RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 CD320Q9NPF0 282 aa13.37□□□□□ -0.27
SRSF4-204ENST00000489898 DISC1Q9NRI5 854 aa13.37□□□□□ -0.27
SRSF4-204ENST00000489898 ZNF318Q5VUA4 2279 aa13.37□□□□□ -0.27
SRSF4-204ENST00000489898 LTBRP36941 435 aa13.36□□□□□ -0.27
SRSF4-204ENST00000489898 NLRP5P59047 1200 aa13.36□□□□□ -0.27
SRSF4-204ENST00000489898 MRPS5P82675 430 aaKnown RBP13.36□□□□□ -0.27
SRSF4-204ENST00000489898 PPP2R5CQ13362 524 aa13.36□□□□□ -0.27
SRSF4-204ENST00000489898 KIZQ2M2Z5 673 aa13.36□□□□□ -0.27
SRSF4-204ENST00000489898 ANO5Q75V66 913 aa13.36□□□□□ -0.27
SRSF4-204ENST00000489898 POTEDQ86YR6 584 aa13.36□□□□□ -0.27
SRSF4-204ENST00000489898 NPAS4Q8IUM7 802 aa13.36□□□□□ -0.27
SRSF4-204ENST00000489898 TRIM22Q8IYM9 498 aa13.36□□□□□ -0.27
SRSF4-204ENST00000489898 SAMD11Q96NU1 681 aa13.36□□□□□ -0.27
SRSF4-204ENST00000489898 CHMP2AO43633 222 aa13.35□□□□□ -0.27
SRSF4-204ENST00000489898 GTPBP6O43824 516 aaPredicted RBP13.35□□□□□ -0.27
SRSF4-204ENST00000489898 GAS7O60861 476 aa13.35□□□□□ -0.27
SRSF4-204ENST00000489898 NEFLP07196 543 aa13.35□□□□□ -0.27
SRSF4-204ENST00000489898 PSAPP07602 524 aa13.35□□□□□ -0.27
SRSF4-204ENST00000489898 GPC3P51654 580 aa13.35□□□□□ -0.27
SRSF4-204ENST00000489898 PAK2Q13177 524 aa13.35□□□□□ -0.27
SRSF4-204ENST00000489898 NONOQ15233 471 aaKnown RBP eCLIP13.35□□□□□ -0.27
SRSF4-204ENST00000489898 CTC1Q2NKJ3 1217 aa13.35□□□□□ -0.27
SRSF4-204ENST00000489898 IER5Q5VY09 327 aa13.35□□□□□ -0.27
SRSF4-204ENST00000489898 GALNT17Q6IS24 598 aa13.35□□□□□ -0.27
SRSF4-204ENST00000489898 RSPH3Q86UC2 560 aa13.35□□□□□ -0.27
SRSF4-204ENST00000489898 CMTR2Q8IYT2 770 aaKnown RBP13.35□□□□□ -0.27
SRSF4-204ENST00000489898 NME8Q8N427 588 aa13.35□□□□□ -0.27
SRSF4-204ENST00000489898 ZNF579Q8NAF0 562 aaKnown RBP13.35□□□□□ -0.27
SRSF4-204ENST00000489898 RDM1Q8NG50 284 aa13.35□□□□□ -0.27
SRSF4-204ENST00000489898 NEK9Q8TD19 979 aa13.35□□□□□ -0.27
SRSF4-204ENST00000489898 SH2D3AQ9BRG2 576 aa13.35□□□□□ -0.27
SRSF4-204ENST00000489898 NIFKQ9BYG3 293 aaKnown RBP13.35□□□□□ -0.27
SRSF4-204ENST00000489898 UBE2ZQ9H832 354 aaPredicted RBP13.35□□□□□ -0.27
SRSF4-204ENST00000489898 VWA8A3KMH1 1905 aa13.35□□□□□ -0.27
SRSF4-204ENST00000489898 USP34Q70CQ2 3546 aa13.34□□□□□ -0.27
SRSF4-204ENST00000489898 TBX10O75333 385 aa13.34□□□□□ -0.27
SRSF4-204ENST00000489898 MMP1P03956 469 aa13.34□□□□□ -0.27
SRSF4-204ENST00000489898 SFNP31947 248 aa13.34□□□□□ -0.27
SRSF4-204ENST00000489898 CTNNB1P35222 781 aa13.34□□□□□ -0.27
SRSF4-204ENST00000489898 BMPR1AP36894 532 aa13.34□□□□□ -0.27
SRSF4-204ENST00000489898 SARSP49591 514 aaKnown RBP13.34□□□□□ -0.27
SRSF4-204ENST00000489898 JAK3P52333 1124 aa13.34□□□□□ -0.27
SRSF4-204ENST00000489898 FAM189BP81408 668 aa13.34□□□□□ -0.27
SRSF4-204ENST00000489898 AKAP17AQ02040 695 aaKnown RBP13.34□□□□□ -0.27
SRSF4-204ENST00000489898 TCEAL5Q5H9L2 206 aa13.34□□□□□ -0.27
SRSF4-204ENST00000489898 PPP4R3AQ6IN85 833 aa13.34□□□□□ -0.27
SRSF4-204ENST00000489898 KRT25Q7Z3Z0 450 aa13.34□□□□□ -0.27
SRSF4-204ENST00000489898 ZNF598Q86UK7 904 aaKnown RBP13.34□□□□□ -0.27
SRSF4-204ENST00000489898 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.34□□□□□ -0.27
SRSF4-204ENST00000489898 FAM167AQ96KS9 214 aa13.34□□□□□ -0.27
SRSF4-204ENST00000489898 UHRF1Q96T88 793 aaPredicted RBP13.34□□□□□ -0.27
SRSF4-204ENST00000489898 TEKT3Q9BXF9 490 aa13.34□□□□□ -0.27
SRSF4-204ENST00000489898 FTHL17Q9BXU8 183 aa13.34□□□□□ -0.27
SRSF4-204ENST00000489898 RGS18Q9NS28 235 aa13.34□□□□□ -0.27
SRSF4-204ENST00000489898 ST3GAL5Q9UNP4 418 aa13.34□□□□□ -0.27
SRSF4-204ENST00000489898 COG5Q9UP83 839 aa13.34□□□□□ -0.27
SRSF4-204ENST00000489898 PCDHGC5Q9Y5F6 944 aa13.34□□□□□ -0.27
SRSF4-204ENST00000489898 MYH11P35749 1972 aa13.34□□□□□ -0.27
SRSF4-204ENST00000489898 TNFRSF10AO00220 468 aa13.33□□□□□ -0.28
SRSF4-204ENST00000489898 CPLX1O14810 134 aa13.33□□□□□ -0.28
SRSF4-204ENST00000489898 ITGB1P05556 798 aa13.33□□□□□ -0.28
SRSF4-204ENST00000489898 GTF2F1P35269 517 aaKnown RBP eCLIP13.33□□□□□ -0.28
SRSF4-204ENST00000489898 IRS1P35568 1242 aa13.33□□□□□ -0.28
SRSF4-204ENST00000489898 CRYBB1P53674 252 aaPredicted RBP13.33□□□□□ -0.28
SRSF4-204ENST00000489898 DLX2Q07687 328 aaPredicted RBP13.33□□□□□ -0.28
SRSF4-204ENST00000489898 GPM6BQ13491 265 aa13.33□□□□□ -0.28
SRSF4-204ENST00000489898 PLA2G4FQ68DD2 849 aa13.33□□□□□ -0.28
SRSF4-204ENST00000489898 LRRC55Q6ZSA7 311 aa13.33□□□□□ -0.28
SRSF4-204ENST00000489898 NEK8Q86SG6 692 aa13.33□□□□□ -0.28
SRSF4-204ENST00000489898 BANK1Q8NDB2 785 aa13.33□□□□□ -0.28
SRSF4-204ENST00000489898 ZNF668Q96K58 619 aaPredicted RBP13.33□□□□□ -0.28
SRSF4-204ENST00000489898 SLKQ9H2G2 1235 aaPredicted RBP13.33□□□□□ -0.28
SRSF4-204ENST00000489898 CWH43Q9H720 699 aa13.33□□□□□ -0.28
SRSF4-204ENST00000489898 C11orf16Q9NQ32 467 aa13.33□□□□□ -0.28
SRSF4-204ENST00000489898 ORC3Q9UBD5 711 aaPredicted RBP13.33□□□□□ -0.28
SRSF4-204ENST00000489898 DDX25Q9UHL0 483 aaKnown RBP13.33□□□□□ -0.28
SRSF4-204ENST00000489898 B4GALT3O60512 393 aa13.32□□□□□ -0.28
SRSF4-204ENST00000489898 RPS6KA5O75582 802 aa13.32□□□□□ -0.28
SRSF4-204ENST00000489898 GLP2RO95838 553 aa13.32□□□□□ -0.28
SRSF4-204ENST00000489898 DARSP14868 501 aaKnown RBP13.32□□□□□ -0.28
SRSF4-204ENST00000489898 HYAL1Q12794 435 aa13.32□□□□□ -0.28
SRSF4-204ENST00000489898 LETM2Q2VYF4 491 aa13.32□□□□□ -0.28
SRSF4-204ENST00000489898 TIGD5Q53EQ6 642 aa13.32□□□□□ -0.28
SRSF4-204ENST00000489898 CLLU1OSQ5K130 101 aa13.32□□□□□ -0.28
SRSF4-204ENST00000489898 FAM102BQ5T8I3 360 aa13.32□□□□□ -0.28
SRSF4-204ENST00000489898 EFCAB12Q6NXP0 572 aa13.32□□□□□ -0.28
SRSF4-204ENST00000489898 PIK3AP1Q6ZUJ8 805 aa13.32□□□□□ -0.28
SRSF4-204ENST00000489898 ADGRD2Q7Z7M1 963 aa13.32□□□□□ -0.28
SRSF4-204ENST00000489898 FIBCD1Q8N539 461 aa13.32□□□□□ -0.28
SRSF4-204ENST00000489898 SYMPKQ92797 1274 aaKnown RBP13.32□□□□□ -0.28
SRSF4-204ENST00000489898 P2RX5Q93086 422 aa13.32□□□□□ -0.28
SRSF4-204ENST00000489898 HLA-CQ95604 372 aa13.32□□□□□ -0.28
SRSF4-204ENST00000489898 ADAM2Q99965 735 aa13.32□□□□□ -0.28
SRSF4-204ENST00000489898 C22orf23Q9BZE7 217 aa13.32□□□□□ -0.28
SRSF4-204ENST00000489898 XPNPEP1Q9NQW7 623 aa13.32□□□□□ -0.28
SRSF4-204ENST00000489898 MTCL1Q9Y4B5 1905 aaKnown RBP13.31□□□□□ -0.28
SRSF4-204ENST00000489898 MEIS3P2A8K0S8 358 aa13.31□□□□□ -0.28
SRSF4-204ENST00000489898 RB1P06400 928 aa13.31□□□□□ -0.28
SRSF4-204ENST00000489898 FGFR1P11362 822 aa13.31□□□□□ -0.28
SRSF4-204ENST00000489898 IL9P15248 144 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms