RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 BMS1Q14692 1282 aaKnown RBP17.43■□□□□ 0.38
UFD1-209ENST00000489406 TSSK4Q6SA08 328 aa17.43■□□□□ 0.38
UFD1-209ENST00000489406 SLC39A11Q8N1S5 342 aa17.43■□□□□ 0.38
UFD1-209ENST00000489406 DDX1Q92499 740 aaKnown RBP17.43■□□□□ 0.38
UFD1-209ENST00000489406 CASD1Q96PB1 797 aa17.43■□□□□ 0.38
UFD1-209ENST00000489406 TMEM117Q9H0C3 514 aa17.43■□□□□ 0.38
UFD1-209ENST00000489406 TMEM161AQ9NX61 479 aa17.43■□□□□ 0.38
UFD1-209ENST00000489406 ANAPC4Q9UJX5 808 aa17.43■□□□□ 0.38
UFD1-209ENST00000489406 IGF2RP11717 2491 aa17.42■□□□□ 0.38
UFD1-209ENST00000489406 FOXP2O15409 715 aa17.42■□□□□ 0.38
UFD1-209ENST00000489406 FGRP09769 529 aa17.42■□□□□ 0.38
UFD1-209ENST00000489406 STARD6P59095 220 aa17.42■□□□□ 0.38
UFD1-209ENST00000489406 KRT76Q01546 638 aa17.42■□□□□ 0.38
UFD1-209ENST00000489406 GHRHRQ02643 423 aa17.42■□□□□ 0.38
UFD1-209ENST00000489406 UNQ6494/PRO21346Q6UXR6 183 aa17.42■□□□□ 0.38
UFD1-209ENST00000489406 FCHSD1Q86WN1 690 aa17.42■□□□□ 0.38
UFD1-209ENST00000489406 TTC14Q96N46 770 aa17.42■□□□□ 0.38
UFD1-209ENST00000489406 ECHDC1Q9NTX5 307 aa17.42■□□□□ 0.38
UFD1-209ENST00000489406 ERAP1Q9NZ08 941 aa17.42■□□□□ 0.38
UFD1-209ENST00000489406 RTEL1Q9NZ71 1219 aa17.42■□□□□ 0.38
UFD1-209ENST00000489406 GINS2Q9Y248 185 aa17.42■□□□□ 0.38
UFD1-209ENST00000489406 NOC2LQ9Y3T9 749 aaKnown RBP17.42■□□□□ 0.38
UFD1-209ENST00000489406 NT5C1B-RDH14C9J2C7 533 aa17.41■□□□□ 0.38
UFD1-209ENST00000489406 RPS6KA5O75582 802 aa17.41■□□□□ 0.38
UFD1-209ENST00000489406 INSRRP14616 1297 aa17.41■□□□□ 0.38
UFD1-209ENST00000489406 MRPS9P82933 396 aaKnown RBP17.41■□□□□ 0.38
UFD1-209ENST00000489406 VPS52Q8N1B4 723 aa17.41■□□□□ 0.38
UFD1-209ENST00000489406 LRRC43Q8N309 656 aa17.41■□□□□ 0.38
UFD1-209ENST00000489406 NELL1Q92832 810 aa17.41■□□□□ 0.38
UFD1-209ENST00000489406 SHDQ96IW2 340 aa17.41■□□□□ 0.38
UFD1-209ENST00000489406 JMJD4Q9H9V9 463 aa17.41■□□□□ 0.38
UFD1-209ENST00000489406 MAP3K20Q9NYL2 800 aaKnown RBP17.41■□□□□ 0.38
UFD1-209ENST00000489406 RAB23Q9ULC3 237 aa17.41■□□□□ 0.38
UFD1-209ENST00000489406 LHX6Q9UPM6 363 aa17.41■□□□□ 0.38
UFD1-209ENST00000489406 C2orf16Q68DN1 1984 aa17.4■□□□□ 0.38
UFD1-209ENST00000489406 FIBPO43427 364 aa17.4■□□□□ 0.38
UFD1-209ENST00000489406 HMMRO75330 724 aa17.4■□□□□ 0.38
UFD1-209ENST00000489406 METAP2P50579 478 aaKnown RBP eCLIP17.4■□□□□ 0.38
UFD1-209ENST00000489406 FAM189BP81408 668 aa17.4■□□□□ 0.38
UFD1-209ENST00000489406 IL31Q6EBC2 164 aa17.4■□□□□ 0.38
UFD1-209ENST00000489406 PRR23CQ6ZRP0 262 aa17.4■□□□□ 0.38
UFD1-209ENST00000489406 SIRT2Q8IXJ6 389 aa17.4■□□□□ 0.38
UFD1-209ENST00000489406 ST13P5Q8NFI4 369 aaPredicted RBP17.4■□□□□ 0.38
UFD1-209ENST00000489406 NXPE3Q969Y0 559 aa17.4■□□□□ 0.38
UFD1-209ENST00000489406 INPP4AQ96PE3 977 aaPredicted RBP17.4■□□□□ 0.38
UFD1-209ENST00000489406 MYADMQ96S97 322 aa17.4■□□□□ 0.38
UFD1-209ENST00000489406 AMNQ9BXJ7 453 aa17.4■□□□□ 0.38
UFD1-209ENST00000489406 SEMA4GQ9NTN9 838 aa17.4■□□□□ 0.38
UFD1-209ENST00000489406 EPS15L1Q9UBC2 864 aa17.4■□□□□ 0.38
UFD1-209ENST00000489406 ST3GAL5Q9UNP4 418 aa17.4■□□□□ 0.38
UFD1-209ENST00000489406 MTF2Q9Y483 593 aaPredicted RBP17.4■□□□□ 0.38
UFD1-209ENST00000489406 MYH6P13533 1939 aa17.4■□□□□ 0.38
UFD1-209ENST00000489406 MIA3Q5JRA6 1907 aa17.4■□□□□ 0.38
UFD1-209ENST00000489406 KDM3AQ9Y4C1 1321 aa17.4■□□□□ 0.38
UFD1-209ENST00000489406 PATJQ8NI35 1801 aa17.4■□□□□ 0.38
UFD1-209ENST00000489406 KANSL1LA0AUZ9 987 aa17.39■□□□□ 0.37
UFD1-209ENST00000489406 RRN3P2A6NIE6 340 aa17.39■□□□□ 0.37
UFD1-209ENST00000489406 SMARCA5O60264 1052 aaPredicted RBP17.39■□□□□ 0.37
UFD1-209ENST00000489406 RING1Q06587 406 aa17.39■□□□□ 0.37
UFD1-209ENST00000489406 UBXN2BQ14CS0 331 aa17.39■□□□□ 0.37
UFD1-209ENST00000489406 TSHZ3Q63HK5 1081 aa17.39■□□□□ 0.37
UFD1-209ENST00000489406 C15orf39Q6ZRI6 1047 aa17.39■□□□□ 0.37
UFD1-209ENST00000489406 ABI1Q8IZP0 508 aa17.39■□□□□ 0.37
UFD1-209ENST00000489406 KDF1Q8NAX2 398 aaPredicted RBP17.39■□□□□ 0.37
UFD1-209ENST00000489406 TRAPPC12Q8WVT3 735 aa17.39■□□□□ 0.37
UFD1-209ENST00000489406 ZBP1Q9H171 429 aa17.39■□□□□ 0.37
UFD1-209ENST00000489406 ELAC1Q9H777 363 aaKnown RBP17.39■□□□□ 0.37
UFD1-209ENST00000489406 CDHR5Q9HBB8 845 aa17.39■□□□□ 0.37
UFD1-209ENST00000489406 SLC2A4RGQ9NR83 387 aa17.39■□□□□ 0.37
UFD1-209ENST00000489406 RNF19AQ9NV58 838 aa17.39■□□□□ 0.37
UFD1-209ENST00000489406 ASH1LQ9NR48 2969 aaKnown RBP17.39■□□□□ 0.37
UFD1-209ENST00000489406 COL4A3Q01955 1670 aa17.39■□□□□ 0.37
UFD1-209ENST00000489406 SNW1Q13573 536 aaKnown RBP17.38■□□□□ 0.37
UFD1-209ENST00000489406 LAIR1Q6GTX8 287 aa17.38■□□□□ 0.37
UFD1-209ENST00000489406 TMEM169Q96HH4 297 aa17.38■□□□□ 0.37
UFD1-209ENST00000489406 PCDHA2Q9Y5H9 948 aa17.38■□□□□ 0.37
UFD1-209ENST00000489406 IRAK3Q9Y616 596 aa17.38■□□□□ 0.37
UFD1-209ENST00000489406 MAST4O15021 2626 aa17.37■□□□□ 0.37
UFD1-209ENST00000489406 GSTTP1A0A1W2PQM5 241 aa17.37■□□□□ 0.37
UFD1-209ENST00000489406 FAM170BA6NMN3 283 aa17.37■□□□□ 0.37
UFD1-209ENST00000489406 GCOM1H8Y6P7 765 aaPredicted RBP17.37■□□□□ 0.37
UFD1-209ENST00000489406 HOXA2O43364 376 aa17.37■□□□□ 0.37
UFD1-209ENST00000489406 RETP07949 1114 aa17.37■□□□□ 0.37
UFD1-209ENST00000489406 POLR2MP0CAP2 368 aa17.37■□□□□ 0.37
UFD1-209ENST00000489406 GIT2Q14161 759 aa17.37■□□□□ 0.37
UFD1-209ENST00000489406 VPS53Q5VIR6 699 aa17.37■□□□□ 0.37
UFD1-209ENST00000489406 PPFIBP1Q86W92 1011 aa17.37■□□□□ 0.37
UFD1-209ENST00000489406 TMEM40Q8WWA1 233 aa17.37■□□□□ 0.37
UFD1-209ENST00000489406 BBXQ8WY36 941 aaPredicted RBP17.37■□□□□ 0.37
UFD1-209ENST00000489406 STAMQ92783 540 aa17.37■□□□□ 0.37
UFD1-209ENST00000489406 ZKSCAN3Q9BRR0 538 aa17.37■□□□□ 0.37
UFD1-209ENST00000489406 SMARCAD1Q9H4L7 1026 aa17.37■□□□□ 0.37
UFD1-209ENST00000489406 PPP1R11O60927 126 aaPredicted RBP17.36■□□□□ 0.37
UFD1-209ENST00000489406 LRP3O75074 770 aa17.36■□□□□ 0.37
UFD1-209ENST00000489406 STAM2O75886 525 aa17.36■□□□□ 0.37
UFD1-209ENST00000489406 CTSAP10619 480 aa17.36■□□□□ 0.37
UFD1-209ENST00000489406 ALDH7A1P49419 539 aaKnown RBP17.36■□□□□ 0.37
UFD1-209ENST00000489406 CSRP2Q16527 193 aa17.36■□□□□ 0.37
UFD1-209ENST00000489406 ZMYM1Q5SVZ6 1142 aa17.36■□□□□ 0.37
UFD1-209ENST00000489406 NME8Q8N427 588 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms