RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 VTNP04004 478 aa16.06■□□□□ 0.16
SRGAP3-208ENST00000490348 RFC2P35250 354 aa16.06■□□□□ 0.16
SRGAP3-208ENST00000490348 SHHQ15465 462 aa16.06■□□□□ 0.16
SRGAP3-208ENST00000490348 XKR9Q5GH70 373 aa16.06■□□□□ 0.16
SRGAP3-208ENST00000490348 KRT79Q5XKE5 535 aa16.06■□□□□ 0.16
SRGAP3-208ENST00000490348 USP49Q70CQ1 688 aa16.06■□□□□ 0.16
SRGAP3-208ENST00000490348 ZNF365Q70YC5 407 aa16.06■□□□□ 0.16
SRGAP3-208ENST00000490348 OTUD6AQ7L8S5 288 aa16.06■□□□□ 0.16
SRGAP3-208ENST00000490348 KCNK18Q7Z418 384 aa16.06■□□□□ 0.16
SRGAP3-208ENST00000490348 LRRC15Q8TF66 581 aa16.06■□□□□ 0.16
SRGAP3-208ENST00000490348 PNMA5Q96PV4 448 aa16.06■□□□□ 0.16
SRGAP3-208ENST00000490348 CSRNP2Q9H175 543 aa16.06■□□□□ 0.16
SRGAP3-208ENST00000490348 SUGCTQ9HAC7 445 aa16.06■□□□□ 0.16
SRGAP3-208ENST00000490348 BMP2KQ9NSY1 1161 aaPredicted RBP16.06■□□□□ 0.16
SRGAP3-208ENST00000490348 DDX19AQ9NUU7 478 aaKnown RBP16.06■□□□□ 0.16
SRGAP3-208ENST00000490348 CDY2AQ9Y6F7 541 aa16.06■□□□□ 0.16
SRGAP3-208ENST00000490348 GPR32O75388 356 aa16.05■□□□□ 0.16
SRGAP3-208ENST00000490348 XRCC6P12956 609 aaKnown RBP eCLIP16.05■□□□□ 0.16
SRGAP3-208ENST00000490348 MUTP22033 750 aa16.05■□□□□ 0.16
SRGAP3-208ENST00000490348 LONP1P36776 959 aaKnown RBP16.05■□□□□ 0.16
SRGAP3-208ENST00000490348 GRB10Q13322 594 aa16.05■□□□□ 0.16
SRGAP3-208ENST00000490348 SPECC1Q5M775 1068 aa16.05■□□□□ 0.16
SRGAP3-208ENST00000490348 HYIQ5T013 277 aa16.05■□□□□ 0.16
SRGAP3-208ENST00000490348 RSPH3Q86UC2 560 aa16.05■□□□□ 0.16
SRGAP3-208ENST00000490348 NME8Q8N427 588 aa16.05■□□□□ 0.16
SRGAP3-208ENST00000490348 AK8Q96MA6 479 aa16.05■□□□□ 0.16
SRGAP3-208ENST00000490348 ZNF396Q96N95 335 aaPredicted RBP16.05■□□□□ 0.16
SRGAP3-208ENST00000490348 NACC1Q96RE7 527 aa16.05■□□□□ 0.16
SRGAP3-208ENST00000490348 PPP1R16BQ96T49 567 aa16.05■□□□□ 0.16
SRGAP3-208ENST00000490348 XPNPEP1Q9NQW7 623 aa16.05■□□□□ 0.16
SRGAP3-208ENST00000490348 TSHZ2Q9NRE2 1034 aa16.05■□□□□ 0.16
SRGAP3-208ENST00000490348 DBR1Q9UK59 544 aaKnown RBP16.05■□□□□ 0.16
SRGAP3-208ENST00000490348 ANP32AP39687 249 aaKnown RBP16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 LPIN1Q14693 890 aa16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 KIZQ2M2Z5 673 aa16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 TMEM40Q8WWA1 233 aa16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 EPSTI1Q96J88 318 aa16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 ADAMTS10Q9H324 1103 aa16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 PPME1Q9Y570 386 aa16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 STK24Q9Y6E0 443 aa16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 KDM3AQ9Y4C1 1321 aa16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 E9PMD0 336 aa16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 SPTLC2O15270 562 aa16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 PARNO95453 639 aaKnown RBP16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 YEATS4O95619 227 aa16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 RPLP2P05387 115 aaKnown RBP16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 GHRP10912 638 aa16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 RFC5P40937 340 aa16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 POLGP54098 1239 aaPredicted RBP16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 EMC2Q15006 297 aa16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 STK38Q15208 465 aa16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 ZRSR1Q15695 479 aaKnown RBP16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 TMEM119Q4V9L6 283 aa16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 FBXO47Q5MNV8 452 aa16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 RASIP1Q5U651 963 aa16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 IER5Q5VY09 327 aa16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 OTOP2Q7RTS6 562 aa16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 RPUSD2Q8IZ73 545 aaKnown RBP16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 TDHQ8IZJ6 230 aa16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 KRI1Q8N9T8 703 aaKnown RBP16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 SLC7A3Q8WY07 619 aa16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 TMEM143Q96AN5 459 aa16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 ZNF668Q96K58 619 aaPredicted RBP16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 PLIN2Q99541 437 aa16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 CELF4Q9BZC1 486 aaKnown RBP16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 AGO3Q9H9G7 860 aaKnown RBP16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 CXXC1Q9P0U4 656 aaPredicted RBP16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 AKT3Q9Y243 479 aa16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 TRPV2Q9Y5S1 764 aa16.04■□□□□ 0.16
SRGAP3-208ENST00000490348 PFKMP08237 780 aa16.03■□□□□ 0.16
SRGAP3-208ENST00000490348 TMOD1P28289 359 aa16.03■□□□□ 0.16
SRGAP3-208ENST00000490348 PLEKHG4Q58EX7 1191 aa16.03■□□□□ 0.16
SRGAP3-208ENST00000490348 PSRC1Q6PGN9 363 aaPredicted RBP16.03■□□□□ 0.16
SRGAP3-208ENST00000490348 CABP7Q86V35 215 aa16.03■□□□□ 0.16
SRGAP3-208ENST00000490348 KSR1Q8IVT5 923 aa16.03■□□□□ 0.16
SRGAP3-208ENST00000490348 SYMPKQ92797 1274 aaKnown RBP16.03■□□□□ 0.16
SRGAP3-208ENST00000490348 BHMT2Q9H2M3 363 aa16.03■□□□□ 0.16
SRGAP3-208ENST00000490348 SUCLA2Q9P2R7 463 aaPredicted RBP16.03■□□□□ 0.16
SRGAP3-208ENST00000490348 GINS2Q9Y248 185 aa16.03■□□□□ 0.16
SRGAP3-208ENST00000490348 USO1O60763 962 aaKnown RBP16.02■□□□□ 0.16
SRGAP3-208ENST00000490348 PPP6R2O75170 966 aa16.02■□□□□ 0.16
SRGAP3-208ENST00000490348 DGAT1O75907 488 aa16.02■□□□□ 0.16
SRGAP3-208ENST00000490348 FGBP02675 491 aa16.02■□□□□ 0.16
SRGAP3-208ENST00000490348 GPC3P51654 580 aa16.02■□□□□ 0.16
SRGAP3-208ENST00000490348 NLRP11P59045 1033 aaKnown RBP16.02■□□□□ 0.16
SRGAP3-208ENST00000490348 KARSQ15046 597 aaKnown RBP16.02■□□□□ 0.16
SRGAP3-208ENST00000490348 ATL3Q6DD88 541 aa16.02■□□□□ 0.16
SRGAP3-208ENST00000490348 DBF4BQ8NFT6 615 aa16.02■□□□□ 0.16
SRGAP3-208ENST00000490348 HERVK_113Q902F9 699 aa16.02■□□□□ 0.16
SRGAP3-208ENST00000490348 MAP7D2Q96T17 732 aa16.02■□□□□ 0.16
SRGAP3-208ENST00000490348 OSMRQ99650 979 aa16.02■□□□□ 0.16
SRGAP3-208ENST00000490348 RBM19Q9Y4C8 960 aaKnown RBP16.02■□□□□ 0.16
SRGAP3-208ENST00000490348 LOXHD1Q8IVV2 1947 aa16.02■□□□□ 0.15
SRGAP3-208ENST00000490348 EYA4O95677 639 aa16.01■□□□□ 0.15
SRGAP3-208ENST00000490348 UBA7P41226 1012 aa16.01■□□□□ 0.15
SRGAP3-208ENST00000490348 AXDND1Q5T1B0 1012 aaPredicted RBP16.01■□□□□ 0.15
SRGAP3-208ENST00000490348 PADI6Q6TGC4 694 aa16.01■□□□□ 0.15
SRGAP3-208ENST00000490348 PRPF31Q8WWY3 499 aaKnown RBP16.01■□□□□ 0.15
SRGAP3-208ENST00000490348 MTRQ99707 1265 aa16.01■□□□□ 0.15
SRGAP3-208ENST00000490348 JPH2Q9BR39 696 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms