RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 ARHGEF16Q5VV41 709 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 NCAPH2Q6IBW4 605 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 ZNF746Q6NUN9 644 aaPredicted RBP7.03□□□□□ -1.28
SF3A3-208ENST00000489537 TTI2Q6NXR4 508 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 CYP26C1Q6V0L0 522 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 LBX2Q6XYB7 198 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 CATSPERGQ6ZRH7 1159 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 OTUD6AQ7L8S5 288 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 RASGRP2Q7LDG7 609 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 OTOP1Q7RTM1 612 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 ARMC9Q7Z3E5 817 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 USP37Q86T82 979 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 ERO1BQ86YB8 467 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 SMAP1Q8IYB5 467 aaPredicted RBP7.03□□□□□ -1.28
SF3A3-208ENST00000489537 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.03□□□□□ -1.28
SF3A3-208ENST00000489537 LENG9Q96B70 501 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 TRERF1Q96PN7 1200 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 HSD17B14Q9BPX1 270 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 EIF2AK1Q9BQI3 630 aaKnown RBP7.03□□□□□ -1.28
SF3A3-208ENST00000489537 TUBGCP2Q9BSJ2 902 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 TMX1Q9H3N1 280 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 ACAD9Q9H845 621 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 C17orf75Q9HAS0 396 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 JADE2Q9NQC1 790 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 LARSQ9P2J5 1176 aaKnown RBP7.03□□□□□ -1.28
SF3A3-208ENST00000489537 MYO1AQ9UBC5 1043 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 DBR1Q9UK59 544 aaKnown RBP7.03□□□□□ -1.28
SF3A3-208ENST00000489537 LUC7L2Q9Y383 392 aaKnown RBP7.03□□□□□ -1.28
SF3A3-208ENST00000489537 UBIAD1Q9Y5Z9 338 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 PAPPA2Q9BXP8 1791 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 ARHGEF35A5YM69 484 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 MYMKA6NI61 221 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 CCDC85CA6NKD9 419 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 WDR64B1ANS9 1081 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 FAM86B1E9PN63 330 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 OPLAHO14841 1288 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 SLC16A3O15427 465 aaKnown RBP7.02□□□□□ -1.29
SF3A3-208ENST00000489537 FAM13AO94988 1023 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 SSBP05455 408 aaKnown RBP eCLIP7.02□□□□□ -1.29
SF3A3-208ENST00000489537 CCDC175P0C221 793 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 FAM86B2P0C5J1 330 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 TGFB3P10600 412 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 TRIM21P19474 475 aaKnown RBP7.02□□□□□ -1.29
SF3A3-208ENST00000489537 GUCY2CP25092 1073 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 HOXA13P31271 388 aaPredicted RBP7.02□□□□□ -1.29
SF3A3-208ENST00000489537 INPP5BP32019 993 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 STAT3P40763 770 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 MARSP56192 900 aaKnown RBP7.02□□□□□ -1.29
SF3A3-208ENST00000489537 KRT83P78385 493 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 JAG1P78504 1218 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 CDK17Q00537 523 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 EHHADHQ08426 723 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 TBC1D8BQ0IIM8 1120 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 COASYQ13057 564 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 NOGQ13253 232 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 KRT31Q15323 416 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 ZYXQ15942 572 aaKnown RBP7.02□□□□□ -1.29
SF3A3-208ENST00000489537 BMT2Q1RMZ1 405 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 LINC01559Q495D7 138 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 PRPF38BQ5VTL8 546 aaKnown RBP7.02□□□□□ -1.29
SF3A3-208ENST00000489537 HS2ST1Q7LGA3 356 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 MIER3Q7Z3K6 550 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 CATSPER3Q86XQ3 398 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 DHX37Q8IY37 1157 aaKnown RBP7.02□□□□□ -1.29
SF3A3-208ENST00000489537 CCDC170Q8IYT3 715 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 CCAR2Q8N163 923 aaKnown RBP7.02□□□□□ -1.29
SF3A3-208ENST00000489537 C2orf69Q8N8R5 385 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 ZNF511Q8NB15 262 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 OR8K1Q8NGG5 319 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 SYTL5Q8TDW5 730 aaPredicted RBP7.02□□□□□ -1.29
SF3A3-208ENST00000489537 UBE2Q2Q8WVN8 375 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 BAP1Q92560 729 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 STAMQ92783 540 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 ATP6V0A1Q93050 837 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 HVCN1Q96D96 273 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 DRC1Q96MC2 740 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 NAP1L5Q96NT1 182 aaPredicted RBP7.02□□□□□ -1.29
SF3A3-208ENST00000489537 ERGIC2Q96RQ1 377 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 RMDN3Q96TC7 470 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 SENP7Q9BQF6 1050 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 MKNK1Q9BUB5 465 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 NOC4LQ9BVI4 516 aaKnown RBP7.02□□□□□ -1.29
SF3A3-208ENST00000489537 KCNF1Q9H3M0 494 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 TMEM206Q9H813 350 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 PARVGQ9HBI0 331 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 SAMSN1Q9NSI8 373 aaKnown RBP7.02□□□□□ -1.29
SF3A3-208ENST00000489537 RNF146Q9NTX7 359 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 ANKEF1Q9NU02 776 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 VAV3Q9UKW4 847 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 AFG3L2Q9Y4W6 797 aa7.02□□□□□ -1.29
SF3A3-208ENST00000489537 NFASCO94856 1347 aa7.01□□□□□ -1.29
SF3A3-208ENST00000489537 PHLPP2Q6ZVD8 1323 aa7.01□□□□□ -1.29
SF3A3-208ENST00000489537 PES1O00541 588 aaKnown RBP7.01□□□□□ -1.29
SF3A3-208ENST00000489537 DYNC1I1O14576 645 aa7.01□□□□□ -1.29
SF3A3-208ENST00000489537 ADAMTS3O15072 1205 aa7.01□□□□□ -1.29
SF3A3-208ENST00000489537 SPTLC1O15269 473 aa7.01□□□□□ -1.29
SF3A3-208ENST00000489537 CAPN5O15484 640 aaPredicted RBP7.01□□□□□ -1.29
SF3A3-208ENST00000489537 SIAH2O43255 324 aa7.01□□□□□ -1.29
SF3A3-208ENST00000489537 TBC1D8O95759 1140 aa7.01□□□□□ -1.29
SF3A3-208ENST00000489537 CCDC172P0C7W6 258 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms