RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 KAT6AQ92794 2004 aa12.54□□□□□ -0.4
ARHGEF39-204ENST00000488918 TANC1Q9C0D5 1861 aa12.53□□□□□ -0.4
ARHGEF39-204ENST00000488918 ZNF862O60290 1169 aa12.53□□□□□ -0.4
ARHGEF39-204ENST00000488918 OR52Z1P0C646 297 aa12.53□□□□□ -0.4
ARHGEF39-204ENST00000488918 YWHABP31946 246 aaKnown RBP12.53□□□□□ -0.4
ARHGEF39-204ENST00000488918 RFC5P40937 340 aa12.53□□□□□ -0.4
ARHGEF39-204ENST00000488918 NCBP1Q09161 790 aaKnown RBP12.53□□□□□ -0.4
ARHGEF39-204ENST00000488918 MGAT3Q09327 533 aa12.53□□□□□ -0.4
ARHGEF39-204ENST00000488918 CTTNQ14247 550 aaKnown RBP12.53□□□□□ -0.4
ARHGEF39-204ENST00000488918 SKIV2LQ15477 1246 aaKnown RBP12.53□□□□□ -0.4
ARHGEF39-204ENST00000488918 XKR9Q5GH70 373 aa12.53□□□□□ -0.4
ARHGEF39-204ENST00000488918 LARP1BQ659C4 914 aaKnown RBP12.53□□□□□ -0.4
ARHGEF39-204ENST00000488918 HAUS3Q68CZ6 603 aa12.53□□□□□ -0.4
ARHGEF39-204ENST00000488918 TMCO2Q7Z6W1 182 aaPredicted RBP12.53□□□□□ -0.4
ARHGEF39-204ENST00000488918 FIBCD1Q8N539 461 aa12.53□□□□□ -0.4
ARHGEF39-204ENST00000488918 TCP11Q8WWU5 503 aa12.53□□□□□ -0.4
ARHGEF39-204ENST00000488918 TNFRSF25Q93038 417 aa12.53□□□□□ -0.4
ARHGEF39-204ENST00000488918 TOP1MTQ969P6 601 aa12.53□□□□□ -0.4
ARHGEF39-204ENST00000488918 VWCEQ96DN2 955 aa12.53□□□□□ -0.4
ARHGEF39-204ENST00000488918 DYDC2Q96IM9 177 aa12.53□□□□□ -0.4
ARHGEF39-204ENST00000488918 OSMRQ99650 979 aa12.53□□□□□ -0.4
ARHGEF39-204ENST00000488918 BACH2Q9BYV9 841 aa12.53□□□□□ -0.4
ARHGEF39-204ENST00000488918 CYP26B1Q9NR63 512 aa12.53□□□□□ -0.4
ARHGEF39-204ENST00000488918 C1orf112Q9NSG2 853 aa12.53□□□□□ -0.4
ARHGEF39-204ENST00000488918 VAV3Q9UKW4 847 aa12.53□□□□□ -0.4
ARHGEF39-204ENST00000488918 STK24Q9Y6E0 443 aa12.53□□□□□ -0.4
ARHGEF39-204ENST00000488918 KDM3AQ9Y4C1 1321 aa12.53□□□□□ -0.4
ARHGEF39-204ENST00000488918 EML1O00423 815 aa12.52□□□□□ -0.41
ARHGEF39-204ENST00000488918 ENPP3O14638 875 aa12.52□□□□□ -0.41
ARHGEF39-204ENST00000488918 EDIL3O43854 480 aa12.52□□□□□ -0.41
ARHGEF39-204ENST00000488918 GAS2O43903 313 aaKnown RBP12.52□□□□□ -0.41
ARHGEF39-204ENST00000488918 SFPQP23246 707 aaKnown RBP eCLIP12.52□□□□□ -0.41
ARHGEF39-204ENST00000488918 TECP42680 631 aa12.52□□□□□ -0.41
ARHGEF39-204ENST00000488918 TAP1Q03518 808 aa12.52□□□□□ -0.41
ARHGEF39-204ENST00000488918 ST3GAL1Q11201 340 aa12.52□□□□□ -0.41
ARHGEF39-204ENST00000488918 BTG3Q14201 252 aaPredicted RBP12.52□□□□□ -0.41
ARHGEF39-204ENST00000488918 SPOUT1Q5T280 376 aaKnown RBP12.52□□□□□ -0.41
ARHGEF39-204ENST00000488918 PLA2G4FQ68DD2 849 aa12.52□□□□□ -0.41
ARHGEF39-204ENST00000488918 RHPN2Q8IUC4 686 aa12.52□□□□□ -0.41
ARHGEF39-204ENST00000488918 C4orf19Q8IY42 314 aa12.52□□□□□ -0.41
ARHGEF39-204ENST00000488918 PSPC1Q8WXF1 523 aaKnown RBP12.52□□□□□ -0.41
ARHGEF39-204ENST00000488918 HAS1Q92839 578 aa12.52□□□□□ -0.41
ARHGEF39-204ENST00000488918 SAMD11Q96NU1 681 aa12.52□□□□□ -0.41
ARHGEF39-204ENST00000488918 EIF2AK1Q9BQI3 630 aaKnown RBP12.52□□□□□ -0.41
ARHGEF39-204ENST00000488918 SUCLA2Q9P2R7 463 aaPredicted RBP12.52□□□□□ -0.41
ARHGEF39-204ENST00000488918 RWDD3Q9Y3V2 267 aa12.52□□□□□ -0.41
ARHGEF39-204ENST00000488918 TRIP12Q14669 1992 aaPredicted RBP12.51□□□□□ -0.41
ARHGEF39-204ENST00000488918 ZBTB42B2RXF5 422 aa12.51□□□□□ -0.41
ARHGEF39-204ENST00000488918 LAD1O00515 517 aa12.51□□□□□ -0.41
ARHGEF39-204ENST00000488918 EIF4BP23588 611 aaKnown RBP12.51□□□□□ -0.41
ARHGEF39-204ENST00000488918 TFDP1Q14186 410 aa12.51□□□□□ -0.41
ARHGEF39-204ENST00000488918 PTPROQ16827 1216 aa12.51□□□□□ -0.41
ARHGEF39-204ENST00000488918 RILPL1Q5EBL4 403 aa12.51□□□□□ -0.41
ARHGEF39-204ENST00000488918 NPAS4Q8IUM7 802 aa12.51□□□□□ -0.41
ARHGEF39-204ENST00000488918 ABI1Q8IZP0 508 aa12.51□□□□□ -0.41
ARHGEF39-204ENST00000488918 PIAS4Q8N2W9 510 aaPredicted RBP12.51□□□□□ -0.41
ARHGEF39-204ENST00000488918 FBXO22Q8NEZ5 403 aa12.51□□□□□ -0.41
ARHGEF39-204ENST00000488918 NLRP4Q96MN2 994 aa12.51□□□□□ -0.41
ARHGEF39-204ENST00000488918 ADAM2Q99965 735 aa12.51□□□□□ -0.41
ARHGEF39-204ENST00000488918 SH2D3AQ9BRG2 576 aa12.51□□□□□ -0.41
ARHGEF39-204ENST00000488918 DACT1Q9NYF0 836 aa12.51□□□□□ -0.41
ARHGEF39-204ENST00000488918 RGL1Q9NZL6 768 aa12.51□□□□□ -0.41
ARHGEF39-204ENST00000488918 ST3GAL5Q9UNP4 418 aa12.51□□□□□ -0.41
ARHGEF39-204ENST00000488918 NOC2LQ9Y3T9 749 aaKnown RBP12.51□□□□□ -0.41
ARHGEF39-204ENST00000488918 SCN5AQ14524 2016 aa12.5□□□□□ -0.41
ARHGEF39-204ENST00000488918 VPS37CA5D8V6 355 aaPredicted RBP12.5□□□□□ -0.41
ARHGEF39-204ENST00000488918 ASAP2O43150 1006 aa12.5□□□□□ -0.41
ARHGEF39-204ENST00000488918 HOXA2O43364 376 aa12.5□□□□□ -0.41
ARHGEF39-204ENST00000488918 MAFO75444 373 aaPredicted RBP12.5□□□□□ -0.41
ARHGEF39-204ENST00000488918 U2AF2P26368 475 aaKnown RBP eCLIP12.5□□□□□ -0.41
ARHGEF39-204ENST00000488918 CCDC85BQ15834 202 aaPredicted RBP12.5□□□□□ -0.41
ARHGEF39-204ENST00000488918 TCTN1Q2MV58 587 aa12.5□□□□□ -0.41
ARHGEF39-204ENST00000488918 B3GNT9Q6UX72 402 aa12.5□□□□□ -0.41
ARHGEF39-204ENST00000488918 SLC24A5Q71RS6 500 aa12.5□□□□□ -0.41
ARHGEF39-204ENST00000488918 ANO5Q75V66 913 aa12.5□□□□□ -0.41
ARHGEF39-204ENST00000488918 ZNF410Q86VK4 478 aa12.5□□□□□ -0.41
ARHGEF39-204ENST00000488918 HSCBQ8IWL3 235 aa12.5□□□□□ -0.41
ARHGEF39-204ENST00000488918 RNF169Q8NCN4 708 aa12.5□□□□□ -0.41
ARHGEF39-204ENST00000488918 ZNF668Q96K58 619 aaPredicted RBP12.5□□□□□ -0.41
ARHGEF39-204ENST00000488918 MTRQ99707 1265 aa12.5□□□□□ -0.41
ARHGEF39-204ENST00000488918 AGO3Q9H9G7 860 aaKnown RBP12.5□□□□□ -0.41
ARHGEF39-204ENST00000488918 ATP6V0A4Q9HBG4 840 aa12.5□□□□□ -0.41
ARHGEF39-204ENST00000488918 BMP2KQ9NSY1 1161 aaPredicted RBP12.5□□□□□ -0.41
ARHGEF39-204ENST00000488918 LRWD1Q9UFC0 647 aa12.5□□□□□ -0.41
ARHGEF39-204ENST00000488918 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.49□□□□□ -0.41
ARHGEF39-204ENST00000488918 LINC01553A4QN01 128 aa12.49□□□□□ -0.41
ARHGEF39-204ENST00000488918 TMEM150BA6NC51 233 aa12.49□□□□□ -0.41
ARHGEF39-204ENST00000488918 POTEMA6NI47 508 aa12.49□□□□□ -0.41
ARHGEF39-204ENST00000488918 GPR32O75388 356 aa12.49□□□□□ -0.41
ARHGEF39-204ENST00000488918 DGAT1O75907 488 aa12.49□□□□□ -0.41
ARHGEF39-204ENST00000488918 SRGAP2CP0DJJ0 459 aa12.49□□□□□ -0.41
ARHGEF39-204ENST00000488918 SKIP12755 728 aa12.49□□□□□ -0.41
ARHGEF39-204ENST00000488918 CCT6AP40227 531 aaKnown RBP12.49□□□□□ -0.41
ARHGEF39-204ENST00000488918 PHKA2P46019 1235 aa12.49□□□□□ -0.41
ARHGEF39-204ENST00000488918 SARSP49591 514 aaKnown RBP12.49□□□□□ -0.41
ARHGEF39-204ENST00000488918 GPC3P51654 580 aa12.49□□□□□ -0.41
ARHGEF39-204ENST00000488918 NPEPPSP55786 919 aa12.49□□□□□ -0.41
ARHGEF39-204ENST00000488918 MXD4Q14582 209 aaPredicted RBP12.49□□□□□ -0.41
ARHGEF39-204ENST00000488918 EMC2Q15006 297 aa12.49□□□□□ -0.41
ARHGEF39-204ENST00000488918 TARBP2Q15633 366 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms