RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 C5P01031 1676 aa17.5■□□□□ 0.39
MCF2L-229ENST00000488765 INHBCP55103 352 aa17.49■□□□□ 0.39
MCF2L-229ENST00000488765 NPY5RQ15761 445 aa17.49■□□□□ 0.39
MCF2L-229ENST00000488765 TSNAXIP1Q2TAA8 658 aa17.49■□□□□ 0.39
MCF2L-229ENST00000488765 ACBD5Q5T8D3 534 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-229ENST00000488765 ANKLE1Q8NAG6 615 aa17.49■□□□□ 0.39
MCF2L-229ENST00000488765 KIAA0895Q8NCT3 520 aa17.49■□□□□ 0.39
MCF2L-229ENST00000488765 MYLK2Q9H1R3 596 aa17.49■□□□□ 0.39
MCF2L-229ENST00000488765 VCXQ9H320 206 aa17.49■□□□□ 0.39
MCF2L-229ENST00000488765 CHMP2BQ9UQN3 213 aa17.49■□□□□ 0.39
MCF2L-229ENST00000488765 PJA2O43164 708 aa17.49■□□□□ 0.39
MCF2L-229ENST00000488765 PLCG2P16885 1265 aa17.49■□□□□ 0.39
MCF2L-229ENST00000488765 SEPT2Q15019 361 aa17.49■□□□□ 0.39
MCF2L-229ENST00000488765 KHDC1Q4VXA5 237 aaKnown RBP17.49■□□□□ 0.39
MCF2L-229ENST00000488765 OLFML2BQ68BL8 750 aa17.49■□□□□ 0.39
MCF2L-229ENST00000488765 ECHDC2Q86YB7 292 aa17.49■□□□□ 0.39
MCF2L-229ENST00000488765 LCORLQ8N3X6 602 aa17.49■□□□□ 0.39
MCF2L-229ENST00000488765 MRRFQ96E11 262 aaKnown RBP17.49■□□□□ 0.39
MCF2L-229ENST00000488765 DENND2DQ9H6A0 471 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-229ENST00000488765 ERVK-5Q9HDB9 667 aa17.49■□□□□ 0.39
MCF2L-229ENST00000488765 KLHL14Q9P2G3 628 aa17.49■□□□□ 0.39
MCF2L-229ENST00000488765 ABCB4P21439 1286 aa17.49■□□□□ 0.39
MCF2L-229ENST00000488765 USP46P62068 366 aa17.49■□□□□ 0.39
MCF2L-229ENST00000488765 CDK17Q00537 523 aa17.49■□□□□ 0.39
MCF2L-229ENST00000488765 EXOC3L1Q86VI1 746 aa17.49■□□□□ 0.39
MCF2L-229ENST00000488765 SH3RF3Q8TEJ3 882 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-229ENST00000488765 DNAJC1Q96KC8 554 aaKnown RBP17.49■□□□□ 0.39
MCF2L-229ENST00000488765 KIAA1683Q9H0B3 1180 aa17.49■□□□□ 0.39
MCF2L-229ENST00000488765 ETNK2Q9NVF9 386 aa17.49■□□□□ 0.39
MCF2L-229ENST00000488765 MYH2Q9UKX2 1941 aa17.48■□□□□ 0.39
MCF2L-229ENST00000488765 UBE4AQ14139 1066 aa17.48■□□□□ 0.39
MCF2L-229ENST00000488765 MPP2Q14168 576 aa17.48■□□□□ 0.39
MCF2L-229ENST00000488765 NELFCDQ8IXH7 590 aa17.48■□□□□ 0.39
MCF2L-229ENST00000488765 FAM163AQ96GL9 167 aaPredicted RBP17.48■□□□□ 0.39
MCF2L-229ENST00000488765 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.48■□□□□ 0.394e-7■□□□□ 9
MCF2L-229ENST00000488765 RMI1Q9H9A7 625 aa17.48■□□□□ 0.39
MCF2L-229ENST00000488765 TMEM59LQ9UK28 342 aa17.48■□□□□ 0.39
MCF2L-229ENST00000488765 LOC102724428A0A0B4J2F2 783 aa17.48■□□□□ 0.39
MCF2L-229ENST00000488765 RASGRF2O14827 1237 aa17.48■□□□□ 0.39
MCF2L-229ENST00000488765 NVLO15381 856 aaKnown RBP17.48■□□□□ 0.39
MCF2L-229ENST00000488765 RHOBTB3O94955 611 aa17.48■□□□□ 0.39
MCF2L-229ENST00000488765 OATP04181 439 aa17.48■□□□□ 0.39
MCF2L-229ENST00000488765 ABCD1P33897 745 aa17.48■□□□□ 0.39
MCF2L-229ENST00000488765 SIK1P57059 783 aa17.48■□□□□ 0.39
MCF2L-229ENST00000488765 BARGINQ6ZT62 677 aa17.48■□□□□ 0.39
MCF2L-229ENST00000488765 ASRGL1Q7L266 308 aa17.48■□□□□ 0.39
MCF2L-229ENST00000488765 FAM114A1Q8IWE2 563 aa17.48■□□□□ 0.39
MCF2L-229ENST00000488765 CDK5RAP3Q96JB5 506 aa17.48■□□□□ 0.39
MCF2L-229ENST00000488765 TGS1Q96RS0 853 aaKnown RBP17.48■□□□□ 0.39
MCF2L-229ENST00000488765 TRIM7Q9C029 511 aa17.48■□□□□ 0.39
MCF2L-229ENST00000488765 FAM205AQ6ZU69 1335 aa17.48■□□□□ 0.39
MCF2L-229ENST00000488765 CCDC169A6NNP5 214 aa17.47■□□□□ 0.39
MCF2L-229ENST00000488765 ZNF131P52739 623 aa17.47■□□□□ 0.39
MCF2L-229ENST00000488765 BPIFB4P59827 614 aa17.47■□□□□ 0.39
MCF2L-229ENST00000488765 P3H1Q32P28 736 aa17.47■□□□□ 0.39
MCF2L-229ENST00000488765 INTS8Q75QN2 995 aaKnown RBP17.47■□□□□ 0.39
MCF2L-229ENST00000488765 TRIM42Q8IWZ5 723 aa17.47■□□□□ 0.39
MCF2L-229ENST00000488765 SCG3Q8WXD2 468 aaKnown RBP17.47■□□□□ 0.39
MCF2L-229ENST00000488765 TBC1D10AQ9BXI6 508 aa17.47■□□□□ 0.39
MCF2L-229ENST00000488765 CYP39A1Q9NYL5 469 aa17.47■□□□□ 0.39
MCF2L-229ENST00000488765 ARL2BPQ9Y2Y0 163 aa17.47■□□□□ 0.39
MCF2L-229ENST00000488765 PCDHGA4Q9Y5G9 962 aa17.47■□□□□ 0.39
MCF2L-229ENST00000488765 WDR19Q8NEZ3 1342 aa17.47■□□□□ 0.39
MCF2L-229ENST00000488765 A0A1W2PQJ5 194 aa17.47■□□□□ 0.39
MCF2L-229ENST00000488765 OPTNQ96CV9 577 aa17.47■□□□□ 0.39
MCF2L-229ENST00000488765 DHTKD1Q96HY7 919 aaPredicted RBP17.47■□□□□ 0.39
MCF2L-229ENST00000488765 TMOD4Q9NZQ9 345 aa17.47■□□□□ 0.39
MCF2L-229ENST00000488765 LRP2BPQ9P2M1 347 aa17.47■□□□□ 0.39
MCF2L-229ENST00000488765 BICDL2A1A5D9 508 aa17.47■□□□□ 0.39
MCF2L-229ENST00000488765 GSG1L2A8MUP6 293 aa17.47■□□□□ 0.39
MCF2L-229ENST00000488765 AFPP02771 609 aaKnown RBP17.47■□□□□ 0.39
MCF2L-229ENST00000488765 TECP42680 631 aa17.47■□□□□ 0.39
MCF2L-229ENST00000488765 PTK2Q05397 1052 aa17.47■□□□□ 0.39
MCF2L-229ENST00000488765 TXNRD1Q16881 649 aa17.47■□□□□ 0.39
MCF2L-229ENST00000488765 IFIT1BQ5T764 474 aaKnown RBP17.47■□□□□ 0.39
MCF2L-229ENST00000488765 RXFP1Q9HBX9 757 aa17.47■□□□□ 0.39
MCF2L-229ENST00000488765 OSGEPQ9NPF4 335 aa17.47■□□□□ 0.39
MCF2L-229ENST00000488765 MYO5AQ9Y4I1 1855 aaKnown RBP17.47■□□□□ 0.39
MCF2L-229ENST00000488765 C4AP0C0L4 1744 aa17.46■□□□□ 0.39
MCF2L-229ENST00000488765 C4BP0C0L5 1744 aa17.46■□□□□ 0.39
MCF2L-229ENST00000488765 FAM196BA6NMK8 535 aa17.46■□□□□ 0.39
MCF2L-229ENST00000488765 GNA14O95837 355 aa17.46■□□□□ 0.39
MCF2L-229ENST00000488765 RASA1P20936 1047 aa17.46■□□□□ 0.39
MCF2L-229ENST00000488765 ITPK1Q13572 414 aa17.46■□□□□ 0.39
MCF2L-229ENST00000488765 ATP8B4Q8TF62 1192 aa17.46■□□□□ 0.39
MCF2L-229ENST00000488765 TRIM9Q9C026 710 aa17.46■□□□□ 0.39
MCF2L-229ENST00000488765 PABPC3Q9H361 631 aaKnown RBP17.46■□□□□ 0.39
MCF2L-229ENST00000488765 SLCO1B3Q9NPD5 702 aa17.46■□□□□ 0.39
MCF2L-229ENST00000488765 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.46■□□□□ 0.39
MCF2L-229ENST00000488765 TRAF5O00463 557 aa17.46■□□□□ 0.39
MCF2L-229ENST00000488765 UNC5CO95185 931 aa17.46■□□□□ 0.39
MCF2L-229ENST00000488765 LCA5LO95447 670 aa17.46■□□□□ 0.39
MCF2L-229ENST00000488765 HNRNPH3P31942 346 aaKnown RBP17.46■□□□□ 0.39
MCF2L-229ENST00000488765 DR1Q01658 176 aa17.46■□□□□ 0.39
MCF2L-229ENST00000488765 CACNB1Q02641 598 aaPredicted RBP17.46■□□□□ 0.39
MCF2L-229ENST00000488765 RCN1Q15293 331 aa17.46■□□□□ 0.39
MCF2L-229ENST00000488765 EXOC3L4Q17RC7 722 aa17.46■□□□□ 0.39
MCF2L-229ENST00000488765 FAM47AQ5JRC9 791 aa17.46■□□□□ 0.39
MCF2L-229ENST00000488765 SNX30Q5VWJ9 437 aa17.46■□□□□ 0.39
MCF2L-229ENST00000488765 SRBD1Q8N5C6 995 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms