RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 MCMDC2Q4G0Z9 681 aa6.98□□□□□ -1.29
CDHR3-213ENST00000488386 GJC2Q5T442 439 aaPredicted RBP6.98□□□□□ -1.29
CDHR3-213ENST00000488386 MFSD14CQ5VZR4 134 aa6.98□□□□□ -1.29
CDHR3-213ENST00000488386 SNRNP48Q6IEG0 339 aaKnown RBP6.98□□□□□ -1.29
CDHR3-213ENST00000488386 CWC27Q6UX04 472 aaKnown RBP6.98□□□□□ -1.29
CDHR3-213ENST00000488386 KCTD1Q719H9 257 aa6.98□□□□□ -1.29
CDHR3-213ENST00000488386 NECAB2Q7Z6G3 386 aa6.98□□□□□ -1.29
CDHR3-213ENST00000488386 TBC1D10CQ8IV04 446 aa6.98□□□□□ -1.29
CDHR3-213ENST00000488386 WDR89Q96FK6 387 aaPredicted RBP6.98□□□□□ -1.29
CDHR3-213ENST00000488386 MMP19Q99542 508 aa6.98□□□□□ -1.29
CDHR3-213ENST00000488386 CORO1BQ9BR76 489 aa6.98□□□□□ -1.29
CDHR3-213ENST00000488386 HTATIP2Q9BUP3 242 aa6.98□□□□□ -1.29
CDHR3-213ENST00000488386 C11orf49Q9H6J7 331 aa6.98□□□□□ -1.29
CDHR3-213ENST00000488386 ZFYVE1Q9HBF4 777 aa6.98□□□□□ -1.29
CDHR3-213ENST00000488386 HELLSQ9NRZ9 838 aa6.98□□□□□ -1.29
CDHR3-213ENST00000488386 HOMER2Q9NSB8 354 aa6.98□□□□□ -1.29
CDHR3-213ENST00000488386 VTI1BQ9UEU0 232 aa6.98□□□□□ -1.29
CDHR3-213ENST00000488386 ZNF214Q9UL59 606 aaPredicted RBP6.98□□□□□ -1.29
CDHR3-213ENST00000488386 OGDHLQ9ULD0 1010 aa6.98□□□□□ -1.29
CDHR3-213ENST00000488386 ADAMTS5Q9UNA0 930 aa6.98□□□□□ -1.29
CDHR3-213ENST00000488386 STX8Q9UNK0 236 aa6.98□□□□□ -1.29
CDHR3-213ENST00000488386 FRMPD2Q68DX3 1309 aaPredicted RBP6.98□□□□□ -1.29
CDHR3-213ENST00000488386 PLIN4Q96Q06 1357 aa6.97□□□□□ -1.29
CDHR3-213ENST00000488386 MCM3APO60318 1980 aa6.97□□□□□ -1.29
CDHR3-213ENST00000488386 RBM47A0AV96 593 aaKnown RBP6.97□□□□□ -1.29
CDHR3-213ENST00000488386 MEGF11A6BM72 1044 aa6.97□□□□□ -1.29
CDHR3-213ENST00000488386 TMEM232C9JQI7 657 aa6.97□□□□□ -1.29
CDHR3-213ENST00000488386 ZNF862O60290 1169 aa6.97□□□□□ -1.29
CDHR3-213ENST00000488386 TIAF1O95411 115 aa6.97□□□□□ -1.29
CDHR3-213ENST00000488386 SLC3A2P08195 630 aaKnown RBP6.97□□□□□ -1.29
CDHR3-213ENST00000488386 GSTP1P09211 210 aaKnown RBP6.97□□□□□ -1.29
CDHR3-213ENST00000488386 HOXC6P09630 235 aa6.97□□□□□ -1.29
CDHR3-213ENST00000488386 FURINP09958 794 aa6.97□□□□□ -1.29
CDHR3-213ENST00000488386 CYBAP13498 195 aa6.97□□□□□ -1.29
CDHR3-213ENST00000488386 GSPT1P15170 499 aaKnown RBP6.97□□□□□ -1.29
CDHR3-213ENST00000488386 BMP6P22004 513 aa6.97□□□□□ -1.29
CDHR3-213ENST00000488386 PTGS1P23219 599 aa6.97□□□□□ -1.29
CDHR3-213ENST00000488386 PPP2R3AQ06190 1150 aa6.97□□□□□ -1.29
CDHR3-213ENST00000488386 IKQ13123 557 aaPredicted RBP6.97□□□□□ -1.29
CDHR3-213ENST00000488386 LRRC26Q2I0M4 334 aa6.97□□□□□ -1.29
CDHR3-213ENST00000488386 RSPO4Q2I0M5 234 aaPredicted RBP6.97□□□□□ -1.29
CDHR3-213ENST00000488386 TTBK2Q6IQ55 1244 aa6.97□□□□□ -1.29
CDHR3-213ENST00000488386 CCDC174Q6PII3 467 aa6.97□□□□□ -1.29
CDHR3-213ENST00000488386 RIOX2Q8IUF8 465 aa6.97□□□□□ -1.29
CDHR3-213ENST00000488386 ARMC10Q8N2F6 343 aa6.97□□□□□ -1.29
CDHR3-213ENST00000488386 MB21D1Q8N884 522 aa6.97□□□□□ -1.29
CDHR3-213ENST00000488386 SHCBP1Q8NEM2 672 aa6.97□□□□□ -1.29
CDHR3-213ENST00000488386 GRIN3AQ8TCU5 1115 aa6.97□□□□□ -1.29
CDHR3-213ENST00000488386 TP53INP1Q96A56 240 aa6.97□□□□□ -1.29
CDHR3-213ENST00000488386 CRELD1Q96HD1 420 aa6.97□□□□□ -1.29
CDHR3-213ENST00000488386 MAML3Q96JK9 1138 aa6.97□□□□□ -1.29
CDHR3-213ENST00000488386 DDX20Q9UHI6 824 aaKnown RBP6.97□□□□□ -1.29
CDHR3-213ENST00000488386 NEDD4P46934 1319 aa6.97□□□□□ -1.29
CDHR3-213ENST00000488386 CCDC171Q6TFL3 1326 aa6.97□□□□□ -1.29
CDHR3-213ENST00000488386 FCER1AP12319 257 aa6.96□□□□□ -1.3
CDHR3-213ENST00000488386 BMP3P12645 472 aa6.96□□□□□ -1.3
CDHR3-213ENST00000488386 DRD2P14416 443 aa6.96□□□□□ -1.3
CDHR3-213ENST00000488386 LIG1P18858 919 aa6.96□□□□□ -1.3
CDHR3-213ENST00000488386 NME2P22392 152 aa6.96□□□□□ -1.3
CDHR3-213ENST00000488386 SLC16A2P36021 539 aa6.96□□□□□ -1.3
CDHR3-213ENST00000488386 FXR1P51114 621 aaKnown RBP eCLIP6.96□□□□□ -1.3
CDHR3-213ENST00000488386 ZNF252P-AS1Q0IIN9 211 aa6.96□□□□□ -1.3
CDHR3-213ENST00000488386 KCTD2Q14681 263 aa6.96□□□□□ -1.3
CDHR3-213ENST00000488386 CCDC96Q2M329 555 aa6.96□□□□□ -1.3
CDHR3-213ENST00000488386 ZNF792Q3KQV3 632 aa6.96□□□□□ -1.3
CDHR3-213ENST00000488386 NKAPLQ5M9Q1 402 aa6.96□□□□□ -1.3
CDHR3-213ENST00000488386 SMG8Q8ND04 991 aaKnown RBP6.96□□□□□ -1.3
CDHR3-213ENST00000488386 MKL1Q969V6 931 aa6.96□□□□□ -1.3
CDHR3-213ENST00000488386 FERMT2Q96AC1 680 aa6.96□□□□□ -1.3
CDHR3-213ENST00000488386 FAM46AQ96IP4 442 aaKnown RBP6.96□□□□□ -1.3
CDHR3-213ENST00000488386 CEP44Q9C0F1 390 aa6.96□□□□□ -1.3
CDHR3-213ENST00000488386 SENP6Q9GZR1 1112 aaPredicted RBP6.96□□□□□ -1.3
CDHR3-213ENST00000488386 CPVLQ9H3G5 476 aa6.96□□□□□ -1.3
CDHR3-213ENST00000488386 MROH8Q9H579 483 aa6.96□□□□□ -1.3
CDHR3-213ENST00000488386 CTDP1Q9Y5B0 961 aaPredicted RBP6.96□□□□□ -1.3
CDHR3-213ENST00000488386 LAMA4Q16363 1823 aa6.96□□□□□ -1.3
CDHR3-213ENST00000488386 LCTP09848 1927 aa6.95□□□□□ -1.3
CDHR3-213ENST00000488386 STRNO43815 780 aa6.95□□□□□ -1.3
CDHR3-213ENST00000488386 ZBED4O75132 1171 aa6.95□□□□□ -1.3
CDHR3-213ENST00000488386 SLC25A27O95847 323 aa6.95□□□□□ -1.3
CDHR3-213ENST00000488386 PGK1P00558 417 aa6.95□□□□□ -1.3
CDHR3-213ENST00000488386 GOLGA8HP0CJ92 632 aa6.95□□□□□ -1.3
CDHR3-213ENST00000488386 ADH5P11766 374 aa6.95□□□□□ -1.3
CDHR3-213ENST00000488386 COL6A1P12109 1028 aa6.95□□□□□ -1.3
CDHR3-213ENST00000488386 ARNTP27540 789 aa6.95□□□□□ -1.3
CDHR3-213ENST00000488386 SLC1A4P43007 532 aa6.95□□□□□ -1.3
CDHR3-213ENST00000488386 CCDC85BQ15834 202 aaPredicted RBP6.95□□□□□ -1.3
CDHR3-213ENST00000488386 MUM1L1Q5H9M0 696 aa6.95□□□□□ -1.3
CDHR3-213ENST00000488386 EXOSC6Q5RKV6 272 aaKnown RBP6.95□□□□□ -1.3
CDHR3-213ENST00000488386 PCNX4Q63HM2 1172 aa6.95□□□□□ -1.3
CDHR3-213ENST00000488386 OLFML2BQ68BL8 750 aa6.95□□□□□ -1.3
CDHR3-213ENST00000488386 ANKRD34AQ69YU3 496 aa6.95□□□□□ -1.3
CDHR3-213ENST00000488386 FDX2Q6P4F2 183 aa6.95□□□□□ -1.3
CDHR3-213ENST00000488386 PRPF38AQ8NAV1 312 aaKnown RBP6.95□□□□□ -1.3
CDHR3-213ENST00000488386 GMCL1P1Q8NEA9 526 aa6.95□□□□□ -1.3
CDHR3-213ENST00000488386 FGD4Q96M96 766 aa6.95□□□□□ -1.3
CDHR3-213ENST00000488386 TMEM47Q9BQJ4 181 aa6.95□□□□□ -1.3
CDHR3-213ENST00000488386 TEX13BQ9BXU2 312 aa6.95□□□□□ -1.3
CDHR3-213ENST00000488386 SUGCTQ9HAC7 445 aa6.95□□□□□ -1.3
CDHR3-213ENST00000488386 SLC38A10Q9HBR0 1119 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms