RNA–Protein interactions for RNA: ENST00000489359.1

LIPA-208, Transcript of lipase A, lysosomal acid type, human

TSL 2

Gene LIPA, Length 461 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LIPA-208	ENST00000489359	PTPDC1	A2A3K4	754 aa		4.65	□□□□□ -1.67
LIPA-208	ENST00000489359	KCNQ2	O43526	872 aa		4.65	□□□□□ -1.67
LIPA-208	ENST00000489359	CUTA	O60888	179 aa		4.65	□□□□□ -1.67
LIPA-208	ENST00000489359	HIP1R	O75146	1068 aa		4.65	□□□□□ -1.67
LIPA-208	ENST00000489359	SLC9A1	P19634	815 aa		4.65	□□□□□ -1.67
LIPA-208	ENST00000489359	SDHA	P31040	664 aa		4.65	□□□□□ -1.67
LIPA-208	ENST00000489359	MSX2	P35548	267 aa	Predicted RBP	4.65	□□□□□ -1.67
LIPA-208	ENST00000489359	SLC6A3	Q01959	620 aa		4.65	□□□□□ -1.67
LIPA-208	ENST00000489359	ALDH6A1	Q02252	535 aa	Known RBP	4.65	□□□□□ -1.67
LIPA-208	ENST00000489359	KLF10	Q13118	480 aa		4.65	□□□□□ -1.67
LIPA-208	ENST00000489359	ZNF568	Q3ZCX4	644 aa		4.65	□□□□□ -1.67
LIPA-208	ENST00000489359	GRAMD4	Q6IC98	578 aa		4.65	□□□□□ -1.67
LIPA-208	ENST00000489359	ESRP1	Q6NXG1	681 aa	Known RBP	4.65	□□□□□ -1.67
LIPA-208	ENST00000489359	OTOP1	Q7RTM1	612 aa		4.65	□□□□□ -1.67
LIPA-208	ENST00000489359	BOC	Q9BWV1	1114 aa		4.65	□□□□□ -1.67
LIPA-208	ENST00000489359	KRTAP9-8	Q9BYQ0	159 aa		4.65	□□□□□ -1.67
LIPA-208	ENST00000489359	MS4A5	Q9H3V2	200 aa		4.65	□□□□□ -1.67
LIPA-208	ENST00000489359	HS3ST3A1	Q9Y663	406 aa		4.65	□□□□□ -1.67
LIPA-208	ENST00000489359	FAM83G	A6ND36	823 aa		4.64	□□□□□ -1.67
LIPA-208	ENST00000489359	ZNF891	A8MT65	544 aa	Predicted RBP	4.64	□□□□□ -1.67
LIPA-208	ENST00000489359	RAD17	O75943	681 aa		4.64	□□□□□ -1.67
LIPA-208	ENST00000489359	PRL	P01236	227 aa		4.64	□□□□□ -1.67
LIPA-208	ENST00000489359	C1S	P09871	688 aa		4.64	□□□□□ -1.67
LIPA-208	ENST00000489359	JMJD7	P0C870	316 aa		4.64	□□□□□ -1.67
LIPA-208	ENST00000489359	IGFALS	P35858	605 aa		4.64	□□□□□ -1.67
LIPA-208	ENST00000489359	ATP2C1	P98194	919 aa	Predicted RBP	4.64	□□□□□ -1.67
LIPA-208	ENST00000489359	HGFAC	Q04756	655 aa		4.64	□□□□□ -1.67
LIPA-208	ENST00000489359	PABPC4	Q13310	644 aa	Known RBP eCLIP	4.64	□□□□□ -1.67
LIPA-208	ENST00000489359	NRN1L	Q496H8	165 aa		4.64	□□□□□ -1.67
LIPA-208	ENST00000489359	USP39	Q53GS9	565 aa	Known RBP	4.64	□□□□□ -1.67
LIPA-208	ENST00000489359	ZMAT1	Q5H9K5	638 aa		4.64	□□□□□ -1.67
LIPA-208	ENST00000489359	ZC3H12B	Q5HYM0	836 aa	Known RBP	4.64	□□□□□ -1.67
LIPA-208	ENST00000489359	USP30	Q70CQ3	517 aa		4.64	□□□□□ -1.67
LIPA-208	ENST00000489359	CHST14	Q8NCH0	376 aa		4.64	□□□□□ -1.67
LIPA-208	ENST00000489359	SEMA4A	Q9H3S1	761 aa		4.64	□□□□□ -1.67
LIPA-208	ENST00000489359	ASB1	Q9Y576	335 aa		4.64	□□□□□ -1.67
LIPA-208	ENST00000489359	CD2AP	Q9Y5K6	639 aa		4.64	□□□□□ -1.67
LIPA-208	ENST00000489359	NPIPB8	E9PQR5	432 aa		4.63	□□□□□ -1.67
LIPA-208	ENST00000489359	KPNA6	O60684	536 aa		4.63	□□□□□ -1.67
LIPA-208	ENST00000489359	COMT	P21964	271 aa		4.63	□□□□□ -1.67
LIPA-208	ENST00000489359	MEOX1	P50221	254 aa		4.63	□□□□□ -1.67
LIPA-208	ENST00000489359	NFYC	Q13952	458 aa		4.63	□□□□□ -1.67
LIPA-208	ENST00000489359	MYBPC3	Q14896	1274 aa		4.63	□□□□□ -1.67
LIPA-208	ENST00000489359	PRAMEF9	Q5VWM5	478 aa		4.63	□□□□□ -1.67
LIPA-208	ENST00000489359	CDCA2	Q69YH5	1023 aa	Predicted RBP	4.63	□□□□□ -1.67
LIPA-208	ENST00000489359	NXPE1	Q8N323	547 aa		4.63	□□□□□ -1.67
LIPA-208	ENST00000489359	KIAA1958	Q8N8K9	716 aa		4.63	□□□□□ -1.67
LIPA-208	ENST00000489359	OR5AN1	Q8NGI8	311 aa		4.63	□□□□□ -1.67
LIPA-208	ENST00000489359	MRFAP1L1	Q96HT8	127 aa		4.63	□□□□□ -1.67
LIPA-208	ENST00000489359	SCYL1	Q96KG9	808 aa		4.63	□□□□□ -1.67
LIPA-208	ENST00000489359	RNPC3	Q96LT9	517 aa	Known RBP	4.63	□□□□□ -1.67
LIPA-208	ENST00000489359	ZNF341	Q9BYN7	854 aa		4.63	□□□□□ -1.67
LIPA-208	ENST00000489359	OR10A2	Q9H208	303 aa		4.63	□□□□□ -1.67
LIPA-208	ENST00000489359	PUF60	Q9UHX1	559 aa	Known RBP	4.63	□□□□□ -1.67
LIPA-208	ENST00000489359	DNAI1	Q9UI46	699 aa		4.63	□□□□□ -1.67
LIPA-208	ENST00000489359	C2orf78	A6NCI8	922 aa		4.62	□□□□□ -1.67
LIPA-208	ENST00000489359	CBX4	O00257	560 aa		4.62	□□□□□ -1.67
LIPA-208	ENST00000489359	HNRNPL	P14866	589 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
LIPA-208	ENST00000489359	APEX1	P27695	318 aa	Known RBP	4.62	□□□□□ -1.67
LIPA-208	ENST00000489359	RIN1	Q13671	783 aa		4.62	□□□□□ -1.67
LIPA-208	ENST00000489359	CC2D1A	Q6P1N0	951 aa	Predicted RBP	4.62	□□□□□ -1.67
LIPA-208	ENST00000489359	UNQ6494/PRO21346	Q6UXR6	183 aa		4.62	□□□□□ -1.67
LIPA-208	ENST00000489359	RNF207	Q6ZRF8	634 aa		4.62	□□□□□ -1.67
LIPA-208	ENST00000489359	CXXC5	Q7LFL8	322 aa	Known RBP	4.62	□□□□□ -1.67
LIPA-208	ENST00000489359	DDX53	Q86TM3	631 aa	Known RBP	4.62	□□□□□ -1.67
LIPA-208	ENST00000489359	IL17D	Q8TAD2	202 aa		4.62	□□□□□ -1.67
LIPA-208	ENST00000489359	WDR48	Q8TAF3	677 aa		4.62	□□□□□ -1.67
LIPA-208	ENST00000489359	RTF1	Q92541	710 aa	Known RBP	4.62	□□□□□ -1.67
LIPA-208	ENST00000489359	RPL10L	Q96L21	214 aa	Known RBP	4.62	□□□□□ -1.67
LIPA-208	ENST00000489359	ELF4	Q99607	663 aa	Predicted RBP	4.62	□□□□□ -1.67
LIPA-208	ENST00000489359	TLR9	Q9NR96	1032 aa		4.62	□□□□□ -1.67
LIPA-208	ENST00000489359	RBM8A	Q9Y5S9	174 aa	Known RBP	4.62	□□□□□ -1.67
LIPA-208	ENST00000489359	APOL3	O95236	402 aa		4.61	□□□□□ -1.67
LIPA-208	ENST00000489359	ASL	P04424	464 aa		4.61	□□□□□ -1.67
LIPA-208	ENST00000489359	ATP2A2	P16615	1042 aa	Known RBP	4.61	□□□□□ -1.67
LIPA-208	ENST00000489359	ADAM8	P78325	824 aa		4.61	□□□□□ -1.67
LIPA-208	ENST00000489359	PRKD1	Q15139	912 aa	Predicted RBP	4.61	□□□□□ -1.67
LIPA-208	ENST00000489359	FNDC3B	Q53EP0	1204 aa	Known RBP	4.61	□□□□□ -1.67
LIPA-208	ENST00000489359	SOGA3	Q5TF21	947 aa		4.61	□□□□□ -1.67
LIPA-208	ENST00000489359	SPTY2D1	Q68D10	685 aa	Predicted RBP	4.61	□□□□□ -1.67
LIPA-208	ENST00000489359	SLFN12L	Q6IEE8	588 aa		4.61	□□□□□ -1.67
LIPA-208	ENST00000489359	MAMDC4	Q6UXC1	1216 aa		4.61	□□□□□ -1.67
LIPA-208	ENST00000489359	SHCBP1	Q8NEM2	672 aa		4.61	□□□□□ -1.67
LIPA-208	ENST00000489359	CDK5RAP1	Q96SZ6	601 aa	Known RBP	4.61	□□□□□ -1.67
LIPA-208	ENST00000489359	GPHA2	Q96T91	129 aa		4.61	□□□□□ -1.67
LIPA-208	ENST00000489359	FOXB1	Q99853	325 aa		4.61	□□□□□ -1.67
LIPA-208	ENST00000489359	POFUT1	Q9H488	388 aa		4.61	□□□□□ -1.67
LIPA-208	ENST00000489359	PCIF1	Q9H4Z3	704 aa		4.61	□□□□□ -1.67
LIPA-208	ENST00000489359	TMEM260	Q9NX78	707 aa		4.61	□□□□□ -1.67
LIPA-208	ENST00000489359	PLA2G3	Q9NZ20	509 aa		4.61	□□□□□ -1.67
LIPA-208	ENST00000489359	FBXO10	Q9UK96	956 aa		4.61	□□□□□ -1.67
LIPA-208	ENST00000489359	CTDP1	Q9Y5B0	961 aa	Predicted RBP	4.61	□□□□□ -1.67
LIPA-208	ENST00000489359	SLC30A1	Q9Y6M5	507 aa		4.61	□□□□□ -1.67
LIPA-208	ENST00000489359	UBA6	A0AVT1	1052 aa	Predicted RBP	4.6	□□□□□ -1.67
LIPA-208	ENST00000489359	SLC26A4	O43511	780 aa		4.6	□□□□□ -1.67
LIPA-208	ENST00000489359	ACVRL1	P37023	503 aa		4.6	□□□□□ -1.67
LIPA-208	ENST00000489359	PCBP1	Q15365	356 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
LIPA-208	ENST00000489359	NFE2L2	Q16236	605 aa		4.6	□□□□□ -1.67
LIPA-208	ENST00000489359	POLN	Q7Z5Q5	900 aa		4.6	□□□□□ -1.67
LIPA-208	ENST00000489359	C16orf92	Q96LL3	132 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms