RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 CTNNB1P35222 781 aa13.21□□□□□ -0.29
GGPS1-207ENST00000489692 HTRA4P83105 476 aaPredicted RBP13.21□□□□□ -0.29
GGPS1-207ENST00000489692 TFF2Q03403 129 aa13.21□□□□□ -0.29
GGPS1-207ENST00000489692 PTPROQ16827 1216 aa13.21□□□□□ -0.29
GGPS1-207ENST00000489692 TMEM266Q2M3C6 531 aa13.21□□□□□ -0.29
GGPS1-207ENST00000489692 LRCH2Q5VUJ6 765 aa13.21□□□□□ -0.29
GGPS1-207ENST00000489692 NME8Q8N427 588 aa13.21□□□□□ -0.29
GGPS1-207ENST00000489692 FIBCD1Q8N539 461 aa13.21□□□□□ -0.29
GGPS1-207ENST00000489692 ADAMTS19Q8TE59 1207 aa13.21□□□□□ -0.29
GGPS1-207ENST00000489692 CRYGNQ8WXF5 182 aa13.21□□□□□ -0.29
GGPS1-207ENST00000489692 SCLT1Q96NL6 688 aa13.21□□□□□ -0.29
GGPS1-207ENST00000489692 AIFM3Q96NN9 605 aa13.21□□□□□ -0.29
GGPS1-207ENST00000489692 TEKT3Q9BXF9 490 aa13.21□□□□□ -0.29
GGPS1-207ENST00000489692 CELF4Q9BZC1 486 aaKnown RBP13.21□□□□□ -0.29
GGPS1-207ENST00000489692 DISC1Q9NRI5 854 aa13.21□□□□□ -0.29
GGPS1-207ENST00000489692 LRFN2Q9ULH4 789 aa13.21□□□□□ -0.29
GGPS1-207ENST00000489692 CCDC194A0A1B0GVG4 234 aa13.2□□□□□ -0.3
GGPS1-207ENST00000489692 ENPP3O14638 875 aa13.2□□□□□ -0.3
GGPS1-207ENST00000489692 MSH4O15457 936 aa13.2□□□□□ -0.3
GGPS1-207ENST00000489692 MARCH6O60337 910 aa13.2□□□□□ -0.3
GGPS1-207ENST00000489692 YEATS4O95619 227 aa13.2□□□□□ -0.3
GGPS1-207ENST00000489692 CCDC192P0DO97 292 aa13.2□□□□□ -0.3
GGPS1-207ENST00000489692 LIG1P18858 919 aa13.2□□□□□ -0.3
GGPS1-207ENST00000489692 CIITAP33076 1130 aa13.2□□□□□ -0.3
GGPS1-207ENST00000489692 USP11P51784 963 aa13.2□□□□□ -0.3
GGPS1-207ENST00000489692 GPM6BQ13491 265 aa13.2□□□□□ -0.3
GGPS1-207ENST00000489692 BTG3Q14201 252 aaPredicted RBP13.2□□□□□ -0.3
GGPS1-207ENST00000489692 EPC2Q52LR7 807 aa13.2□□□□□ -0.3
GGPS1-207ENST00000489692 EP400NLQ6ZTU2 488 aa13.2□□□□□ -0.3
GGPS1-207ENST00000489692 TMEM192Q8IY95 271 aa13.2□□□□□ -0.3
GGPS1-207ENST00000489692 BBXQ8WY36 941 aaPredicted RBP13.2□□□□□ -0.3
GGPS1-207ENST00000489692 WASF1Q92558 559 aa13.2□□□□□ -0.3
GGPS1-207ENST00000489692 HLA-CQ95604 372 aa13.2□□□□□ -0.3
GGPS1-207ENST00000489692 FAM167AQ96KS9 214 aa13.2□□□□□ -0.3
GGPS1-207ENST00000489692 SAMD11Q96NU1 681 aa13.2□□□□□ -0.3
GGPS1-207ENST00000489692 FTHL17Q9BXU8 183 aa13.2□□□□□ -0.3
GGPS1-207ENST00000489692 AGO3Q9H9G7 860 aaKnown RBP13.2□□□□□ -0.3
GGPS1-207ENST00000489692 PADI3Q9ULW8 664 aa13.2□□□□□ -0.3
GGPS1-207ENST00000489692 KCNJ14Q9UNX9 436 aa13.2□□□□□ -0.3
GGPS1-207ENST00000489692 COG5Q9UP83 839 aa13.2□□□□□ -0.3
GGPS1-207ENST00000489692 CEP131Q9UPN4 1083 aa13.2□□□□□ -0.3
GGPS1-207ENST00000489692 TANC1Q9C0D5 1861 aa13.2□□□□□ -0.3
GGPS1-207ENST00000489692 IGKV6D-21A0A0A0MT36 114 aa13.19□□□□□ -0.3
GGPS1-207ENST00000489692 DENND3A2RUS2 1198 aa13.19□□□□□ -0.3
GGPS1-207ENST00000489692 ESPNB1AK53 854 aa13.19□□□□□ -0.3
GGPS1-207ENST00000489692 LPXNO60711 386 aa13.19□□□□□ -0.3
GGPS1-207ENST00000489692 TDP2O95551 362 aa13.19□□□□□ -0.3
GGPS1-207ENST00000489692 STAG3L1P0CL83 205 aa13.19□□□□□ -0.3
GGPS1-207ENST00000489692 POU3F3P20264 500 aaPredicted RBP13.19□□□□□ -0.3
GGPS1-207ENST00000489692 JAK3P52333 1124 aa13.19□□□□□ -0.3
GGPS1-207ENST00000489692 MKRN4PQ13434 485 aaPredicted RBP13.19□□□□□ -0.3
GGPS1-207ENST00000489692 NONOQ15233 471 aaKnown RBP eCLIP13.19□□□□□ -0.3
GGPS1-207ENST00000489692 INF2Q27J81 1249 aa13.19□□□□□ -0.3
GGPS1-207ENST00000489692 GALNT17Q6IS24 598 aa13.19□□□□□ -0.3
GGPS1-207ENST00000489692 MIER3Q7Z3K6 550 aa13.19□□□□□ -0.3
GGPS1-207ENST00000489692 KRT25Q7Z3Z0 450 aa13.19□□□□□ -0.3
GGPS1-207ENST00000489692 SP7Q8TDD2 431 aaPredicted RBP13.19□□□□□ -0.3
GGPS1-207ENST00000489692 GJA10Q969M2 543 aa13.19□□□□□ -0.3
GGPS1-207ENST00000489692 USP28Q96RU2 1077 aa13.19□□□□□ -0.3
GGPS1-207ENST00000489692 MAP7D2Q96T17 732 aa13.19□□□□□ -0.3
GGPS1-207ENST00000489692 UHRF1Q96T88 793 aaPredicted RBP13.19□□□□□ -0.3
GGPS1-207ENST00000489692 NRBP2Q9NSY0 501 aa13.19□□□□□ -0.3
GGPS1-207ENST00000489692 LMCD1Q9NZU5 365 aa13.19□□□□□ -0.3
GGPS1-207ENST00000489692 AKT3Q9Y243 479 aa13.19□□□□□ -0.3
GGPS1-207ENST00000489692 CHD7Q9P2D1 2997 aa13.19□□□□□ -0.3
GGPS1-207ENST00000489692 COL1A2P08123 1366 aa13.19□□□□□ -0.3
GGPS1-207ENST00000489692 MYH7BA7E2Y1 1941 aa13.18□□□□□ -0.3
GGPS1-207ENST00000489692 A0A1W2PQ27 194 aa13.18□□□□□ -0.3
GGPS1-207ENST00000489692 A0A1W2PQ64 194 aa13.18□□□□□ -0.3
GGPS1-207ENST00000489692 A0A1W2PQD8 194 aa13.18□□□□□ -0.3
GGPS1-207ENST00000489692 RPS6KA5O75582 802 aa13.18□□□□□ -0.3
GGPS1-207ENST00000489692 CAVIN2O95810 425 aa13.18□□□□□ -0.3
GGPS1-207ENST00000489692 VTNP04004 478 aa13.18□□□□□ -0.3
GGPS1-207ENST00000489692 TMOD1P28289 359 aa13.18□□□□□ -0.3
GGPS1-207ENST00000489692 SFNP31947 248 aa13.18□□□□□ -0.3
GGPS1-207ENST00000489692 CLCN1P35523 988 aa13.18□□□□□ -0.3
GGPS1-207ENST00000489692 KCNQ1P51787 676 aa13.18□□□□□ -0.3
GGPS1-207ENST00000489692 CLCN3P51790 818 aa13.18□□□□□ -0.3
GGPS1-207ENST00000489692 KIZQ2M2Z5 673 aa13.18□□□□□ -0.3
GGPS1-207ENST00000489692 LETM2Q2VYF4 491 aa13.18□□□□□ -0.3
GGPS1-207ENST00000489692 PAN2Q504Q3 1202 aaKnown RBP13.18□□□□□ -0.3
GGPS1-207ENST00000489692 ODR4Q5SWX8 454 aa13.18□□□□□ -0.3
GGPS1-207ENST00000489692 KIAA0319LQ8IZA0 1049 aa13.18□□□□□ -0.3
GGPS1-207ENST00000489692 KCNG4Q8TDN1 519 aa13.18□□□□□ -0.3
GGPS1-207ENST00000489692 LENG9Q96B70 501 aa13.18□□□□□ -0.3
GGPS1-207ENST00000489692 RIT2Q99578 217 aa13.18□□□□□ -0.3
GGPS1-207ENST00000489692 OSMRQ99650 979 aa13.18□□□□□ -0.3
GGPS1-207ENST00000489692 TNMDQ9H2S6 317 aa13.18□□□□□ -0.3
GGPS1-207ENST00000489692 UNC45AQ9H3U1 944 aa13.18□□□□□ -0.3
GGPS1-207ENST00000489692 BRMS1Q9HCU9 246 aa13.18□□□□□ -0.3
GGPS1-207ENST00000489692 RRAGDQ9NQL2 400 aaPredicted RBP13.18□□□□□ -0.3
GGPS1-207ENST00000489692 DACT1Q9NYF0 836 aa13.18□□□□□ -0.3
GGPS1-207ENST00000489692 DDX25Q9UHL0 483 aaKnown RBP13.18□□□□□ -0.3
GGPS1-207ENST00000489692 MAFBQ9Y5Q3 323 aaPredicted RBP13.18□□□□□ -0.3
GGPS1-207ENST00000489692 SQORQ9Y6N5 450 aa13.18□□□□□ -0.3
GGPS1-207ENST00000489692 ADGRA3Q8IWK6 1321 aa13.17□□□□□ -0.3
GGPS1-207ENST00000489692 IGSF9BQ9UPX0 1349 aa13.17□□□□□ -0.3
GGPS1-207ENST00000489692 TNFRSF10AO00220 468 aa13.17□□□□□ -0.3
GGPS1-207ENST00000489692 GPR182O15218 404 aa13.17□□□□□ -0.3
GGPS1-207ENST00000489692 MAGEB2O15479 319 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms