENST00000491987 PSMC5P62195 406 aa16.85■□□□□ 0.29
TOM1-215ENST00000491987 PAN2Q504Q3 1202 aaKnown RBP16.85■□□□□ 0.29
TOM1-215ENST00000491987 DIS3L2Q8IYB7 885 aaKnown RBP16.85■□□□□ 0.29
TOM1-215ENST00000491987 CRIPAKQ8N1N5 446 aa16.85■□□□□ 0.29
TOM1-215ENST00000491987 IL27Q8NEV9 243 aa16.85■□□□□ 0.29
TOM1-215ENST00000491987 NIFKQ9BYG3 293 aaKnown RBP16.85■□□□□ 0.29
TOM1-215ENST00000491987 ADAMTS10Q9H324 1103 aa16.85■□□□□ 0.29
TOM1-215ENST00000491987 COG5Q9UP83 839 aa16.85■□□□□ 0.29
TOM1-215ENST00000491987 MRPL42Q9Y6G3 142 aaKnown RBP16.85■□□□□ 0.29
TOM1-215ENST00000491987 TTC3P53804 2025 aa16.85■□□□□ 0.29
TOM1-215ENST00000491987 TBX3O15119 743 aa16.84■□□□□ 0.29
TOM1-215ENST00000491987 BMPR1AP36894 532 aa16.84■□□□□ 0.29
TOM1-215ENST00000491987 SARSP49591 514 aaKnown RBP16.84■□□□□ 0.29
TOM1-215ENST00000491987 GPC3P51654 580 aa16.84■□□□□ 0.29
TOM1-215ENST00000491987 GUCY1B3Q02153 619 aa16.84■□□□□ 0.29
TOM1-215ENST00000491987 DRP2Q13474 957 aa16.84■□□□□ 0.29
TOM1-215ENST00000491987 PTPROQ16827 1216 aa16.84■□□□□ 0.29
TOM1-215ENST00000491987 PLA2G4FQ68DD2 849 aa16.84■□□□□ 0.29
TOM1-215ENST00000491987 NCAPH2Q6IBW4 605 aa16.84■□□□□ 0.29
TOM1-215ENST00000491987 ANO5Q75V66 913 aa16.84■□□□□ 0.29
TOM1-215ENST00000491987 CMTR2Q8IYT2 770 aaKnown RBP16.84■□□□□ 0.29
TOM1-215ENST00000491987 HLA-CQ95604 372 aa16.84■□□□□ 0.29
TOM1-215ENST00000491987 MRPL38Q96DV4 380 aaKnown RBP16.84■□□□□ 0.29
TOM1-215ENST00000491987 SCLT1Q96NL6 688 aa16.84■□□□□ 0.29
TOM1-215ENST00000491987 KIF2CQ99661 725 aa16.84■□□□□ 0.29
TOM1-215ENST00000491987 RGS18Q9NS28 235 aa16.84■□□□□ 0.29
TOM1-215ENST00000491987 RWDD3Q9Y3V2 267 aa16.84■□□□□ 0.29
TOM1-215ENST00000491987 QARSP47897 775 aaKnown RBP16.83■□□□□ 0.28
TOM1-215ENST00000491987 KCNQ1P51787 676 aa16.83■□□□□ 0.28
TOM1-215ENST00000491987 AAK1Q2M2I8 961 aa16.83■□□□□ 0.28
TOM1-215ENST00000491987 ADAMTS19Q8TE59 1207 aa16.83■□□□□ 0.28
TOM1-215ENST00000491987 NLRP7Q8WX94 980 aa16.83■□□□□ 0.28
TOM1-215ENST00000491987 CLP1Q92989 425 aaKnown RBP16.83■□□□□ 0.28
TOM1-215ENST00000491987 CEP89Q96ST8 783 aa16.83■□□□□ 0.28
TOM1-215ENST00000491987 C1orf112Q9NSG2 853 aa16.83■□□□□ 0.28
TOM1-215ENST00000491987 WRAP73Q9P2S5 460 aaPredicted RBP16.83■□□□□ 0.28
TOM1-215ENST00000491987 PCDHB7Q9Y5E2 793 aa16.83■□□□□ 0.28
TOM1-215ENST00000491987 REV3LO60673 3130 aa16.83■□□□□ 0.28
TOM1-215ENST00000491987 C9IYK1 514 aa16.82■□□□□ 0.28
TOM1-215ENST00000491987 C5orf67F2Z3F1 127 aa16.82■□□□□ 0.28
TOM1-215ENST00000491987 DKC1O60832 514 aaKnown RBP eCLIP16.82■□□□□ 0.28
TOM1-215ENST00000491987 BAG4O95429 457 aaKnown RBP16.82■□□□□ 0.28
TOM1-215ENST00000491987 RB1P06400 928 aa16.82■□□□□ 0.28
TOM1-215ENST00000491987 P4HBP07237 508 aaKnown RBP16.82■□□□□ 0.28
TOM1-215ENST00000491987 EIF4BP23588 611 aaKnown RBP16.82■□□□□ 0.28
TOM1-215ENST00000491987 DSC3Q14574 896 aa16.82■□□□□ 0.28
TOM1-215ENST00000491987 EPHA7Q15375 998 aa16.82■□□□□ 0.28
TOM1-215ENST00000491987 TIGD5Q53EQ6 642 aa16.82■□□□□ 0.28
TOM1-215ENST00000491987 FAM43BQ6ZT52 329 aaPredicted RBP16.82■□□□□ 0.28
TOM1-215ENST00000491987 SLC24A5Q71RS6 500 aa16.82■□□□□ 0.28
TOM1-215ENST00000491987 SLFN12Q8IYM2 578 aa16.82■□□□□ 0.28
TOM1-215ENST00000491987 LXNQ9BS40 222 aa16.82■□□□□ 0.28
TOM1-215ENST00000491987 C11orf84Q9BUA3 381 aaPredicted RBP16.82■□□□□ 0.28
TOM1-215ENST00000491987 RGL1Q9NZL6 768 aa16.82■□□□□ 0.28
TOM1-215ENST00000491987 XIRP2A4UGR9 3374 aa16.81■□□□□ 0.28
TOM1-215ENST00000491987 IGKV6-21A0A0C4DH24 114 aa16.81■□□□□ 0.28
TOM1-215ENST00000491987 WNT7AO00755 349 aa16.81■□□□□ 0.28
TOM1-215ENST00000491987 GRM6O15303 877 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms