RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 AKT3Q9Y243 479 aa25.93■■□□□ 1.74
COL9A3-213ENST00000489045 FNDC1Q4ZHG4 1894 aaPredicted RBP25.93■■□□□ 1.74
COL9A3-213ENST00000489045 MGEA5O60502 916 aa25.92■■□□□ 1.74
COL9A3-213ENST00000489045 STAG3L1P0CL83 205 aa25.92■■□□□ 1.74
COL9A3-213ENST00000489045 BMP1P13497 986 aa25.92■■□□□ 1.74
COL9A3-213ENST00000489045 EFCAB12Q6NXP0 572 aa25.92■■□□□ 1.74
COL9A3-213ENST00000489045 NEK8Q86SG6 692 aa25.92■■□□□ 1.74
COL9A3-213ENST00000489045 LRRC71Q8N4P6 559 aa25.92■■□□□ 1.74
COL9A3-213ENST00000489045 LINC01465Q8N7H1 131 aa25.92■■□□□ 1.74
COL9A3-213ENST00000489045 WASF1Q92558 559 aa25.92■■□□□ 1.74
COL9A3-213ENST00000489045 CLP1Q92989 425 aaKnown RBP25.92■■□□□ 1.74
COL9A3-213ENST00000489045 UHRF1Q96T88 793 aaPredicted RBP25.92■■□□□ 1.74
COL9A3-213ENST00000489045 RWDD3Q9Y3V2 267 aa25.92■■□□□ 1.74
COL9A3-213ENST00000489045 C5orf67F2Z3F1 127 aa25.91■■□□□ 1.74
COL9A3-213ENST00000489045 TNFRSF10AO00220 468 aa25.91■■□□□ 1.74
COL9A3-213ENST00000489045 FDPSP14324 419 aaKnown RBP25.91■■□□□ 1.74
COL9A3-213ENST00000489045 IBSPP21815 317 aaPredicted RBP25.91■■□□□ 1.74
COL9A3-213ENST00000489045 BMPR1AP36894 532 aa25.91■■□□□ 1.74
COL9A3-213ENST00000489045 NEK4P51957 841 aa25.91■■□□□ 1.74
COL9A3-213ENST00000489045 ODR4Q5SWX8 454 aa25.91■■□□□ 1.74
COL9A3-213ENST00000489045 PIK3AP1Q6ZUJ8 805 aa25.91■■□□□ 1.74
COL9A3-213ENST00000489045 FAM228AQ86W67 206 aa25.91■■□□□ 1.74
COL9A3-213ENST00000489045 MAP7D2Q96T17 732 aa25.91■■□□□ 1.74
COL9A3-213ENST00000489045 ST3GAL5Q9UNP4 418 aa25.91■■□□□ 1.74
COL9A3-213ENST00000489045 GPR182O15218 404 aa25.9■■□□□ 1.74
COL9A3-213ENST00000489045 TMOD1P28289 359 aa25.9■■□□□ 1.74
COL9A3-213ENST00000489045 SARSP49591 514 aaKnown RBP25.9■■□□□ 1.74
COL9A3-213ENST00000489045 TIGD5Q53EQ6 642 aa25.9■■□□□ 1.74
COL9A3-213ENST00000489045 CMTR2Q8IYT2 770 aaKnown RBP25.9■■□□□ 1.74
COL9A3-213ENST00000489045 SEPT9Q9UHD8 586 aaPredicted RBP25.9■■□□□ 1.74
COL9A3-213ENST00000489045 LRFN2Q9ULH4 789 aa25.9■■□□□ 1.74
COL9A3-213ENST00000489045 MUC3AQ02505 3323 aa25.9■■□□□ 1.74
COL9A3-213ENST00000489045 MYO7AQ13402 2215 aa25.9■■□□□ 1.74
COL9A3-213ENST00000489045 DENND3A2RUS2 1198 aa25.89■■□□□ 1.74
COL9A3-213ENST00000489045 RB1P06400 928 aa25.89■■□□□ 1.74
COL9A3-213ENST00000489045 GCFC2P16383 781 aaKnown RBP25.89■■□□□ 1.74
COL9A3-213ENST00000489045 NLRP11P59045 1033 aaKnown RBP25.89■■□□□ 1.74
COL9A3-213ENST00000489045 TBC1D8BQ0IIM8 1120 aa25.89■■□□□ 1.74
COL9A3-213ENST00000489045 PAN2Q504Q3 1202 aaKnown RBP25.89■■□□□ 1.74
COL9A3-213ENST00000489045 PPP4R3AQ6IN85 833 aa25.89■■□□□ 1.74
COL9A3-213ENST00000489045 FAM43BQ6ZT52 329 aaPredicted RBP25.89■■□□□ 1.74
COL9A3-213ENST00000489045 NSUN7Q8NE18 718 aaKnown RBP25.89■■□□□ 1.74
COL9A3-213ENST00000489045 ADAM2Q99965 735 aa25.89■■□□□ 1.74
COL9A3-213ENST00000489045 C11orf84Q9BUA3 381 aaPredicted RBP25.89■■□□□ 1.74
COL9A3-213ENST00000489045 MRPL42Q9Y6G3 142 aaKnown RBP25.89■■□□□ 1.74
COL9A3-213ENST00000489045 TMEM150BA6NC51 233 aa25.88■■□□□ 1.73
COL9A3-213ENST00000489045 CCNT1O60563 726 aaKnown RBP25.88■■□□□ 1.73
COL9A3-213ENST00000489045 GATMP50440 423 aa25.88■■□□□ 1.73
COL9A3-213ENST00000489045 TARBP2Q15633 366 aaKnown RBP25.88■■□□□ 1.73
COL9A3-213ENST00000489045 XKR3Q5GH77 459 aa25.88■■□□□ 1.73
COL9A3-213ENST00000489045 EARS2Q5JPH6 523 aaKnown RBP25.88■■□□□ 1.73
COL9A3-213ENST00000489045 BANK1Q8NDB2 785 aa25.88■■□□□ 1.73
COL9A3-213ENST00000489045 NECAB3Q96P71 396 aaPredicted RBP25.88■■□□□ 1.73
COL9A3-213ENST00000489045 ADAMTS10Q9H324 1103 aa25.88■■□□□ 1.73
COL9A3-213ENST00000489045 UBE2ZQ9H832 354 aaPredicted RBP25.88■■□□□ 1.73
COL9A3-213ENST00000489045 KCNMB3Q9NPA1 279 aa25.88■■□□□ 1.73
COL9A3-213ENST00000489045 RGS18Q9NS28 235 aa25.88■■□□□ 1.73
COL9A3-213ENST00000489045 C1orf112Q9NSG2 853 aa25.88■■□□□ 1.73
COL9A3-213ENST00000489045 FAM205CA6NFA0 338 aa25.87■■□□□ 1.73
COL9A3-213ENST00000489045 STBD1O95210 358 aa25.87■■□□□ 1.73
COL9A3-213ENST00000489045 KRT2P35908 639 aa25.87■■□□□ 1.73
COL9A3-213ENST00000489045 NR5A1Q13285 461 aa25.87■■□□□ 1.73
COL9A3-213ENST00000489045 MTERF2Q49AM1 385 aa25.87■■□□□ 1.73
COL9A3-213ENST00000489045 ZNF668Q96K58 619 aaPredicted RBP25.87■■□□□ 1.73
COL9A3-213ENST00000489045 FAM20AQ96MK3 541 aa25.87■■□□□ 1.73
COL9A3-213ENST00000489045 NIFKQ9BYG3 293 aaKnown RBP25.87■■□□□ 1.73
COL9A3-213ENST00000489045 VAV3Q9UKW4 847 aa25.87■■□□□ 1.73
COL9A3-213ENST00000489045 PLXNA4Q9HCM2 1894 aa25.86■■□□□ 1.73
COL9A3-213ENST00000489045 C9IYK1 514 aa25.86■■□□□ 1.73
COL9A3-213ENST00000489045 EML1O00423 815 aa25.86■■□□□ 1.73
COL9A3-213ENST00000489045 GRM6O15303 877 aa25.86■■□□□ 1.73
COL9A3-213ENST00000489045 JAK2O60674 1132 aa25.86■■□□□ 1.73
COL9A3-213ENST00000489045 PPP2R5CQ13362 524 aa25.86■■□□□ 1.73
COL9A3-213ENST00000489045 SLC24A5Q71RS6 500 aa25.86■■□□□ 1.73
COL9A3-213ENST00000489045 NAP1L4Q99733 375 aaKnown RBP25.86■■□□□ 1.73
COL9A3-213ENST00000489045 SH2D3AQ9BRG2 576 aa25.86■■□□□ 1.73
COL9A3-213ENST00000489045 NSUN3Q9H649 340 aaKnown RBP25.86■■□□□ 1.73
COL9A3-213ENST00000489045 BRMS1Q9HCU9 246 aa25.86■■□□□ 1.73
COL9A3-213ENST00000489045 PCDHB7Q9Y5E2 793 aa25.86■■□□□ 1.73
COL9A3-213ENST00000489045 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.85■■□□□ 1.73
COL9A3-213ENST00000489045 GPC3P51654 580 aa25.85■■□□□ 1.73
COL9A3-213ENST00000489045 PSMC5P62195 406 aa25.85■■□□□ 1.73
COL9A3-213ENST00000489045 TCEAL5Q5H9L2 206 aa25.85■■□□□ 1.73
COL9A3-213ENST00000489045 POTEDQ86YR6 584 aa25.85■■□□□ 1.73
COL9A3-213ENST00000489045 ZNF710Q8N1W2 664 aa25.85■■□□□ 1.73
COL9A3-213ENST00000489045 TNFRSF25Q93038 417 aa25.85■■□□□ 1.73
COL9A3-213ENST00000489045 SCLT1Q96NL6 688 aa25.85■■□□□ 1.73
COL9A3-213ENST00000489045 CEP89Q96ST8 783 aa25.85■■□□□ 1.73
COL9A3-213ENST00000489045 PLVAPQ9BX97 442 aa25.85■■□□□ 1.73
COL9A3-213ENST00000489045 LMAN2LQ9H0V9 348 aa25.85■■□□□ 1.73
COL9A3-213ENST00000489045 ARID2Q68CP9 1835 aa25.85■■□□□ 1.73
COL9A3-213ENST00000489045 DDX11L8A8MPP1 907 aa25.84■■□□□ 1.73
COL9A3-213ENST00000489045 EIF4BP23588 611 aaKnown RBP25.84■■□□□ 1.73
COL9A3-213ENST00000489045 FOSBP53539 338 aa25.84■■□□□ 1.73
COL9A3-213ENST00000489045 ST3GAL1Q11201 340 aa25.84■■□□□ 1.73
COL9A3-213ENST00000489045 DRP2Q13474 957 aa25.84■■□□□ 1.73
COL9A3-213ENST00000489045 DSC3Q14574 896 aa25.84■■□□□ 1.73
COL9A3-213ENST00000489045 HAS1Q92839 578 aa25.84■■□□□ 1.73
COL9A3-213ENST00000489045 RNF216Q9NWF9 866 aaPredicted RBP25.84■■□□□ 1.73
COL9A3-213ENST00000489045 TBX3O15119 743 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms