RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 MRGPREQ86SM8 312 aa4.58□□□□□ -1.68
CCDC93-209ENST00000488908 PCDH19Q8TAB3 1148 aa4.58□□□□□ -1.68
CCDC93-209ENST00000488908 HNRNPLLQ8WVV9 542 aaKnown RBP4.58□□□□□ -1.68
CCDC93-209ENST00000488908 CBLCQ9ULV8 474 aa4.58□□□□□ -1.68
CCDC93-209ENST00000488908 CTDP1Q9Y5B0 961 aaPredicted RBP4.58□□□□□ -1.68
CCDC93-209ENST00000488908 PCDHA8Q9Y5H6 950 aa4.58□□□□□ -1.68
CCDC93-209ENST00000488908 ZNF561-AS1K7EIQ3 104 aa4.57□□□□□ -1.68
CCDC93-209ENST00000488908 LMNAP02545 664 aaKnown RBP4.57□□□□□ -1.68
CCDC93-209ENST00000488908 MMEP08473 750 aa4.57□□□□□ -1.68
CCDC93-209ENST00000488908 FGRP09769 529 aa4.57□□□□□ -1.68
CCDC93-209ENST00000488908 SESN2P58004 480 aaPredicted RBP4.57□□□□□ -1.68
CCDC93-209ENST00000488908 ADAM15Q13444 863 aa4.57□□□□□ -1.68
CCDC93-209ENST00000488908 MBNL2Q5VZF2 373 aaKnown RBP4.57□□□□□ -1.68
CCDC93-209ENST00000488908 CALML6Q8TD86 181 aa4.57□□□□□ -1.68
CCDC93-209ENST00000488908 SLC25A43Q8WUT9 341 aaPredicted RBP4.57□□□□□ -1.68
CCDC93-209ENST00000488908 PTPRN2Q92932 1015 aa4.57□□□□□ -1.68
CCDC93-209ENST00000488908 SLC6A15Q9H2J7 730 aa4.57□□□□□ -1.68
CCDC93-209ENST00000488908 PTGFRNQ9P2B2 879 aa4.57□□□□□ -1.68
CCDC93-209ENST00000488908 ARVCFO00192 962 aa4.56□□□□□ -1.68
CCDC93-209ENST00000488908 KCNK3O14649 394 aa4.56□□□□□ -1.68
CCDC93-209ENST00000488908 H2AFYO75367 372 aaKnown RBP4.56□□□□□ -1.68
CCDC93-209ENST00000488908 MAFO75444 373 aaPredicted RBP4.56□□□□□ -1.68
CCDC93-209ENST00000488908 SRGAP2CP0DJJ0 459 aa4.56□□□□□ -1.68
CCDC93-209ENST00000488908 PROZP22891 400 aa4.56□□□□□ -1.68
CCDC93-209ENST00000488908 STAT3P40763 770 aa4.56□□□□□ -1.68
CCDC93-209ENST00000488908 ADCY7P51828 1080 aa4.56□□□□□ -1.68
CCDC93-209ENST00000488908 SMAD3P84022 425 aaKnown RBP4.56□□□□□ -1.68
CCDC93-209ENST00000488908 ATP2C1P98194 919 aaPredicted RBP4.56□□□□□ -1.68
CCDC93-209ENST00000488908 GUCY1A3Q02108 690 aa4.56□□□□□ -1.68
CCDC93-209ENST00000488908 ELAVL1Q15717 326 aaKnown RBP4.56□□□□□ -1.68
CCDC93-209ENST00000488908 KLHDC10Q6PID8 442 aa4.56□□□□□ -1.68
CCDC93-209ENST00000488908 SYNE4Q8N205 404 aa4.56□□□□□ -1.68
CCDC93-209ENST00000488908 HIPK4Q8NE63 616 aa4.56□□□□□ -1.68
CCDC93-209ENST00000488908 GPR150Q8NGU9 434 aa4.56□□□□□ -1.68
CCDC93-209ENST00000488908 ASB15Q8WXK1 588 aa4.56□□□□□ -1.68
CCDC93-209ENST00000488908 GPR87Q9BY21 358 aa4.56□□□□□ -1.68
CCDC93-209ENST00000488908 RIOX1Q9H6W3 641 aa4.56□□□□□ -1.68
CCDC93-209ENST00000488908 SMURF1Q9HCE7 757 aa4.56□□□□□ -1.68
CCDC93-209ENST00000488908 KIAA1522Q9P206 1035 aaPredicted RBP4.56□□□□□ -1.68
CCDC93-209ENST00000488908 PACSIN3Q9UKS6 424 aa4.56□□□□□ -1.68
CCDC93-209ENST00000488908 ASB1Q9Y576 335 aa4.56□□□□□ -1.68
CCDC93-209ENST00000488908 XDHP47989 1333 aa4.55□□□□□ -1.68
CCDC93-209ENST00000488908 ZBTB7CA1YPR0 619 aa4.55□□□□□ -1.68
CCDC93-209ENST00000488908 CCDC66A2RUB6 948 aa4.55□□□□□ -1.68
CCDC93-209ENST00000488908 PRAMEF22A3QJZ6 481 aa4.55□□□□□ -1.68
CCDC93-209ENST00000488908 FAM20BO75063 409 aa4.55□□□□□ -1.68
CCDC93-209ENST00000488908 APEX1P27695 318 aaKnown RBP4.55□□□□□ -1.68
CCDC93-209ENST00000488908 ERCC5P28715 1186 aaPredicted RBP4.55□□□□□ -1.68
CCDC93-209ENST00000488908 LACTBP83111 547 aaPredicted RBP4.55□□□□□ -1.68
CCDC93-209ENST00000488908 ARID5AQ03989 594 aa4.55□□□□□ -1.68
CCDC93-209ENST00000488908 FAM111BQ6SJ93 734 aa4.55□□□□□ -1.68
CCDC93-209ENST00000488908 ANKS3Q6ZW76 656 aa4.55□□□□□ -1.68
CCDC93-209ENST00000488908 GAREM2Q75VX8 874 aa4.55□□□□□ -1.68
CCDC93-209ENST00000488908 PRIMA1Q86XR5 153 aa4.55□□□□□ -1.68
CCDC93-209ENST00000488908 GFM2Q969S9 779 aaKnown RBP4.55□□□□□ -1.68
CCDC93-209ENST00000488908 LENG9Q96B70 501 aa4.55□□□□□ -1.68
CCDC93-209ENST00000488908 SLC7A6OSQ96CW6 309 aaPredicted RBP4.55□□□□□ -1.68
CCDC93-209ENST00000488908 ZNF764Q96H86 408 aaPredicted RBP4.55□□□□□ -1.68
CCDC93-209ENST00000488908 ZNHIT2Q9UHR6 403 aa4.55□□□□□ -1.68
CCDC93-209ENST00000488908 SCDO00767 359 aa4.54□□□□□ -1.68
CCDC93-209ENST00000488908 DNM2P50570 870 aa4.54□□□□□ -1.68
CCDC93-209ENST00000488908 PTPAQ15257 358 aa4.54□□□□□ -1.68
CCDC93-209ENST00000488908 SEC23AQ15436 765 aa4.54□□□□□ -1.68
CCDC93-209ENST00000488908 RABL3Q5HYI8 236 aa4.54□□□□□ -1.68
CCDC93-209ENST00000488908 ZC3H7AQ8IWR0 971 aaKnown RBP4.54□□□□□ -1.68
CCDC93-209ENST00000488908 BCL6BQ8N143 479 aaPredicted RBP4.54□□□□□ -1.68
CCDC93-209ENST00000488908 ZNF276Q8N554 614 aa4.54□□□□□ -1.68
CCDC93-209ENST00000488908 GCDHQ92947 438 aaPredicted RBP4.54□□□□□ -1.68
CCDC93-209ENST00000488908 ZNF669Q96BR6 464 aaPredicted RBP4.54□□□□□ -1.68
CCDC93-209ENST00000488908 GBP4Q96PP9 640 aa4.54□□□□□ -1.68
CCDC93-209ENST00000488908 KCNH7Q9NS40 1196 aa4.54□□□□□ -1.68
CCDC93-209ENST00000488908 GOLGA8BA8MQT2 603 aa4.53□□□□□ -1.68
CCDC93-209ENST00000488908 GOLGA6L6A8MZA4 724 aa4.53□□□□□ -1.68
CCDC93-209ENST00000488908 MASP2O00187 686 aa4.53□□□□□ -1.68
CCDC93-209ENST00000488908 FOXP2O15409 715 aa4.53□□□□□ -1.68
CCDC93-209ENST00000488908 PPFIA4O75335 1185 aa4.53□□□□□ -1.68
CCDC93-209ENST00000488908 BPIFB4P59827 614 aa4.53□□□□□ -1.68
CCDC93-209ENST00000488908 SUMO1P63165 101 aaKnown RBP4.53□□□□□ -1.68
CCDC93-209ENST00000488908 LY6G5CQ5SRR4 150 aa4.53□□□□□ -1.68
CCDC93-209ENST00000488908 RHOUQ7L0Q8 258 aa4.53□□□□□ -1.68
CCDC93-209ENST00000488908 MCF2L2Q86YR7 1114 aa4.53□□□□□ -1.68
CCDC93-209ENST00000488908 VRK3Q8IV63 474 aa4.53□□□□□ -1.68
CCDC93-209ENST00000488908 NOSTRINQ8IVI9 506 aa4.53□□□□□ -1.68
CCDC93-209ENST00000488908 ANKRD53Q8N9V6 530 aa4.53□□□□□ -1.68
CCDC93-209ENST00000488908 RPL10LQ96L21 214 aaKnown RBP4.53□□□□□ -1.68
CCDC93-209ENST00000488908 IPO9Q96P70 1041 aaKnown RBP4.53□□□□□ -1.68
CCDC93-209ENST00000488908 GPHA2Q96T91 129 aa4.53□□□□□ -1.68
CCDC93-209ENST00000488908 CDC6Q99741 560 aa4.53□□□□□ -1.68
CCDC93-209ENST00000488908 TCF25Q9BQ70 676 aa4.53□□□□□ -1.68
CCDC93-209ENST00000488908 SPATA9Q9BWV2 254 aa4.53□□□□□ -1.68
CCDC93-209ENST00000488908 SAE1Q9UBE0 346 aaPredicted RBP4.53□□□□□ -1.68
CCDC93-209ENST00000488908 KLRG2A4D1S0 409 aaPredicted RBP4.52□□□□□ -1.69
CCDC93-209ENST00000488908 ZAR1LA6NP61 321 aa4.52□□□□□ -1.69
CCDC93-209ENST00000488908 GOLGA6L22H0YM25 854 aa4.52□□□□□ -1.69
CCDC93-209ENST00000488908 RABGGTBP53611 331 aa4.52□□□□□ -1.69
CCDC93-209ENST00000488908 GABREP78334 506 aa4.52□□□□□ -1.69
CCDC93-209ENST00000488908 ACAP1Q15027 740 aa4.52□□□□□ -1.69
CCDC93-209ENST00000488908 FKBP15Q5T1M5 1219 aa4.52□□□□□ -1.69
CCDC93-209ENST00000488908 MFSD5Q6N075 450 aa4.52□□□□□ -1.69
CCDC93-209ENST00000488908 SYCE2Q6PIF2 218 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms