RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 CDK5RAP3Q96JB5 506 aa12.33□□□□□ -0.44
UBE4B-210ENST00000488228 LBHD1Q9BQE6 289 aaPredicted RBP12.33□□□□□ -0.44
UBE4B-210ENST00000488228 SUGCTQ9HAC7 445 aa12.33□□□□□ -0.44
UBE4B-210ENST00000488228 GDPD2Q9HCC8 539 aa12.33□□□□□ -0.44
UBE4B-210ENST00000488228 ATP6V1DQ9Y5K8 247 aa12.33□□□□□ -0.44
UBE4B-210ENST00000488228 SMIM35A0A1B0GVV1 85 aa12.32□□□□□ -0.44
UBE4B-210ENST00000488228 ARHGEF35A5YM69 484 aa12.32□□□□□ -0.44
UBE4B-210ENST00000488228 MAGEB2O15479 319 aa12.32□□□□□ -0.44
UBE4B-210ENST00000488228 MAFO75444 373 aaPredicted RBP12.32□□□□□ -0.44
UBE4B-210ENST00000488228 VTNP04004 478 aa12.32□□□□□ -0.44
UBE4B-210ENST00000488228 PLCG1P19174 1290 aa12.32□□□□□ -0.44
UBE4B-210ENST00000488228 ME1P48163 572 aa12.32□□□□□ -0.44
UBE4B-210ENST00000488228 EPHB4P54760 987 aa12.32□□□□□ -0.44
UBE4B-210ENST00000488228 FPGSQ05932 587 aa12.32□□□□□ -0.44
UBE4B-210ENST00000488228 MKRN4PQ13434 485 aaPredicted RBP12.32□□□□□ -0.44
UBE4B-210ENST00000488228 HYIQ5T013 277 aa12.32□□□□□ -0.44
UBE4B-210ENST00000488228 MFSD5Q6N075 450 aa12.32□□□□□ -0.44
UBE4B-210ENST00000488228 EFCAB12Q6NXP0 572 aa12.32□□□□□ -0.44
UBE4B-210ENST00000488228 OTUD6AQ7L8S5 288 aa12.32□□□□□ -0.44
UBE4B-210ENST00000488228 DEFB128Q7Z7B8 93 aa12.32□□□□□ -0.44
UBE4B-210ENST00000488228 KIAA0319LQ8IZA0 1049 aa12.32□□□□□ -0.44
UBE4B-210ENST00000488228 RETREG2Q8NC44 543 aa12.32□□□□□ -0.44
UBE4B-210ENST00000488228 SLC7A3Q8WY07 619 aa12.32□□□□□ -0.44
UBE4B-210ENST00000488228 ZNF668Q96K58 619 aaPredicted RBP12.32□□□□□ -0.44
UBE4B-210ENST00000488228 SPATA32Q96LK8 384 aa12.32□□□□□ -0.44
UBE4B-210ENST00000488228 IPO9Q96P70 1041 aaKnown RBP12.32□□□□□ -0.44
UBE4B-210ENST00000488228 NACC1Q96RE7 527 aa12.32□□□□□ -0.44
UBE4B-210ENST00000488228 MAP7D2Q96T17 732 aa12.32□□□□□ -0.44
UBE4B-210ENST00000488228 OSBPL7Q9BZF2 842 aa12.32□□□□□ -0.44
UBE4B-210ENST00000488228 BHMT2Q9H2M3 363 aa12.32□□□□□ -0.44
UBE4B-210ENST00000488228 XPNPEP1Q9NQW7 623 aa12.32□□□□□ -0.44
UBE4B-210ENST00000488228 ANKEF1Q9NU02 776 aa12.32□□□□□ -0.44
UBE4B-210ENST00000488228 DBR1Q9UK59 544 aaKnown RBP12.32□□□□□ -0.44
UBE4B-210ENST00000488228 CFAP45Q9UL16 551 aa12.32□□□□□ -0.44
UBE4B-210ENST00000488228 AKT3Q9Y243 479 aa12.32□□□□□ -0.44
UBE4B-210ENST00000488228 STK24Q9Y6E0 443 aa12.32□□□□□ -0.44
UBE4B-210ENST00000488228 CDY2AQ9Y6F7 541 aa12.32□□□□□ -0.44
UBE4B-210ENST00000488228 A0A087X0B3 334 aa12.31□□□□□ -0.44
UBE4B-210ENST00000488228 IGKV6-21A0A0C4DH24 114 aa12.31□□□□□ -0.44
UBE4B-210ENST00000488228 RSPH10B2B2RC85 870 aa12.31□□□□□ -0.44
UBE4B-210ENST00000488228 NBNO60934 754 aa12.31□□□□□ -0.44
UBE4B-210ENST00000488228 CAND2O75155 1236 aa12.31□□□□□ -0.44
UBE4B-210ENST00000488228 IQCF3P0C7M6 154 aa12.31□□□□□ -0.44
UBE4B-210ENST00000488228 RSPH10BP0C881 870 aa12.31□□□□□ -0.44
UBE4B-210ENST00000488228 ACRP10323 421 aa12.31□□□□□ -0.44
UBE4B-210ENST00000488228 MUTP22033 750 aa12.31□□□□□ -0.44
UBE4B-210ENST00000488228 RFC5P40937 340 aa12.31□□□□□ -0.44
UBE4B-210ENST00000488228 MGAT3Q09327 533 aa12.31□□□□□ -0.44
UBE4B-210ENST00000488228 TPRNQ4KMQ1 711 aa12.31□□□□□ -0.44
UBE4B-210ENST00000488228 AXDND1Q5T1B0 1012 aaPredicted RBP12.31□□□□□ -0.44
UBE4B-210ENST00000488228 SHC4Q6S5L8 630 aa12.31□□□□□ -0.44
UBE4B-210ENST00000488228 RSPH3Q86UC2 560 aa12.31□□□□□ -0.44
UBE4B-210ENST00000488228 TMEM199Q8N511 208 aa12.31□□□□□ -0.44
UBE4B-210ENST00000488228 TMEM143Q96AN5 459 aa12.31□□□□□ -0.44
UBE4B-210ENST00000488228 VWCEQ96DN2 955 aa12.31□□□□□ -0.44
UBE4B-210ENST00000488228 CALML4Q96GE6 196 aa12.31□□□□□ -0.44
UBE4B-210ENST00000488228 RUSC1Q9BVN2 902 aa12.31□□□□□ -0.44
UBE4B-210ENST00000488228 DHX33Q9H6R0 707 aaKnown RBP12.31□□□□□ -0.44
UBE4B-210ENST00000488228 ATP6V0A4Q9HBG4 840 aa12.31□□□□□ -0.44
UBE4B-210ENST00000488228 CHMP5Q9NZZ3 219 aa12.31□□□□□ -0.44
UBE4B-210ENST00000488228 RCOR1Q9UKL0 485 aa12.31□□□□□ -0.44
UBE4B-210ENST00000488228 PCDHA7Q9UN72 937 aa12.31□□□□□ -0.44
UBE4B-210ENST00000488228 GINS2Q9Y248 185 aa12.31□□□□□ -0.44
UBE4B-210ENST00000488228 CUTAO60888 179 aa12.3□□□□□ -0.44
UBE4B-210ENST00000488228 EYA4O95677 639 aa12.3□□□□□ -0.44
UBE4B-210ENST00000488228 CHRNA1P02708 482 aa12.3□□□□□ -0.44
UBE4B-210ENST00000488228 SSBP05455 408 aaKnown RBP eCLIP12.3□□□□□ -0.44
UBE4B-210ENST00000488228 GHRP10912 638 aa12.3□□□□□ -0.44
UBE4B-210ENST00000488228 TXLNAP40222 546 aa12.3□□□□□ -0.44
UBE4B-210ENST00000488228 GPNMBQ14956 572 aa12.3□□□□□ -0.44
UBE4B-210ENST00000488228 KIZQ2M2Z5 673 aa12.3□□□□□ -0.44
UBE4B-210ENST00000488228 PRPF38BQ5VTL8 546 aaKnown RBP12.3□□□□□ -0.44
UBE4B-210ENST00000488228 PADI6Q6TGC4 694 aa12.3□□□□□ -0.44
UBE4B-210ENST00000488228 CHRDL2Q6WN34 429 aa12.3□□□□□ -0.44
UBE4B-210ENST00000488228 MAEAQ7L5Y9 396 aa12.3□□□□□ -0.44
UBE4B-210ENST00000488228 RPAINQ86UA6 219 aa12.3□□□□□ -0.44
UBE4B-210ENST00000488228 MTRQ99707 1265 aa12.3□□□□□ -0.44
UBE4B-210ENST00000488228 GDF15Q99988 308 aa12.3□□□□□ -0.44
UBE4B-210ENST00000488228 CCSER1Q9C0I3 900 aa12.3□□□□□ -0.44
UBE4B-210ENST00000488228 NT5C3AQ9H0P0 336 aa12.3□□□□□ -0.44
UBE4B-210ENST00000488228 POLR3FQ9H1D9 316 aaPredicted RBP12.3□□□□□ -0.44
UBE4B-210ENST00000488228 GPRC5CQ9NQ84 441 aa12.3□□□□□ -0.44
UBE4B-210ENST00000488228 BLOC1S4Q9NUP1 217 aa12.3□□□□□ -0.44
UBE4B-210ENST00000488228 DNM3Q9UQ16 869 aa12.3□□□□□ -0.44
UBE4B-210ENST00000488228 PPME1Q9Y570 386 aa12.3□□□□□ -0.44
UBE4B-210ENST00000488228 TRPV2Q9Y5S1 764 aa12.3□□□□□ -0.44
UBE4B-210ENST00000488228 M0QZ92 97 aa12.29□□□□□ -0.44
UBE4B-210ENST00000488228 DGAT1O75907 488 aa12.29□□□□□ -0.44
UBE4B-210ENST00000488228 XRCC6P12956 609 aaKnown RBP eCLIP12.29□□□□□ -0.44
UBE4B-210ENST00000488228 TMOD1P28289 359 aa12.29□□□□□ -0.44
UBE4B-210ENST00000488228 PPIGQ13427 754 aaKnown RBP eCLIP12.29□□□□□ -0.44
UBE4B-210ENST00000488228 DHX8Q14562 1220 aaKnown RBP12.29□□□□□ -0.44
UBE4B-210ENST00000488228 TCTN1Q2MV58 587 aa12.29□□□□□ -0.44
UBE4B-210ENST00000488228 FAM26DQ5JW98 314 aa12.29□□□□□ -0.44
UBE4B-210ENST00000488228 RHPN2Q8IUC4 686 aa12.29□□□□□ -0.44
UBE4B-210ENST00000488228 KSR1Q8IVT5 923 aa12.29□□□□□ -0.44
UBE4B-210ENST00000488228 PDILTQ8N807 584 aa12.29□□□□□ -0.44
UBE4B-210ENST00000488228 ASAP3Q8TDY4 903 aa12.29□□□□□ -0.44
UBE4B-210ENST00000488228 TMEM40Q8WWA1 233 aa12.29□□□□□ -0.44
UBE4B-210ENST00000488228 RAD54LQ92698 747 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms