RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	CEP170P1	Q96L14	293 aa		20.78	■□□□□ 0.92
C4A-256	ENST00000490663	OSMR	Q99650	979 aa		20.78	■□□□□ 0.92
C4A-256	ENST00000490663	HSD17B14	Q9BPX1	270 aa		20.78	■□□□□ 0.92
C4A-256	ENST00000490663	CELF4	Q9BZC1	486 aa	Known RBP	20.78	■□□□□ 0.92
C4A-256	ENST00000490663	ZSWIM4	Q9H7M6	989 aa		20.78	■□□□□ 0.92
C4A-256	ENST00000490663	CYP26B1	Q9NR63	512 aa		20.78	■□□□□ 0.92
C4A-256	ENST00000490663	PARN	O95453	639 aa	Known RBP	20.77	■□□□□ 0.92
C4A-256	ENST00000490663	MYOG	P15173	224 aa		20.77	■□□□□ 0.92
C4A-256	ENST00000490663	FXR2	P51116	673 aa	Known RBP eCLIP	20.77	■□□□□ 0.92
C4A-256	ENST00000490663	ATP2C1	P98194	919 aa	Predicted RBP	20.77	■□□□□ 0.92
C4A-256	ENST00000490663	PKP1	Q13835	747 aa		20.77	■□□□□ 0.92
C4A-256	ENST00000490663	ECM1	Q16610	540 aa		20.77	■□□□□ 0.92
C4A-256	ENST00000490663	IER5	Q5VY09	327 aa		20.77	■□□□□ 0.92
C4A-256	ENST00000490663	FAM117B	Q6P1L5	589 aa		20.77	■□□□□ 0.92
C4A-256	ENST00000490663	CATSPER3	Q86XQ3	398 aa		20.77	■□□□□ 0.92
C4A-256	ENST00000490663	TMEM40	Q8WWA1	233 aa		20.77	■□□□□ 0.92
C4A-256	ENST00000490663	IFIH1	Q9BYX4	1025 aa	Known RBP	20.77	■□□□□ 0.92
C4A-256	ENST00000490663	MTIF3	Q9H2K0	278 aa	Known RBP	20.77	■□□□□ 0.92
C4A-256	ENST00000490663	CLIC4	Q9Y696	253 aa		20.77	■□□□□ 0.92
C4A-256	ENST00000490663	MAGEB2	O15479	319 aa		20.76	■□□□□ 0.91
C4A-256	ENST00000490663	DKC1	O60832	514 aa	Known RBP eCLIP	20.76	■□□□□ 0.91
C4A-256	ENST00000490663	CCT6A	P40227	531 aa	Known RBP	20.76	■□□□□ 0.91
C4A-256	ENST00000490663	NLRP11	P59045	1033 aa	Known RBP	20.76	■□□□□ 0.91
C4A-256	ENST00000490663	CEBPZ	Q03701	1054 aa	Known RBP	20.76	■□□□□ 0.91
C4A-256	ENST00000490663	SF3A1	Q15459	793 aa	Known RBP	20.76	■□□□□ 0.91
C4A-256	ENST00000490663	NEK9	Q8TD19	979 aa		20.76	■□□□□ 0.91
C4A-256	ENST00000490663	SEPT8	Q92599	483 aa		20.76	■□□□□ 0.91
C4A-256	ENST00000490663	FAM161B	Q96MY7	647 aa		20.76	■□□□□ 0.91
C4A-256	ENST00000490663	MAP7D2	Q96T17	732 aa		20.76	■□□□□ 0.91
C4A-256	ENST00000490663	LRWD1	Q9UFC0	647 aa		20.76	■□□□□ 0.91
C4A-256	ENST00000490663	COL4A6	Q14031	1691 aa		20.76	■□□□□ 0.91
C4A-256	ENST00000490663	TDRD15	B5MCY1	1934 aa	Known RBP	20.76	■□□□□ 0.91
C4A-256	ENST00000490663	VWA3A	A6NCI4	1184 aa		20.75	■□□□□ 0.91
C4A-256	ENST00000490663	ATP2A2	P16615	1042 aa	Known RBP	20.75	■□□□□ 0.91
C4A-256	ENST00000490663	IBSP	P21815	317 aa	Predicted RBP	20.75	■□□□□ 0.91
C4A-256	ENST00000490663	KCNJ6	P48051	423 aa		20.75	■□□□□ 0.91
C4A-256	ENST00000490663	POLG	P54098	1239 aa	Predicted RBP	20.75	■□□□□ 0.91
C4A-256	ENST00000490663	GRIN1	Q05586	938 aa		20.75	■□□□□ 0.91
C4A-256	ENST00000490663	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	20.75	■□□□□ 0.91
C4A-256	ENST00000490663	FOXD4L3	Q6VB84	417 aa	Predicted RBP	20.75	■□□□□ 0.91
C4A-256	ENST00000490663	TSHZ1	Q6ZSZ6	1077 aa		20.75	■□□□□ 0.91
C4A-256	ENST00000490663	KSR1	Q8IVT5	923 aa		20.75	■□□□□ 0.91
C4A-256	ENST00000490663	SNX29	Q8TEQ0	813 aa		20.75	■□□□□ 0.91
C4A-256	ENST00000490663	TMEM143	Q96AN5	459 aa		20.75	■□□□□ 0.91
C4A-256	ENST00000490663	PBX4	Q9BYU1	374 aa		20.75	■□□□□ 0.91
C4A-256	ENST00000490663	YBX2	Q9Y2T7	364 aa	Known RBP	20.75	■□□□□ 0.91
C4A-256	ENST00000490663	NOC2L	Q9Y3T9	749 aa	Known RBP	20.75	■□□□□ 0.91
C4A-256	ENST00000490663	CHD7	Q9P2D1	2997 aa		20.74	■□□□□ 0.91
C4A-256	ENST00000490663	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	20.74	■□□□□ 0.91
C4A-256	ENST00000490663	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	20.74	■□□□□ 0.91
C4A-256	ENST00000490663	GPR32	O75388	356 aa		20.74	■□□□□ 0.91
C4A-256	ENST00000490663	MAF	O75444	373 aa	Predicted RBP	20.74	■□□□□ 0.91
C4A-256	ENST00000490663	CSDE1	O75534	798 aa	Known RBP	20.74	■□□□□ 0.91
C4A-256	ENST00000490663	BAIAP3	O94812	1187 aa		20.74	■□□□□ 0.91
C4A-256	ENST00000490663	FGFR4	P22455	802 aa		20.74	■□□□□ 0.91
C4A-256	ENST00000490663	DNAJB2	P25686	324 aa		20.74	■□□□□ 0.91
C4A-256	ENST00000490663	IKBKE	Q14164	716 aa		20.74	■□□□□ 0.91
C4A-256	ENST00000490663	EMC2	Q15006	297 aa		20.74	■□□□□ 0.91
C4A-256	ENST00000490663	DTHD1	Q6ZMT9	781 aa		20.74	■□□□□ 0.91
C4A-256	ENST00000490663	IGSF22	Q8N9C0	903 aa		20.74	■□□□□ 0.91
C4A-256	ENST00000490663	LINC01599	Q8WXQ3	324 aa		20.74	■□□□□ 0.91
C4A-256	ENST00000490663	SCLT1	Q96NL6	688 aa		20.74	■□□□□ 0.91
C4A-256	ENST00000490663	NKX2-4	Q9H2Z4	354 aa		20.74	■□□□□ 0.91
C4A-256	ENST00000490663	PLXNA4	Q9HCM2	1894 aa		20.74	■□□□□ 0.91
C4A-256	ENST00000490663	TUFT1	Q9NNX1	390 aa		20.74	■□□□□ 0.91
C4A-256	ENST00000490663	IGKV6-21	A0A0C4DH24	114 aa		20.73	■□□□□ 0.91
C4A-256	ENST00000490663	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	20.73	■□□□□ 0.91
C4A-256	ENST00000490663	USO1	O60763	962 aa	Known RBP	20.73	■□□□□ 0.91
C4A-256	ENST00000490663	TMOD1	P28289	359 aa		20.73	■□□□□ 0.91
C4A-256	ENST00000490663	PRPH	P41219	470 aa		20.73	■□□□□ 0.91
C4A-256	ENST00000490663	GPC3	P51654	580 aa		20.73	■□□□□ 0.91
C4A-256	ENST00000490663	SMAD3	P84022	425 aa	Known RBP	20.73	■□□□□ 0.91
C4A-256	ENST00000490663	ZRSR1	Q15695	479 aa	Known RBP	20.73	■□□□□ 0.91
C4A-256	ENST00000490663	RHPN2	Q8IUC4	686 aa		20.73	■□□□□ 0.91
C4A-256	ENST00000490663	MYOCD	Q8IZQ8	938 aa		20.73	■□□□□ 0.91
C4A-256	ENST00000490663	NME8	Q8N427	588 aa		20.73	■□□□□ 0.91
C4A-256	ENST00000490663	ERMN	Q8TAM6	284 aa		20.73	■□□□□ 0.91
C4A-256	ENST00000490663	CCDC43	Q96MW1	224 aa	Known RBP	20.73	■□□□□ 0.91
C4A-256	ENST00000490663	MMTAG2	Q9BU76	263 aa	Known RBP	20.73	■□□□□ 0.91
C4A-256	ENST00000490663	POLR3C	Q9BUI4	534 aa	Predicted RBP	20.73	■□□□□ 0.91
C4A-256	ENST00000490663	XPNPEP1	Q9NQW7	623 aa		20.73	■□□□□ 0.91
C4A-256	ENST00000490663	SUCLA2	Q9P2R7	463 aa	Predicted RBP	20.73	■□□□□ 0.91
C4A-256	ENST00000490663	PADI3	Q9ULW8	664 aa		20.73	■□□□□ 0.91
C4A-256	ENST00000490663	KDM3A	Q9Y4C1	1321 aa		20.73	■□□□□ 0.91
C4A-256	ENST00000490663	ABHD14A-ACY1	A0A1B0GW23	586 aa		20.72	■□□□□ 0.91
C4A-256	ENST00000490663	LAD1	O00515	517 aa		20.72	■□□□□ 0.91
C4A-256	ENST00000490663	LYPLA2	O95372	231 aa		20.72	■□□□□ 0.91
C4A-256	ENST00000490663	RPA1	P27694	616 aa		20.72	■□□□□ 0.91
C4A-256	ENST00000490663	RARRES1	P49788	294 aa		20.72	■□□□□ 0.91
C4A-256	ENST00000490663	NFX1	Q12986	1120 aa	Known RBP	20.72	■□□□□ 0.91
C4A-256	ENST00000490663	PAK2	Q13177	524 aa		20.72	■□□□□ 0.91
C4A-256	ENST00000490663	MAEA	Q7L5Y9	396 aa		20.72	■□□□□ 0.91
C4A-256	ENST00000490663	OTUD6A	Q7L8S5	288 aa		20.72	■□□□□ 0.91
C4A-256	ENST00000490663	FAM228A	Q86W67	206 aa		20.72	■□□□□ 0.91
C4A-256	ENST00000490663	NLRP7	Q8WX94	980 aa		20.72	■□□□□ 0.91
C4A-256	ENST00000490663	NLRP4	Q96MN2	994 aa		20.72	■□□□□ 0.91
C4A-256	ENST00000490663	USP28	Q96RU2	1077 aa		20.72	■□□□□ 0.91
C4A-256	ENST00000490663	SLC9A7	Q96T83	725 aa		20.72	■□□□□ 0.91
C4A-256	ENST00000490663	PLIN2	Q99541	437 aa		20.72	■□□□□ 0.91
C4A-256	ENST00000490663	ADAMTS10	Q9H324	1103 aa		20.72	■□□□□ 0.91

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms