RNA–Protein interactions for RNA: ENST00000488839.1

SFXN5-219, Transcript of sideroflexin 5, humanhuman

TSL 3

Gene SFXN5, Length 671 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-219ENST00000488839 MMP1P03956 469 aa13.91□□□□□ -0.18
SFXN5-219ENST00000488839 PAK2Q13177 524 aa13.91□□□□□ -0.18
SFXN5-219ENST00000488839 XKR3Q5GH77 459 aa13.91□□□□□ -0.18
SFXN5-219ENST00000488839 PIK3AP1Q6ZUJ8 805 aa13.91□□□□□ -0.18
SFXN5-219ENST00000488839 EXOC8Q8IYI6 725 aa13.91□□□□□ -0.18
SFXN5-219ENST00000488839 ARNTL2Q8WYA1 636 aa13.91□□□□□ -0.18
SFXN5-219ENST00000488839 TNFRSF25Q93038 417 aa13.91□□□□□ -0.18
SFXN5-219ENST00000488839 YME1L1Q96TA2 773 aa13.91□□□□□ -0.18
SFXN5-219ENST00000488839 AGO3Q9H9G7 860 aaKnown RBP13.91□□□□□ -0.18
SFXN5-219ENST00000488839 PLA2G2EQ9NZK7 142 aa13.91□□□□□ -0.18
SFXN5-219ENST00000488839 PADI3Q9ULW8 664 aa13.91□□□□□ -0.18
SFXN5-219ENST00000488839 RWDD3Q9Y3V2 267 aa13.91□□□□□ -0.18
SFXN5-219ENST00000488839 CDH23Q9H251 3354 aa13.91□□□□□ -0.18
SFXN5-219ENST00000488839 PTPRSQ13332 1948 aa13.91□□□□□ -0.18
SFXN5-219ENST00000488839 COL6A3P12111 3177 aa13.91□□□□□ -0.18
SFXN5-219ENST00000488839 LCHNA4D1U4 455 aa13.9□□□□□ -0.18
SFXN5-219ENST00000488839 C2orf72A6NCS6 295 aa13.9□□□□□ -0.18
SFXN5-219ENST00000488839 ZNF862O60290 1169 aa13.9□□□□□ -0.18
SFXN5-219ENST00000488839 CCNT1O60563 726 aaKnown RBP13.9□□□□□ -0.18
SFXN5-219ENST00000488839 LARGE1O95461 756 aa13.9□□□□□ -0.18
SFXN5-219ENST00000488839 STAG3L1P0CL83 205 aa13.9□□□□□ -0.18
SFXN5-219ENST00000488839 PSMC5P62195 406 aa13.9□□□□□ -0.18
SFXN5-219ENST00000488839 HMGN5P82970 282 aaKnown RBP13.9□□□□□ -0.18
SFXN5-219ENST00000488839 PRKCEQ02156 737 aa13.9□□□□□ -0.18
SFXN5-219ENST00000488839 SAFBQ15424 915 aaKnown RBP eCLIP13.9□□□□□ -0.18
SFXN5-219ENST00000488839 TARBP2Q15633 366 aaKnown RBP13.9□□□□□ -0.18
SFXN5-219ENST00000488839 TMCO2Q7Z6W1 182 aaPredicted RBP13.9□□□□□ -0.18
SFXN5-219ENST00000488839 LINC01465Q8N7H1 131 aa13.9□□□□□ -0.18
SFXN5-219ENST00000488839 OXER1Q8TDS5 423 aa13.9□□□□□ -0.18
SFXN5-219ENST00000488839 ATXN2LQ8WWM7 1075 aaKnown RBP13.9□□□□□ -0.18
SFXN5-219ENST00000488839 UIMC1Q96RL1 719 aa13.9□□□□□ -0.18
SFXN5-219ENST00000488839 MAP7D2Q96T17 732 aa13.9□□□□□ -0.18
SFXN5-219ENST00000488839 JPH2Q9BR39 696 aaPredicted RBP13.9□□□□□ -0.18
SFXN5-219ENST00000488839 UPF2Q9HAU5 1272 aaKnown RBP13.9□□□□□ -0.18
SFXN5-219ENST00000488839 C1orf112Q9NSG2 853 aa13.9□□□□□ -0.18
SFXN5-219ENST00000488839 HCSTQ9UBK5 93 aa13.9□□□□□ -0.18
SFXN5-219ENST00000488839 MTCH2Q9Y6C9 303 aa13.9□□□□□ -0.18
SFXN5-219ENST00000488839 CHMP2AO43633 222 aa13.89□□□□□ -0.19
SFXN5-219ENST00000488839 SLC37A4O43826 429 aa13.89□□□□□ -0.19
SFXN5-219ENST00000488839 MARCH6O60337 910 aa13.89□□□□□ -0.19
SFXN5-219ENST00000488839 RPS6KA5O75582 802 aa13.89□□□□□ -0.19
SFXN5-219ENST00000488839 RB1P06400 928 aa13.89□□□□□ -0.19
SFXN5-219ENST00000488839 P4HBP07237 508 aaKnown RBP13.89□□□□□ -0.19
SFXN5-219ENST00000488839 CD52P31358 61 aa13.89□□□□□ -0.19
SFXN5-219ENST00000488839 QARSP47897 775 aaKnown RBP13.89□□□□□ -0.19
SFXN5-219ENST00000488839 TMEM62Q0P6H9 643 aa13.89□□□□□ -0.19
SFXN5-219ENST00000488839 EPHA7Q15375 998 aa13.89□□□□□ -0.19
SFXN5-219ENST00000488839 KRT40Q6A162 431 aa13.89□□□□□ -0.19
SFXN5-219ENST00000488839 EFCAB12Q6NXP0 572 aa13.89□□□□□ -0.19
SFXN5-219ENST00000488839 FAM117BQ6P1L5 589 aa13.89□□□□□ -0.19
SFXN5-219ENST00000488839 CRIPAKQ8N1N5 446 aa13.89□□□□□ -0.19
SFXN5-219ENST00000488839 METTL13Q8N6R0 699 aa13.89□□□□□ -0.19
SFXN5-219ENST00000488839 SYMPKQ92797 1274 aaKnown RBP13.89□□□□□ -0.19
SFXN5-219ENST00000488839 KIF2CQ99661 725 aa13.89□□□□□ -0.19
SFXN5-219ENST00000488839 SUGCTQ9HAC7 445 aa13.89□□□□□ -0.19
SFXN5-219ENST00000488839 VAV3Q9UKW4 847 aa13.89□□□□□ -0.19
SFXN5-219ENST00000488839 LHX6Q9UPM6 363 aa13.89□□□□□ -0.19
SFXN5-219ENST00000488839 MYO9BQ13459 2157 aa13.89□□□□□ -0.19
SFXN5-219ENST00000488839 IGKV6-21A0A0C4DH24 114 aa13.88□□□□□ -0.19
SFXN5-219ENST00000488839 LPXNO60711 386 aa13.88□□□□□ -0.19
SFXN5-219ENST00000488839 GPR32O75388 356 aa13.88□□□□□ -0.19
SFXN5-219ENST00000488839 DGKIO75912 1065 aa13.88□□□□□ -0.19
SFXN5-219ENST00000488839 ARHGEF15O94989 841 aa13.88□□□□□ -0.19
SFXN5-219ENST00000488839 UPP2O95045 317 aa13.88□□□□□ -0.19
SFXN5-219ENST00000488839 STBD1O95210 358 aa13.88□□□□□ -0.19
SFXN5-219ENST00000488839 DNM2P50570 870 aa13.88□□□□□ -0.19
SFXN5-219ENST00000488839 TBC1D8BQ0IIM8 1120 aa13.88□□□□□ -0.19
SFXN5-219ENST00000488839 GRB10Q13322 594 aa13.88□□□□□ -0.19
SFXN5-219ENST00000488839 ORC2Q13416 577 aaPredicted RBP13.88□□□□□ -0.19
SFXN5-219ENST00000488839 RABEP1Q15276 862 aa13.88□□□□□ -0.19
SFXN5-219ENST00000488839 NPAS4Q8IUM7 802 aa13.88□□□□□ -0.19
SFXN5-219ENST00000488839 DIS3L2Q8IYB7 885 aaKnown RBP13.88□□□□□ -0.19
SFXN5-219ENST00000488839 FIBCD1Q8N539 461 aa13.88□□□□□ -0.19
SFXN5-219ENST00000488839 HAS1Q92839 578 aa13.88□□□□□ -0.19
SFXN5-219ENST00000488839 ZNF689Q96CS4 500 aaPredicted RBP13.88□□□□□ -0.19
SFXN5-219ENST00000488839 ZBTB10Q96DT7 871 aa13.88□□□□□ -0.19
SFXN5-219ENST00000488839 CERS4Q9HA82 394 aa13.88□□□□□ -0.19
SFXN5-219ENST00000488839 RC3H2Q9HBD1 1191 aaKnown RBP13.88□□□□□ -0.19
SFXN5-219ENST00000488839 ERVK-5Q9HDB9 667 aa13.88□□□□□ -0.19
SFXN5-219ENST00000488839 RGS18Q9NS28 235 aa13.88□□□□□ -0.19
SFXN5-219ENST00000488839 GJB4Q9NTQ9 266 aa13.88□□□□□ -0.19
SFXN5-219ENST00000488839 CHD9Q3L8U1 2897 aa13.88□□□□□ -0.19
SFXN5-219ENST00000488839 SIP14410 1827 aa13.87□□□□□ -0.19
SFXN5-219ENST00000488839 TTC3P53804 2025 aa13.87□□□□□ -0.19
SFXN5-219ENST00000488839 EPOPA6NHQ4 379 aa13.87□□□□□ -0.19
SFXN5-219ENST00000488839 BTBD18B2RXH4 712 aa13.87□□□□□ -0.19
SFXN5-219ENST00000488839 DLL1O00548 723 aa13.87□□□□□ -0.19
SFXN5-219ENST00000488839 MAFO75444 373 aaPredicted RBP13.87□□□□□ -0.19
SFXN5-219ENST00000488839 EIF4BP23588 611 aaKnown RBP13.87□□□□□ -0.19
SFXN5-219ENST00000488839 NFX1Q12986 1120 aaKnown RBP13.87□□□□□ -0.19
SFXN5-219ENST00000488839 NR5A1Q13285 461 aa13.87□□□□□ -0.19
SFXN5-219ENST00000488839 UGCGQ16739 394 aa13.87□□□□□ -0.19
SFXN5-219ENST00000488839 PTPROQ16827 1216 aa13.87□□□□□ -0.19
SFXN5-219ENST00000488839 AAK1Q2M2I8 961 aa13.87□□□□□ -0.19
SFXN5-219ENST00000488839 NAALADL2Q58DX5 795 aa13.87□□□□□ -0.19
SFXN5-219ENST00000488839 OTUD6AQ7L8S5 288 aa13.87□□□□□ -0.19
SFXN5-219ENST00000488839 RTN4RL1Q86UN2 441 aaPredicted RBP13.87□□□□□ -0.19
SFXN5-219ENST00000488839 C4orf19Q8IY42 314 aa13.87□□□□□ -0.19
SFXN5-219ENST00000488839 CMTR2Q8IYT2 770 aaKnown RBP13.87□□□□□ -0.19
SFXN5-219ENST00000488839 NEK9Q8TD19 979 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms