RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 HAS1Q92839 578 aa16.88■□□□□ 0.29
CDC42SE1-205ENST00000491825 ZNF689Q96CS4 500 aaPredicted RBP16.88■□□□□ 0.29
CDC42SE1-205ENST00000491825 TEKT3Q9BXF9 490 aa16.88■□□□□ 0.29
CDC42SE1-205ENST00000491825 FAM49AQ9H0Q0 323 aaPredicted RBP16.88■□□□□ 0.29
CDC42SE1-205ENST00000491825 TCEAL9Q9UHQ7 104 aa16.88■□□□□ 0.29
CDC42SE1-205ENST00000491825 TRPC6Q9Y210 931 aa16.88■□□□□ 0.29
CDC42SE1-205ENST00000491825 SQORQ9Y6N5 450 aa16.88■□□□□ 0.29
CDC42SE1-205ENST00000491825 ZSCAN22P10073 491 aaPredicted RBP16.87■□□□□ 0.29
CDC42SE1-205ENST00000491825 KCNA5P22460 613 aa16.87■□□□□ 0.29
CDC42SE1-205ENST00000491825 CD52P31358 61 aa16.87■□□□□ 0.29
CDC42SE1-205ENST00000491825 MCM7P33993 719 aa16.87■□□□□ 0.29
CDC42SE1-205ENST00000491825 STAT5BP51692 787 aa16.87■□□□□ 0.29
CDC42SE1-205ENST00000491825 CALCRLQ16602 461 aa16.87■□□□□ 0.29
CDC42SE1-205ENST00000491825 FIBCD1Q8N539 461 aa16.87■□□□□ 0.29
CDC42SE1-205ENST00000491825 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.87■□□□□ 0.29
CDC42SE1-205ENST00000491825 NEK9Q8TD19 979 aa16.87■□□□□ 0.29
CDC42SE1-205ENST00000491825 KHSRPQ92945 711 aaKnown RBP eCLIP16.87■□□□□ 0.29
CDC42SE1-205ENST00000491825 CLP1Q92989 425 aaKnown RBP16.87■□□□□ 0.29
CDC42SE1-205ENST00000491825 MTMR9Q96QG7 549 aa16.87■□□□□ 0.29
CDC42SE1-205ENST00000491825 CD320Q9NPF0 282 aa16.87■□□□□ 0.29
CDC42SE1-205ENST00000491825 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.87■□□□□ 0.29
CDC42SE1-205ENST00000491825 RAPGEFL1Q9UHV5 662 aa16.87■□□□□ 0.29
CDC42SE1-205ENST00000491825 VAV3Q9UKW4 847 aa16.87■□□□□ 0.29
CDC42SE1-205ENST00000491825 PCDHA2Q9Y5H9 948 aa16.87■□□□□ 0.29
CDC42SE1-205ENST00000491825 SMIM35A0A1B0GVV1 85 aa16.86■□□□□ 0.29
CDC42SE1-205ENST00000491825 LAD1O00515 517 aa16.86■□□□□ 0.29
CDC42SE1-205ENST00000491825 SFNP31947 248 aa16.86■□□□□ 0.29
CDC42SE1-205ENST00000491825 DDIT3P35638 169 aa16.86■□□□□ 0.29
CDC42SE1-205ENST00000491825 SLC26A2P50443 739 aa16.86■□□□□ 0.29
CDC42SE1-205ENST00000491825 PPP2R5CQ13362 524 aa16.86■□□□□ 0.29
CDC42SE1-205ENST00000491825 ABHD15Q6UXT9 468 aa16.86■□□□□ 0.29
CDC42SE1-205ENST00000491825 RTN4RL1Q86UN2 441 aaPredicted RBP16.86■□□□□ 0.29
CDC42SE1-205ENST00000491825 CCDC60Q8IWA6 550 aaPredicted RBP16.86■□□□□ 0.29
CDC42SE1-205ENST00000491825 BANK1Q8NDB2 785 aa16.86■□□□□ 0.29
CDC42SE1-205ENST00000491825 RDM1Q8NG50 284 aa16.86■□□□□ 0.29
CDC42SE1-205ENST00000491825 C1QTNF1Q9BXJ1 281 aa16.86■□□□□ 0.29
CDC42SE1-205ENST00000491825 EPHX3Q9H6B9 360 aa16.86■□□□□ 0.29
CDC42SE1-205ENST00000491825 TSHZ2Q9NRE2 1034 aa16.86■□□□□ 0.29
CDC42SE1-205ENST00000491825 PCDHB6Q9Y5E3 794 aa16.86■□□□□ 0.29
CDC42SE1-205ENST00000491825 TRPV2Q9Y5S1 764 aa16.86■□□□□ 0.29
CDC42SE1-205ENST00000491825 IGSF9BQ9UPX0 1349 aa16.86■□□□□ 0.29
CDC42SE1-205ENST00000491825 KDM3AQ9Y4C1 1321 aa16.86■□□□□ 0.29
CDC42SE1-205ENST00000491825 POTEB3A0JP26 581 aa16.85■□□□□ 0.29
CDC42SE1-205ENST00000491825 WDR64B1ANS9 1081 aa16.85■□□□□ 0.29
CDC42SE1-205ENST00000491825 DDX39AO00148 427 aaKnown RBP16.85■□□□□ 0.29
CDC42SE1-205ENST00000491825 DGKIO75912 1065 aa16.85■□□□□ 0.29
CDC42SE1-205ENST00000491825 BAG4O95429 457 aaKnown RBP16.85■□□□□ 0.29
CDC42SE1-205ENST00000491825 RB1P06400 928 aa16.85■□□□□ 0.29
CDC42SE1-205ENST00000491825 OR52Z1P0C646 297 aa16.85■□□□□ 0.29
CDC42SE1-205ENST00000491825 ATP2B1P20020 1258 aa16.85■□□□□ 0.29
CDC42SE1-205ENST00000491825 CTNNB1P35222 781 aa16.85■□□□□ 0.29
CDC42SE1-205ENST00000491825 BMPR1AP36894 532 aa16.85■□□□□ 0.29
CDC42SE1-205ENST00000491825 JAK3P52333 1124 aa16.85■□□□□ 0.29
CDC42SE1-205ENST00000491825 SPIRE1Q08AE8 756 aa16.85■□□□□ 0.29
CDC42SE1-205ENST00000491825 TMEM62Q0P6H9 643 aa16.85■□□□□ 0.29
CDC42SE1-205ENST00000491825 PKP1Q13835 747 aa16.85■□□□□ 0.29
CDC42SE1-205ENST00000491825 NBR1Q14596 966 aa16.85■□□□□ 0.29
CDC42SE1-205ENST00000491825 ZNF174Q15697 407 aa16.85■□□□□ 0.29
CDC42SE1-205ENST00000491825 TCEAL5Q5H9L2 206 aa16.85■□□□□ 0.29
CDC42SE1-205ENST00000491825 IER5Q5VY09 327 aa16.85■□□□□ 0.29
CDC42SE1-205ENST00000491825 POTEBQ6S5H4 581 aa16.85■□□□□ 0.29
CDC42SE1-205ENST00000491825 MTHFD1LQ6UB35 978 aa16.85■□□□□ 0.29
CDC42SE1-205ENST00000491825 C4orf32Q8N8J7 132 aa16.85■□□□□ 0.29
CDC42SE1-205ENST00000491825 TNPO1Q92973 898 aaKnown RBP16.85■□□□□ 0.29
CDC42SE1-205ENST00000491825 TMEM60Q9H2L4 133 aa16.85■□□□□ 0.29
CDC42SE1-205ENST00000491825 UNC45AQ9H3U1 944 aa16.85■□□□□ 0.29
CDC42SE1-205ENST00000491825 NSUN3Q9H649 340 aaKnown RBP16.85■□□□□ 0.29
CDC42SE1-205ENST00000491825 PADI3Q9ULW8 664 aa16.85■□□□□ 0.29
CDC42SE1-205ENST00000491825 RWDD3Q9Y3V2 267 aa16.85■□□□□ 0.29
CDC42SE1-205ENST00000491825 WDR81Q562E7 1941 aa16.85■□□□□ 0.29
CDC42SE1-205ENST00000491825 ZBTB42B2RXF5 422 aa16.84■□□□□ 0.29
CDC42SE1-205ENST00000491825 BRD1O95696 1058 aa16.84■□□□□ 0.29
CDC42SE1-205ENST00000491825 BMP15O95972 392 aa16.84■□□□□ 0.29
CDC42SE1-205ENST00000491825 F13A1P00488 732 aa16.84■□□□□ 0.29
CDC42SE1-205ENST00000491825 IL9P15248 144 aa16.84■□□□□ 0.29
CDC42SE1-205ENST00000491825 PRPHP41219 470 aa16.84■□□□□ 0.29
CDC42SE1-205ENST00000491825 ATP2C1P98194 919 aaPredicted RBP16.84■□□□□ 0.29
CDC42SE1-205ENST00000491825 MIS18BP1Q6P0N0 1132 aa16.84■□□□□ 0.29
CDC42SE1-205ENST00000491825 FAM178BQ8IXR5 827 aa16.84■□□□□ 0.29
CDC42SE1-205ENST00000491825 ATP8B4Q8TF62 1192 aa16.84■□□□□ 0.29
CDC42SE1-205ENST00000491825 GJA10Q969M2 543 aa16.84■□□□□ 0.29
CDC42SE1-205ENST00000491825 PABPC5Q96DU9 382 aaKnown RBP16.84■□□□□ 0.29
CDC42SE1-205ENST00000491825 C11orf84Q9BUA3 381 aaPredicted RBP16.84■□□□□ 0.29
CDC42SE1-205ENST00000491825 FTHL17Q9BXU8 183 aa16.84■□□□□ 0.29
CDC42SE1-205ENST00000491825 CELF4Q9BZC1 486 aaKnown RBP16.84■□□□□ 0.29
CDC42SE1-205ENST00000491825 TMX1Q9H3N1 280 aa16.84■□□□□ 0.29
CDC42SE1-205ENST00000491825 PCDHA10Q9Y5I2 948 aa16.84■□□□□ 0.29
CDC42SE1-205ENST00000491825 GRM6O15303 877 aa16.83■□□□□ 0.28
CDC42SE1-205ENST00000491825 ATP4AP20648 1035 aa16.83■□□□□ 0.28
CDC42SE1-205ENST00000491825 PTGDRQ13258 359 aa16.83■□□□□ 0.28
CDC42SE1-205ENST00000491825 BTG3Q14201 252 aaPredicted RBP16.83■□□□□ 0.28
CDC42SE1-205ENST00000491825 RALGAPA2Q2PPJ7 1873 aa16.83■□□□□ 0.28
CDC42SE1-205ENST00000491825 UIMC1Q96RL1 719 aa16.83■□□□□ 0.28
CDC42SE1-205ENST00000491825 LMAN2LQ9H0V9 348 aa16.83■□□□□ 0.28
CDC42SE1-205ENST00000491825 TTC12Q9H892 705 aaPredicted RBP16.83■□□□□ 0.28
CDC42SE1-205ENST00000491825 C11orf16Q9NQ32 467 aa16.83■□□□□ 0.28
CDC42SE1-205ENST00000491825 PCDHA12Q9UN75 941 aa16.83■□□□□ 0.28
CDC42SE1-205ENST00000491825 RBM19Q9Y4C8 960 aaKnown RBP16.83■□□□□ 0.28
CDC42SE1-205ENST00000491825 MORC2Q9Y6X9 1032 aaPredicted RBP16.83■□□□□ 0.28
CDC42SE1-205ENST00000491825 TTC3P53804 2025 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms