RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, human

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF2-208	ENST00000491541	FAM192A	Q9GZU8	254 aa		11.2	□□□□□ -0.62
SREBF2-208	ENST00000491541	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.2	□□□□□ -0.62
SREBF2-208	ENST00000491541	SYNPO2	Q9UMS6	1093 aa		11.2	□□□□□ -0.62
SREBF2-208	ENST00000491541	KCNJ14	Q9UNX9	436 aa		11.2	□□□□□ -0.62
SREBF2-208	ENST00000491541	STARD13	Q9Y3M8	1113 aa		11.2	□□□□□ -0.62
SREBF2-208	ENST00000491541	HEXIM1	O94992	359 aa	Known RBP	11.2	□□□□□ -0.62
SREBF2-208	ENST00000491541	TMEM253	P0C7T8	217 aa		11.2	□□□□□ -0.62
SREBF2-208	ENST00000491541	CYP19A1	P11511	503 aa	Predicted RBP	11.2	□□□□□ -0.62
SREBF2-208	ENST00000491541	ATP6V1C1	P21283	382 aa		11.2	□□□□□ -0.62
SREBF2-208	ENST00000491541	ITGA6	P23229	1130 aa		11.2	□□□□□ -0.62
SREBF2-208	ENST00000491541	EIF4A3	P38919	411 aa	Known RBP	11.2	□□□□□ -0.62
SREBF2-208	ENST00000491541	TRAF1	Q13077	416 aa		11.2	□□□□□ -0.62
SREBF2-208	ENST00000491541	SLC9A9	Q8IVB4	645 aa		11.2	□□□□□ -0.62
SREBF2-208	ENST00000491541	NELFCD	Q8IXH7	590 aa		11.2	□□□□□ -0.62
SREBF2-208	ENST00000491541	GATA6	Q92908	595 aa		11.2	□□□□□ -0.62
SREBF2-208	ENST00000491541	EEF2KMT	Q96G04	330 aa		11.2	□□□□□ -0.62
SREBF2-208	ENST00000491541	DEFB129	Q9H1M3	183 aa		11.2	□□□□□ -0.62
SREBF2-208	ENST00000491541	UBN1	Q9NPG3	1134 aa		11.2	□□□□□ -0.62
SREBF2-208	ENST00000491541	STK32B	Q9NY57	414 aa		11.2	□□□□□ -0.62
SREBF2-208	ENST00000491541	BAIAP2L1	Q9UHR4	511 aa		11.2	□□□□□ -0.62
SREBF2-208	ENST00000491541		B4DLN1	442 aa		11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	PTPN7	P35236	360 aa		11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	EPHA7	Q15375	998 aa		11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	CHRNA2	Q15822	529 aa		11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	C12orf56	Q8IXR9	622 aa		11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	ASAP3	Q8TDY4	903 aa		11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	HVCN1	Q96D96	273 aa		11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	DMAC2	Q9NW81	257 aa		11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	LRRC53	A6NM62	1247 aa		11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	COQ9	O75208	318 aa		11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	CALB2	P22676	271 aa		11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	PEX5	P50542	639 aa		11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	MAP2K1	Q02750	393 aa	Predicted RBP	11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	CCDC96	Q2M329	555 aa		11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	NUP133	Q8WUM0	1156 aa		11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	DTNBP1	Q96EV8	351 aa		11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	IVD	P26440	423 aa		11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	GUCY2F	P51841	1108 aa		11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	CCDC152	Q4G0S7	254 aa		11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	TRMT10C	Q7L0Y3	403 aa	Known RBP	11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	CACNA2D3	Q8IZS8	1091 aa		11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	LMBR1	Q8WVP7	490 aa		11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	LRRC19	Q9H756	370 aa		11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	11.19	□□□□□ -0.62	5e-6	■■■■□ 26.4
SREBF2-208	ENST00000491541	AGAP1	Q9UPQ3	857 aa		11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	TRIM64B	A6NI03	449 aa		11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	ZPR1	O75312	459 aa		11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	CXCR5	P32302	372 aa		11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	STK4	Q13043	487 aa		11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	HLTF	Q14527	1009 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	MKNK1	Q9BUB5	465 aa		11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	TMX4	Q9H1E5	349 aa	Predicted RBP	11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	SEC63	Q9UGP8	760 aa	Known RBP	11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
SREBF2-208	ENST00000491541	DOCK1	Q14185	1865 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	MOCS3	O95396	460 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	MYZAP	P0CAP1	466 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	RARG	P13631	454 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	ADSS	P30520	456 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	SEC24C	P53992	1094 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	RNASE9	P60153	205 aa	Known RBP	11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	GKAP1	Q5VSY0	366 aa	Predicted RBP	11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	NUGGC	Q68CJ6	796 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	VSTM1	Q6UX27	236 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	RAD54L	Q92698	747 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	FAM163A	Q96GL9	167 aa	Predicted RBP	11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	MLXIP	Q9HAP2	919 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	ADAM22	Q9P0K1	906 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	WDR35	Q9P2L0	1181 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	RALGAPA2	Q2PPJ7	1873 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	PLEK	P08567	350 aa	Predicted RBP	11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	GSTA2	P09210	222 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	PAFAH1B1	P43034	410 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	GNAQ	P50148	359 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	UBE4A	Q14139	1066 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	TYW1B	Q6NUM6	668 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	TRPM8	Q7Z2W7	1104 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	LRRC43	Q8N309	656 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	WHRN	Q9P202	907 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	ANKFY1	Q9P2R3	1169 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	CIDEB	Q9UHD4	219 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	LCT	P09848	1927 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	COL11A2	P13942	1736 aa	Predicted RBP	11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	ZMYM2	Q9UBW7	1377 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	TRIM49B	A6NDI0	452 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	BACH1	O14867	736 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	TSHR	P16473	764 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	TRIM21	P19474	475 aa	Known RBP	11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	GHRHR	Q02643	423 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	SPIRE1	Q08AE8	756 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	C6orf118	Q5T5N4	469 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	RBM12B	Q8IXT5	1001 aa	Known RBP	11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	SYCE1	Q8N0S2	351 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	MICAL1	Q8TDZ2	1067 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	SAR1A	Q9NR31	198 aa		11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	NOP53	Q9NZM5	478 aa	Known RBP	11.18	□□□□□ -0.62
SREBF2-208	ENST00000491541	ADAMTS2	O95450	1211 aa		11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	NTSR2	O95665	410 aa		11.17	□□□□□ -0.62

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