RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 EML1O00423 815 aa16.94■□□□□ 0.3
USP39-217ENST00000491659 GPR182O15218 404 aa16.94■□□□□ 0.3
USP39-217ENST00000491659 NEMFO60524 1076 aa16.94■□□□□ 0.3
USP39-217ENST00000491659 POU3F3P20264 500 aaPredicted RBP16.94■□□□□ 0.3
USP39-217ENST00000491659 NCAPH2Q6IBW4 605 aa16.94■□□□□ 0.3
USP39-217ENST00000491659 LINC01465Q8N7H1 131 aa16.94■□□□□ 0.3
USP39-217ENST00000491659 FBXO22Q8NEZ5 403 aa16.94■□□□□ 0.3
USP39-217ENST00000491659 HAS1Q92839 578 aa16.94■□□□□ 0.3
USP39-217ENST00000491659 SCLT1Q96NL6 688 aa16.94■□□□□ 0.3
USP39-217ENST00000491659 NIFKQ9BYG3 293 aaKnown RBP16.94■□□□□ 0.3
USP39-217ENST00000491659 TSPYL2Q9H2G4 693 aaPredicted RBP16.94■□□□□ 0.3
USP39-217ENST00000491659 SUGCTQ9HAC7 445 aa16.94■□□□□ 0.3
USP39-217ENST00000491659 ERVK-5Q9HDB9 667 aa16.94■□□□□ 0.3
USP39-217ENST00000491659 NOC2LQ9Y3T9 749 aaKnown RBP16.94■□□□□ 0.3
USP39-217ENST00000491659 MTCH2Q9Y6C9 303 aa16.94■□□□□ 0.3
USP39-217ENST00000491659 KIAA1671Q9BY89 1806 aa16.93■□□□□ 0.3
USP39-217ENST00000491659 DDX11L8A8MPP1 907 aa16.93■□□□□ 0.3
USP39-217ENST00000491659 GPR32O75388 356 aa16.93■□□□□ 0.3
USP39-217ENST00000491659 P4HBP07237 508 aaKnown RBP16.93■□□□□ 0.3
USP39-217ENST00000491659 STAG3L1P0CL83 205 aa16.93■□□□□ 0.3
USP39-217ENST00000491659 QARSP47897 775 aaKnown RBP16.93■□□□□ 0.3
USP39-217ENST00000491659 NLRP11P59045 1033 aaKnown RBP16.93■□□□□ 0.3
USP39-217ENST00000491659 GNL2Q13823 731 aaKnown RBP16.93■□□□□ 0.3
USP39-217ENST00000491659 TARBP2Q15633 366 aaKnown RBP16.93■□□□□ 0.3
USP39-217ENST00000491659 CALCRLQ16602 461 aa16.93■□□□□ 0.3
USP39-217ENST00000491659 NPAS4Q8IUM7 802 aa16.93■□□□□ 0.3
USP39-217ENST00000491659 FIBCD1Q8N539 461 aa16.93■□□□□ 0.3
USP39-217ENST00000491659 IL27Q8NEV9 243 aa16.93■□□□□ 0.3
USP39-217ENST00000491659 TMEM40Q8WWA1 233 aa16.93■□□□□ 0.3
USP39-217ENST00000491659 C17orf80Q9BSJ5 609 aa16.93■□□□□ 0.3
USP39-217ENST00000491659 CDHR5Q9HBB8 845 aa16.93■□□□□ 0.3
USP39-217ENST00000491659 TRANK1O15050 2925 aa16.93■□□□□ 0.3
USP39-217ENST00000491659 DENND3A2RUS2 1198 aa16.92■□□□□ 0.3
USP39-217ENST00000491659 TMEM150BA6NC51 233 aa16.92■□□□□ 0.3
USP39-217ENST00000491659 LPXNO60711 386 aa16.92■□□□□ 0.3
USP39-217ENST00000491659 DNM2P50570 870 aa16.92■□□□□ 0.3
USP39-217ENST00000491659 EPHA7Q15375 998 aa16.92■□□□□ 0.3
USP39-217ENST00000491659 JPH2Q9BR39 696 aaPredicted RBP16.92■□□□□ 0.3
USP39-217ENST00000491659 LXNQ9BS40 222 aa16.92■□□□□ 0.3
USP39-217ENST00000491659 TMX1Q9H3N1 280 aa16.92■□□□□ 0.3
USP39-217ENST00000491659 C1orf112Q9NSG2 853 aa16.92■□□□□ 0.3
USP39-217ENST00000491659 RNF216Q9NWF9 866 aaPredicted RBP16.92■□□□□ 0.3
USP39-217ENST00000491659 LMCD1Q9NZU5 365 aa16.92■□□□□ 0.3
USP39-217ENST00000491659 THEGQ9P2T0 379 aa16.92■□□□□ 0.3
USP39-217ENST00000491659 LRFN2Q9ULH4 789 aa16.92■□□□□ 0.3
USP39-217ENST00000491659 ST3GAL5Q9UNP4 418 aa16.92■□□□□ 0.3
USP39-217ENST00000491659 RWDD3Q9Y3V2 267 aa16.92■□□□□ 0.3
USP39-217ENST00000491659 EYSQ5T1H1 3165 aa16.91■□□□□ 0.3
USP39-217ENST00000491659 STBD1O95210 358 aa16.91■□□□□ 0.3
USP39-217ENST00000491659 IBSPP21815 317 aaPredicted RBP16.91■□□□□ 0.3
USP39-217ENST00000491659 SARSP49591 514 aaKnown RBP16.91■□□□□ 0.3
USP39-217ENST00000491659 GPC3P51654 580 aa16.91■□□□□ 0.3
USP39-217ENST00000491659 BTG3Q14201 252 aaPredicted RBP16.91■□□□□ 0.3
USP39-217ENST00000491659 SKIV2LQ15477 1246 aaKnown RBP16.91■□□□□ 0.3
USP39-217ENST00000491659 EPC2Q52LR7 807 aa16.91■□□□□ 0.3
USP39-217ENST00000491659 PLA2G4FQ68DD2 849 aa16.91■□□□□ 0.3
USP39-217ENST00000491659 ANO5Q75V66 913 aa16.91■□□□□ 0.3
USP39-217ENST00000491659 RTN4RL1Q86UN2 441 aaPredicted RBP16.91■□□□□ 0.3
USP39-217ENST00000491659 FAM228AQ86W67 206 aa16.91■□□□□ 0.3
USP39-217ENST00000491659 TMEM192Q8IY95 271 aa16.91■□□□□ 0.3
USP39-217ENST00000491659 FBXO18Q8NFZ0 1043 aa16.91■□□□□ 0.3
USP39-217ENST00000491659 SH2D3AQ9BRG2 576 aa16.91■□□□□ 0.3
USP39-217ENST00000491659 FOXP1Q9H334 677 aaPredicted RBP16.91■□□□□ 0.3
USP39-217ENST00000491659 RC3H2Q9HBD1 1191 aaKnown RBP16.91■□□□□ 0.3
USP39-217ENST00000491659 CYP26B1Q9NR63 512 aa16.91■□□□□ 0.3
USP39-217ENST00000491659 PCDHA12Q9UN75 941 aa16.91■□□□□ 0.3
USP39-217ENST00000491659 KIF3AQ9Y496 699 aa16.91■□□□□ 0.3
USP39-217ENST00000491659 PPME1Q9Y570 386 aa16.91■□□□□ 0.3
USP39-217ENST00000491659 PRRC2BQ5JSZ5 2229 aaKnown RBP16.9■□□□□ 0.3
USP39-217ENST00000491659 DLL1O00548 723 aa16.9■□□□□ 0.3
USP39-217ENST00000491659 MAFO75444 373 aaPredicted RBP16.9■□□□□ 0.3
USP39-217ENST00000491659 DGKIO75912 1065 aa16.9■□□□□ 0.3
USP39-217ENST00000491659 ATP2B1P20020 1258 aa16.9■□□□□ 0.3
USP39-217ENST00000491659 CTNNB1P35222 781 aa16.9■□□□□ 0.3
USP39-217ENST00000491659 CDC42EP1Q00587 391 aa16.9■□□□□ 0.3
USP39-217ENST00000491659 SPIRE1Q08AE8 756 aa16.9■□□□□ 0.3
USP39-217ENST00000491659 C4orf19Q8IY42 314 aa16.9■□□□□ 0.3
USP39-217ENST00000491659 EXOC8Q8IYI6 725 aa16.9■□□□□ 0.3
USP39-217ENST00000491659 NEK9Q8TD19 979 aa16.9■□□□□ 0.3
USP39-217ENST00000491659 NLRP7Q8WX94 980 aa16.9■□□□□ 0.3
USP39-217ENST00000491659 DYDC2Q96IM9 177 aa16.9■□□□□ 0.3
USP39-217ENST00000491659 ADAM2Q99965 735 aa16.9■□□□□ 0.3
USP39-217ENST00000491659 ADAMTS10Q9H324 1103 aa16.9■□□□□ 0.3
USP39-217ENST00000491659 ZSWIM4Q9H7M6 989 aa16.9■□□□□ 0.3
USP39-217ENST00000491659 TTC12Q9H892 705 aaPredicted RBP16.9■□□□□ 0.3
USP39-217ENST00000491659 PRDM6Q9NQX0 595 aa16.9■□□□□ 0.3
USP39-217ENST00000491659 FNDC1Q4ZHG4 1894 aaPredicted RBP16.9■□□□□ 0.3
USP39-217ENST00000491659 IGKV6-21A0A0C4DH24 114 aa16.89■□□□□ 0.29
USP39-217ENST00000491659 WNT7AO00755 349 aa16.89■□□□□ 0.29
USP39-217ENST00000491659 MGEA5O60502 916 aa16.89■□□□□ 0.29
USP39-217ENST00000491659 EIF4BP23588 611 aaKnown RBP16.89■□□□□ 0.29
USP39-217ENST00000491659 YWHABP31946 246 aaKnown RBP16.89■□□□□ 0.29
USP39-217ENST00000491659 MCM7P33993 719 aa16.89■□□□□ 0.29
USP39-217ENST00000491659 TXKP42681 527 aa16.89■□□□□ 0.29
USP39-217ENST00000491659 POLGP54098 1239 aaPredicted RBP16.89■□□□□ 0.29
USP39-217ENST00000491659 CYP4A11Q02928 519 aa16.89■□□□□ 0.29
USP39-217ENST00000491659 PTPROQ16827 1216 aa16.89■□□□□ 0.29
USP39-217ENST00000491659 OTUD6AQ7L8S5 288 aa16.89■□□□□ 0.29
USP39-217ENST00000491659 CMTR2Q8IYT2 770 aaKnown RBP16.89■□□□□ 0.29
USP39-217ENST00000491659 SLC7A3Q8WY07 619 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms