RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 B3GNT9Q6UX72 402 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 CNGA4Q8IV77 575 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 C4orf19Q8IY42 314 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 KIAA1524Q8TCG1 905 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 SH3TC2Q8TF17 1288 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 LRRC15Q8TF66 581 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 ATP6V0A1Q93050 837 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 CCDC51Q96ER9 411 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 ZNF830Q96NB3 372 aaPredicted RBP11.33□□□□□ -0.6
HDAC3-210ENST00000490808 NAP1L5Q96NT1 182 aaPredicted RBP11.33□□□□□ -0.6
HDAC3-210ENST00000490808 INPP4AQ96PE3 977 aaPredicted RBP11.33□□□□□ -0.6
HDAC3-210ENST00000490808 UIMC1Q96RL1 719 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 LXNQ9BS40 222 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.33□□□□□ -0.6
HDAC3-210ENST00000490808 RNF208Q9H0X6 261 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 SPC25Q9HBM1 224 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 OLFML3Q9NRN5 406 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 ANKEF1Q9NU02 776 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.33□□□□□ -0.6
HDAC3-210ENST00000490808 LARSQ9P2J5 1176 aaKnown RBP11.33□□□□□ -0.6
HDAC3-210ENST00000490808 FAM184BQ9ULE4 1060 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 PCDHA10Q9Y5I2 948 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 UBE4BO95155 1302 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 LRRC37A2A6NM11 1700 aa11.32□□□□□ -0.6
HDAC3-210ENST00000490808 A0A1W2PQC6 194 aa11.32□□□□□ -0.6
HDAC3-210ENST00000490808 RBM47A0AV96 593 aaKnown RBP11.32□□□□□ -0.6
HDAC3-210ENST00000490808 SOWAHBA6NEL2 793 aa11.32□□□□□ -0.6
HDAC3-210ENST00000490808 AKR1B15C9JRZ8 316 aaPredicted RBP11.32□□□□□ -0.6
HDAC3-210ENST00000490808 PES1O00541 588 aaKnown RBP11.32□□□□□ -0.6
HDAC3-210ENST00000490808 EIF3DO15371 548 aaKnown RBP eCLIP11.32□□□□□ -0.6
HDAC3-210ENST00000490808 GUCY2CP25092 1073 aa11.32□□□□□ -0.6
HDAC3-210ENST00000490808 GJA8P48165 433 aa11.32□□□□□ -0.6
HDAC3-210ENST00000490808 CNTN2Q02246 1040 aa11.32□□□□□ -0.6
HDAC3-210ENST00000490808 PPP2R3AQ06190 1150 aa11.32□□□□□ -0.6
HDAC3-210ENST00000490808 NOLC1Q14978 699 aaKnown RBP eCLIP11.32□□□□□ -0.6
HDAC3-210ENST00000490808 KRT31Q15323 416 aa11.32□□□□□ -0.6
HDAC3-210ENST00000490808 CCL14Q16627 93 aa11.32□□□□□ -0.6
HDAC3-210ENST00000490808 HSP90AA4PQ58FG1 418 aa11.32□□□□□ -0.6
HDAC3-210ENST00000490808 MIS18BP1Q6P0N0 1132 aa11.32□□□□□ -0.6
HDAC3-210ENST00000490808 MYCT1Q8N699 235 aa11.32□□□□□ -0.6
HDAC3-210ENST00000490808 RETREG2Q8NC44 543 aa11.32□□□□□ -0.6
HDAC3-210ENST00000490808 ARRDC4Q8NCT1 418 aa11.32□□□□□ -0.6
HDAC3-210ENST00000490808 KIAA0895Q8NCT3 520 aa11.32□□□□□ -0.6
HDAC3-210ENST00000490808 SCFD2Q8WU76 684 aa11.32□□□□□ -0.6
HDAC3-210ENST00000490808 CACTINQ8WUQ7 758 aaKnown RBP11.32□□□□□ -0.6
HDAC3-210ENST00000490808 FGD4Q96M96 766 aa11.32□□□□□ -0.6
HDAC3-210ENST00000490808 TUBGCP2Q9BSJ2 902 aa11.32□□□□□ -0.6
HDAC3-210ENST00000490808 SEZ6LQ9BYH1 1024 aa11.32□□□□□ -0.6
HDAC3-210ENST00000490808 MRPL44Q9H9J2 332 aaKnown RBP11.32□□□□□ -0.6
HDAC3-210ENST00000490808 PARVGQ9HBI0 331 aa11.32□□□□□ -0.6
HDAC3-210ENST00000490808 RGL1Q9NZL6 768 aa11.32□□□□□ -0.6
HDAC3-210ENST00000490808 FLRT1Q9NZU1 646 aa11.32□□□□□ -0.6
HDAC3-210ENST00000490808 DDX20Q9UHI6 824 aaKnown RBP11.32□□□□□ -0.6
HDAC3-210ENST00000490808 PCDHB13Q9Y5F0 798 aa11.32□□□□□ -0.6
HDAC3-210ENST00000490808 TRIM49BA6NDI0 452 aa11.31□□□□□ -0.6
HDAC3-210ENST00000490808 KIF2AO00139 706 aaPredicted RBP11.31□□□□□ -0.6
HDAC3-210ENST00000490808 DDX39AO00148 427 aaKnown RBP11.31□□□□□ -0.6
HDAC3-210ENST00000490808 PDXKO00764 312 aa11.31□□□□□ -0.6
HDAC3-210ENST00000490808 CETN3O15182 167 aa11.31□□□□□ -0.6
HDAC3-210ENST00000490808 DHX15O43143 795 aaKnown RBP11.31□□□□□ -0.6
HDAC3-210ENST00000490808 STX10O60499 249 aa11.31□□□□□ -0.6
HDAC3-210ENST00000490808 DUSP11O75319 330 aaKnown RBP11.31□□□□□ -0.6
HDAC3-210ENST00000490808 ECM2O94769 699 aaPredicted RBP11.31□□□□□ -0.6
HDAC3-210ENST00000490808 SGPL1O95470 568 aa11.31□□□□□ -0.6
HDAC3-210ENST00000490808 SNAI1O95863 264 aaPredicted RBP11.31□□□□□ -0.6
HDAC3-210ENST00000490808 ZNF865P0CJ78 1059 aaPredicted RBP11.31□□□□□ -0.6
HDAC3-210ENST00000490808 MAPTP10636 758 aaKnown RBP11.31□□□□□ -0.6
HDAC3-210ENST00000490808 RARBP10826 455 aa11.31□□□□□ -0.6
HDAC3-210ENST00000490808 ICAM3P32942 547 aa11.31□□□□□ -0.6
HDAC3-210ENST00000490808 CYP2C19P33261 490 aa11.31□□□□□ -0.6
HDAC3-210ENST00000490808 PSMC6P62333 389 aa11.31□□□□□ -0.6
HDAC3-210ENST00000490808 NKX3-2P78367 333 aa11.31□□□□□ -0.6
HDAC3-210ENST00000490808 UBXN1Q04323 297 aa11.31□□□□□ -0.6
HDAC3-210ENST00000490808 NEDD9Q14511 834 aa11.31□□□□□ -0.6
HDAC3-210ENST00000490808 TTLL4Q14679 1199 aa11.31□□□□□ -0.6
HDAC3-210ENST00000490808 CCDC144BQ3MJ40 725 aa11.31□□□□□ -0.6
HDAC3-210ENST00000490808 CCDC40Q4G0X9 1142 aa11.31□□□□□ -0.6
HDAC3-210ENST00000490808 BRDTQ58F21 947 aaPredicted RBP11.31□□□□□ -0.6
HDAC3-210ENST00000490808 ARSHQ5FYA8 562 aa11.31□□□□□ -0.6
HDAC3-210ENST00000490808 C1orf186Q6ZWK4 172 aa11.31□□□□□ -0.6
HDAC3-210ENST00000490808 ZNF397Q8NF99 534 aaPredicted RBP11.31□□□□□ -0.6
HDAC3-210ENST00000490808 IL31RAQ8NI17 732 aa11.31□□□□□ -0.6
HDAC3-210ENST00000490808 GOLGA5Q8TBA6 731 aa11.31□□□□□ -0.6
HDAC3-210ENST00000490808 DRC1Q96MC2 740 aa11.31□□□□□ -0.6
HDAC3-210ENST00000490808 MED15Q96RN5 788 aa11.31□□□□□ -0.6
HDAC3-210ENST00000490808 DUSP9Q99956 384 aaKnown RBP11.31□□□□□ -0.6
HDAC3-210ENST00000490808 REEP2Q9BRK0 252 aa11.31□□□□□ -0.6
HDAC3-210ENST00000490808 NOC4LQ9BVI4 516 aaKnown RBP11.31□□□□□ -0.6
HDAC3-210ENST00000490808 CRISPLD2Q9H0B8 497 aa11.31□□□□□ -0.6
HDAC3-210ENST00000490808 VPS16Q9H269 839 aa11.31□□□□□ -0.6
HDAC3-210ENST00000490808 RRAGDQ9NQL2 400 aaPredicted RBP11.31□□□□□ -0.6
HDAC3-210ENST00000490808 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.31□□□□□ -0.6
HDAC3-210ENST00000490808 SLC9A2Q9UBY0 812 aa11.31□□□□□ -0.6
HDAC3-210ENST00000490808 MYH11P35749 1972 aa11.3□□□□□ -0.6
HDAC3-210ENST00000490808 LGALS16A8MUM7 142 aa11.3□□□□□ -0.6
HDAC3-210ENST00000490808 SPATA31C2B4DYI2 1134 aa11.3□□□□□ -0.6
HDAC3-210ENST00000490808 ARHGAP6O43182 974 aa11.3□□□□□ -0.6
HDAC3-210ENST00000490808 SCP2P22307 547 aa11.3□□□□□ -0.6
HDAC3-210ENST00000490808 TBC1D8BQ0IIM8 1120 aa11.3□□□□□ -0.6
HDAC3-210ENST00000490808 TBX2Q13207 712 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms