RNA–Protein interactions for RNA: ENST00000489318.1

C9orf3-220, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-220ENST00000489318 MRFAP1L1Q96HT8 127 aa12.71□□□□□ -0.37
C9orf3-220ENST00000489318 CEP170P1Q96L14 293 aa12.71□□□□□ -0.37
C9orf3-220ENST00000489318 KCTD10Q9H3F6 313 aa12.71□□□□□ -0.37
C9orf3-220ENST00000489318 SEMA6BQ9H3T3 888 aa12.71□□□□□ -0.37
C9orf3-220ENST00000489318 SMARCAD1Q9H4L7 1026 aa12.71□□□□□ -0.37
C9orf3-220ENST00000489318 ATP6V0A4Q9HBG4 840 aa12.71□□□□□ -0.37
C9orf3-220ENST00000489318 LARSQ9P2J5 1176 aaKnown RBP12.71□□□□□ -0.37
C9orf3-220ENST00000489318 GABRQQ9UN88 632 aa12.71□□□□□ -0.37
C9orf3-220ENST00000489318 MAPK8IP1Q9UQF2 711 aa12.71□□□□□ -0.37
C9orf3-220ENST00000489318 ZMYM2Q9UBW7 1377 aa12.7□□□□□ -0.38
C9orf3-220ENST00000489318 A6NJR5 290 aa12.7□□□□□ -0.38
C9orf3-220ENST00000489318 PPFIA4O75335 1185 aa12.7□□□□□ -0.38
C9orf3-220ENST00000489318 MMP3P08254 477 aa12.7□□□□□ -0.38
C9orf3-220ENST00000489318 ATP1A3P13637 1013 aa12.7□□□□□ -0.38
C9orf3-220ENST00000489318 PLS3P13797 630 aa12.7□□□□□ -0.38
C9orf3-220ENST00000489318 PTGS1P23219 599 aa12.7□□□□□ -0.38
C9orf3-220ENST00000489318 CYP2C19P33261 490 aa12.7□□□□□ -0.38
C9orf3-220ENST00000489318 FLT3LGP49771 235 aa12.7□□□□□ -0.38
C9orf3-220ENST00000489318 CASP5P51878 434 aa12.7□□□□□ -0.38
C9orf3-220ENST00000489318 NCKAP1LP55160 1127 aa12.7□□□□□ -0.38
C9orf3-220ENST00000489318 STX17P56962 302 aa12.7□□□□□ -0.38
C9orf3-220ENST00000489318 PRKCZQ05513 592 aa12.7□□□□□ -0.38
C9orf3-220ENST00000489318 KIF22Q14807 665 aa12.7□□□□□ -0.38
C9orf3-220ENST00000489318 EMC2Q15006 297 aa12.7□□□□□ -0.38
C9orf3-220ENST00000489318 PLCB4Q15147 1175 aa12.7□□□□□ -0.38
C9orf3-220ENST00000489318 PPP4R3CPQ6ZMV5 832 aa12.7□□□□□ -0.38
C9orf3-220ENST00000489318 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.7□□□□□ -0.38
C9orf3-220ENST00000489318 TRIM50Q86XT4 487 aa12.7□□□□□ -0.38
C9orf3-220ENST00000489318 SLC17A8Q8NDX2 589 aa12.7□□□□□ -0.38
C9orf3-220ENST00000489318 ZNF507Q8TCN5 953 aa12.7□□□□□ -0.38
C9orf3-220ENST00000489318 KIFAP3Q92845 792 aa12.7□□□□□ -0.38
C9orf3-220ENST00000489318 DUSP9Q99956 384 aaKnown RBP12.7□□□□□ -0.38
C9orf3-220ENST00000489318 THAP9Q9H5L6 903 aa12.7□□□□□ -0.38
C9orf3-220ENST00000489318 SAMSN1Q9NSI8 373 aaKnown RBP12.7□□□□□ -0.38
C9orf3-220ENST00000489318 NRBP2Q9NSY0 501 aa12.7□□□□□ -0.38
C9orf3-220ENST00000489318 ERAP1Q9NZ08 941 aa12.7□□□□□ -0.38
C9orf3-220ENST00000489318 COL1A2P08123 1366 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 IGKV6-21A0A0C4DH24 114 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 ZBTB42B2RXF5 422 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 GPR25O00155 361 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 GAS2O43903 313 aaKnown RBP12.69□□□□□ -0.38
C9orf3-220ENST00000489318 MAFO75444 373 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-220ENST00000489318 TRPA1O75762 1119 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 ADCY5O95622 1261 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 AKR1A1P14550 325 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 CDC25BP30305 580 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 HOXD13P35453 343 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 ZNF75DP51815 510 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 NKX3-2P78367 333 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 SPAG1Q07617 926 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 LRRC41Q15345 812 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 NFIL3Q16649 462 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 EDRF1Q3B7T1 1238 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 MTERF2Q49AM1 385 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 ODR4Q5SWX8 454 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 ANKRD40Q6AI12 368 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 LRRC55Q6ZSA7 311 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 APTXQ7Z2E3 356 aaKnown RBP12.69□□□□□ -0.38
C9orf3-220ENST00000489318 ZNF720Q7Z2F6 126 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 TLK2Q86UE8 772 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 FAM178BQ8IXR5 827 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 MYCT1Q8N699 235 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 OR6J1Q8NGC5 347 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 AFG1LQ8WV93 481 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 SPIRE2Q8WWL2 714 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 GLG1Q92896 1179 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 SH2D3AQ9BRG2 576 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 C16orf70Q9BSU1 422 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 ZHX3Q9H4I2 956 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 MRPL44Q9H9J2 332 aaKnown RBP12.69□□□□□ -0.38
C9orf3-220ENST00000489318 TBC1D7Q9P0N9 293 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 SRRDQ9UH36 339 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 TRAF3IP3Q9Y228 551 aa12.69□□□□□ -0.38
C9orf3-220ENST00000489318 PDXKO00764 312 aa12.68□□□□□ -0.38
C9orf3-220ENST00000489318 HBP1O60381 514 aa12.68□□□□□ -0.38
C9orf3-220ENST00000489318 ECM2O94769 699 aaPredicted RBP12.68□□□□□ -0.38
C9orf3-220ENST00000489318 MYBP10242 640 aa12.68□□□□□ -0.38
C9orf3-220ENST00000489318 SCP2P22307 547 aa12.68□□□□□ -0.38
C9orf3-220ENST00000489318 EEF1GP26641 437 aaKnown RBP12.68□□□□□ -0.38
C9orf3-220ENST00000489318 POLGP54098 1239 aaPredicted RBP12.68□□□□□ -0.38
C9orf3-220ENST00000489318 HTRA3P83110 453 aa12.68□□□□□ -0.38
C9orf3-220ENST00000489318 FANCCQ00597 558 aa12.68□□□□□ -0.38
C9orf3-220ENST00000489318 PRAMEF19Q5SWL8 479 aa12.68□□□□□ -0.38
C9orf3-220ENST00000489318 MFSD14CQ5VZR4 134 aa12.68□□□□□ -0.38
C9orf3-220ENST00000489318 STXBP4Q6ZWJ1 553 aa12.68□□□□□ -0.38
C9orf3-220ENST00000489318 IRF2BP1Q8IU81 584 aa12.68□□□□□ -0.38
C9orf3-220ENST00000489318 EXOC8Q8IYI6 725 aa12.68□□□□□ -0.38
C9orf3-220ENST00000489318 TRPV1Q8NER1 839 aa12.68□□□□□ -0.38
C9orf3-220ENST00000489318 TMEM174Q8WUU8 243 aa12.68□□□□□ -0.38
C9orf3-220ENST00000489318 SLC7A3Q8WY07 619 aa12.68□□□□□ -0.38
C9orf3-220ENST00000489318 HVCN1Q96D96 273 aa12.68□□□□□ -0.38
C9orf3-220ENST00000489318 NTPCRQ9BSD7 190 aaKnown RBP12.68□□□□□ -0.38
C9orf3-220ENST00000489318 GPRC5CQ9NQ84 441 aa12.68□□□□□ -0.38
C9orf3-220ENST00000489318 TYW1Q9NV66 732 aaKnown RBP12.68□□□□□ -0.38
C9orf3-220ENST00000489318 LIMA1Q9UHB6 759 aaKnown RBP12.68□□□□□ -0.38
C9orf3-220ENST00000489318 ZNF215Q9UL58 517 aaPredicted RBP12.68□□□□□ -0.38
C9orf3-220ENST00000489318 FAM184BQ9ULE4 1060 aa12.68□□□□□ -0.38
C9orf3-220ENST00000489318 LRRC10BA6NIK2 292 aa12.67□□□□□ -0.38
C9orf3-220ENST00000489318 SFI1A8K8P3 1242 aa12.67□□□□□ -0.38
C9orf3-220ENST00000489318 GCNT3O95395 438 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms