RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 PPME1Q9Y570 386 aa18.61■□□□□ 0.57
PDLIM2-217ENST00000491330 PCDHB12Q9Y5F1 795 aa18.61■□□□□ 0.57
PDLIM2-217ENST00000491330 MYO9BQ13459 2157 aa18.61■□□□□ 0.57
PDLIM2-217ENST00000491330 M0R2N6 131 aa18.6■□□□□ 0.57
PDLIM2-217ENST00000491330 ADAMTS3O15072 1205 aa18.6■□□□□ 0.57
PDLIM2-217ENST00000491330 EIF4BP23588 611 aaKnown RBP18.6■□□□□ 0.57
PDLIM2-217ENST00000491330 CLCN3P51790 818 aa18.6■□□□□ 0.57
PDLIM2-217ENST00000491330 TMEM266Q2M3C6 531 aa18.6■□□□□ 0.57
PDLIM2-217ENST00000491330 SLC7A3Q8WY07 619 aa18.6■□□□□ 0.57
PDLIM2-217ENST00000491330 P2RX5Q93086 422 aa18.6■□□□□ 0.57
PDLIM2-217ENST00000491330 AIFM3Q96NN9 605 aa18.6■□□□□ 0.57
PDLIM2-217ENST00000491330 UPF2Q9HAU5 1272 aaKnown RBP18.6■□□□□ 0.57
PDLIM2-217ENST00000491330 ERVK-5Q9HDB9 667 aa18.6■□□□□ 0.57
PDLIM2-217ENST00000491330 RGS18Q9NS28 235 aa18.6■□□□□ 0.57
PDLIM2-217ENST00000491330 DACT1Q9NYF0 836 aa18.6■□□□□ 0.57
PDLIM2-217ENST00000491330 DOCK5Q9H7D0 1870 aa18.6■□□□□ 0.57
PDLIM2-217ENST00000491330 GBF1Q92538 1859 aa18.59■□□□□ 0.57
PDLIM2-217ENST00000491330 ZBTB42B2RXF5 422 aa18.59■□□□□ 0.57
PDLIM2-217ENST00000491330 QARSP47897 775 aaKnown RBP18.59■□□□□ 0.57
PDLIM2-217ENST00000491330 TFF2Q03403 129 aa18.59■□□□□ 0.57
PDLIM2-217ENST00000491330 MTERF2Q49AM1 385 aa18.59■□□□□ 0.57
PDLIM2-217ENST00000491330 SPRED2Q7Z698 418 aa18.59■□□□□ 0.57
PDLIM2-217ENST00000491330 CLP1Q92989 425 aaKnown RBP18.59■□□□□ 0.57
PDLIM2-217ENST00000491330 GTF3C6Q969F1 213 aa18.59■□□□□ 0.57
PDLIM2-217ENST00000491330 ZNF689Q96CS4 500 aaPredicted RBP18.59■□□□□ 0.57
PDLIM2-217ENST00000491330 CCDC43Q96MW1 224 aaKnown RBP18.59■□□□□ 0.57
PDLIM2-217ENST00000491330 MBOAT7Q96N66 472 aa18.59■□□□□ 0.57
PDLIM2-217ENST00000491330 PPP1R16BQ96T49 567 aa18.59■□□□□ 0.57
PDLIM2-217ENST00000491330 NIFKQ9BYG3 293 aaKnown RBP18.59■□□□□ 0.57
PDLIM2-217ENST00000491330 ELAC1Q9H777 363 aaKnown RBP18.59■□□□□ 0.57
PDLIM2-217ENST00000491330 UBE2ZQ9H832 354 aaPredicted RBP18.59■□□□□ 0.57
PDLIM2-217ENST00000491330 TMEM161AQ9NX61 479 aa18.59■□□□□ 0.57
PDLIM2-217ENST00000491330 P4HBP07237 508 aaKnown RBP18.58■□□□□ 0.56
PDLIM2-217ENST00000491330 SKIP12755 728 aa18.58■□□□□ 0.56
PDLIM2-217ENST00000491330 SFPQP23246 707 aaKnown RBP eCLIP18.58■□□□□ 0.56
PDLIM2-217ENST00000491330 GNL2Q13823 731 aaKnown RBP18.58■□□□□ 0.56
PDLIM2-217ENST00000491330 C8orf34Q49A92 452 aa18.58■□□□□ 0.56
PDLIM2-217ENST00000491330 LRRC71Q8N4P6 559 aa18.58■□□□□ 0.56
PDLIM2-217ENST00000491330 ETNPPLQ8TBG4 499 aa18.58■□□□□ 0.56
PDLIM2-217ENST00000491330 RSPH1Q8WYR4 309 aa18.58■□□□□ 0.56
PDLIM2-217ENST00000491330 ZSCAN31Q96LW9 406 aaPredicted RBP18.58■□□□□ 0.56
PDLIM2-217ENST00000491330 PUF60Q9UHX1 559 aaKnown RBP18.58■□□□□ 0.56
PDLIM2-217ENST00000491330 LIMCH1Q9UPQ0 1083 aa18.58■□□□□ 0.56
PDLIM2-217ENST00000491330 CARNS1A5YM72 827 aa18.57■□□□□ 0.56
PDLIM2-217ENST00000491330 ZNF862O60290 1169 aa18.57■□□□□ 0.56
PDLIM2-217ENST00000491330 GPR32O75388 356 aa18.57■□□□□ 0.56
PDLIM2-217ENST00000491330 BMP1P13497 986 aa18.57■□□□□ 0.56
PDLIM2-217ENST00000491330 PPP2R5CQ13362 524 aa18.57■□□□□ 0.56
PDLIM2-217ENST00000491330 BMS1Q14692 1282 aaKnown RBP18.57■□□□□ 0.56
PDLIM2-217ENST00000491330 PAN2Q504Q3 1202 aaKnown RBP18.57■□□□□ 0.56
PDLIM2-217ENST00000491330 RTN4RL1Q86UN2 441 aaPredicted RBP18.57■□□□□ 0.56
PDLIM2-217ENST00000491330 NECAB1Q8N987 351 aa18.57■□□□□ 0.56
PDLIM2-217ENST00000491330 CDHR5Q9HBB8 845 aa18.57■□□□□ 0.56
PDLIM2-217ENST00000491330 FSD2A1L4K1 749 aa18.56■□□□□ 0.56
PDLIM2-217ENST00000491330 TBKBP1A7MCY6 615 aa18.56■□□□□ 0.56
PDLIM2-217ENST00000491330 GAS2O43903 313 aaKnown RBP18.56■□□□□ 0.56
PDLIM2-217ENST00000491330 KCNA5P22460 613 aa18.56■□□□□ 0.56
PDLIM2-217ENST00000491330 RBM25P49756 843 aaKnown RBP18.56■□□□□ 0.56
PDLIM2-217ENST00000491330 POLGP54098 1239 aaPredicted RBP18.56■□□□□ 0.56
PDLIM2-217ENST00000491330 NCBP1Q09161 790 aaKnown RBP18.56■□□□□ 0.56
PDLIM2-217ENST00000491330 EPHA7Q15375 998 aa18.56■□□□□ 0.56
PDLIM2-217ENST00000491330 ME3Q16798 604 aa18.56■□□□□ 0.56
PDLIM2-217ENST00000491330 ZNF410Q86VK4 478 aa18.56■□□□□ 0.56
PDLIM2-217ENST00000491330 FAM184AQ8NB25 1140 aa18.56■□□□□ 0.56
PDLIM2-217ENST00000491330 MICAL1Q8TDZ2 1067 aa18.56■□□□□ 0.56
PDLIM2-217ENST00000491330 CEP170P1Q96L14 293 aa18.56■□□□□ 0.56
PDLIM2-217ENST00000491330 ZSWIM4Q9H7M6 989 aa18.56■□□□□ 0.56
PDLIM2-217ENST00000491330 CHST12Q9NRB3 414 aa18.56■□□□□ 0.56
PDLIM2-217ENST00000491330 SUCLA2Q9P2R7 463 aaPredicted RBP18.56■□□□□ 0.56
PDLIM2-217ENST00000491330 PCDHA12Q9UN75 941 aa18.56■□□□□ 0.56
PDLIM2-217ENST00000491330 COL4A6Q14031 1691 aa18.55■□□□□ 0.56
PDLIM2-217ENST00000491330 DARSP14868 501 aaKnown RBP18.55■□□□□ 0.56
PDLIM2-217ENST00000491330 RFC5P40937 340 aa18.55■□□□□ 0.56
PDLIM2-217ENST00000491330 GPC3P51654 580 aa18.55■□□□□ 0.56
PDLIM2-217ENST00000491330 KCNQ1P51787 676 aa18.55■□□□□ 0.56
PDLIM2-217ENST00000491330 UBE3AQ05086 875 aa18.55■□□□□ 0.56
PDLIM2-217ENST00000491330 NPY5RQ15761 445 aa18.55■□□□□ 0.56
PDLIM2-217ENST00000491330 CALCRLQ16602 461 aa18.55■□□□□ 0.56
PDLIM2-217ENST00000491330 LEXMQ3ZCV2 418 aa18.55■□□□□ 0.56
PDLIM2-217ENST00000491330 NCAPH2Q6IBW4 605 aa18.55■□□□□ 0.56
PDLIM2-217ENST00000491330 FAM228AQ86W67 206 aa18.55■□□□□ 0.56
PDLIM2-217ENST00000491330 TMEM40Q8WWA1 233 aa18.55■□□□□ 0.56
PDLIM2-217ENST00000491330 TCP11Q8WWU5 503 aa18.55■□□□□ 0.56
PDLIM2-217ENST00000491330 LINC01599Q8WXQ3 324 aa18.55■□□□□ 0.56
PDLIM2-217ENST00000491330 PABPC5Q96DU9 382 aaKnown RBP18.55■□□□□ 0.56
PDLIM2-217ENST00000491330 LLPHQ9BRT6 129 aaKnown RBP18.55■□□□□ 0.56
PDLIM2-217ENST00000491330 TMX1Q9H3N1 280 aa18.55■□□□□ 0.56
PDLIM2-217ENST00000491330 KCNMB3Q9NPA1 279 aa18.55■□□□□ 0.56
PDLIM2-217ENST00000491330 PLAGL2Q9UPG8 496 aa18.55■□□□□ 0.56
PDLIM2-217ENST00000491330 KIF3AQ9Y496 699 aa18.55■□□□□ 0.56
PDLIM2-217ENST00000491330 MRPL42Q9Y6G3 142 aaKnown RBP18.55■□□□□ 0.56
PDLIM2-217ENST00000491330 COL6A3P12111 3177 aa18.55■□□□□ 0.56
PDLIM2-217ENST00000491330 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.54■□□□□ 0.56
PDLIM2-217ENST00000491330 C9IYK1 514 aa18.54■□□□□ 0.56
PDLIM2-217ENST00000491330 SLC37A4O43826 429 aa18.54■□□□□ 0.56
PDLIM2-217ENST00000491330 SEC24BO95487 1268 aa18.54■□□□□ 0.56
PDLIM2-217ENST00000491330 EOMESO95936 686 aa18.54■□□□□ 0.56
PDLIM2-217ENST00000491330 MMP1P03956 469 aa18.54■□□□□ 0.56
PDLIM2-217ENST00000491330 LAG3P18627 525 aa18.54■□□□□ 0.56
PDLIM2-217ENST00000491330 HMGN5P82970 282 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms