RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 FXR1P51114 621 aaKnown RBP eCLIP15.06■□□□□ 0
COPS7B-221ENST00000488111 SEMA3FQ13275 785 aa15.06■□□□□ 0
COPS7B-221ENST00000488111 GRB10Q13322 594 aa15.06■□□□□ 0
COPS7B-221ENST00000488111 SEPT14Q6ZU15 432 aa15.06■□□□□ 0
COPS7B-221ENST00000488111 NIPA1Q7RTP0 329 aa15.06■□□□□ 0
COPS7B-221ENST00000488111 RIN2Q8WYP3 895 aaPredicted RBP15.06■□□□□ 0
COPS7B-221ENST00000488111 CALML4Q96GE6 196 aa15.06■□□□□ 0
COPS7B-221ENST00000488111 PAGE5Q96GU1 130 aa15.06■□□□□ 0
COPS7B-221ENST00000488111 UNC45AQ9H3U1 944 aa15.06■□□□□ 0
COPS7B-221ENST00000488111 ZFYVE28Q9HCC9 887 aa15.06■□□□□ 0
COPS7B-221ENST00000488111 IVNS1ABPQ9Y6Y0 642 aa15.06■□□□□ 0
COPS7B-221ENST00000488111 ATXN2Q99700 1313 aaKnown RBP15.05■□□□□ 0
COPS7B-221ENST00000488111 RASSF10A6NK89 507 aa15.05■□□□□ 0
COPS7B-221ENST00000488111 PDE4DQ08499 809 aa15.05■□□□□ 0
COPS7B-221ENST00000488111 PPFIA1Q13136 1202 aa15.05■□□□□ 0
COPS7B-221ENST00000488111 XRRA1Q6P2D8 792 aa15.05■□□□□ 0
COPS7B-221ENST00000488111 PDXDC2PQ6P474 469 aa15.05■□□□□ 0
COPS7B-221ENST00000488111 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.05■□□□□ 0
COPS7B-221ENST00000488111 NLRX1Q86UT6 975 aa15.05■□□□□ 0
COPS7B-221ENST00000488111 CDK5RAP3Q96JB5 506 aa15.05■□□□□ 0
COPS7B-221ENST00000488111 INPP4AQ96PE3 977 aaPredicted RBP15.05■□□□□ 0
COPS7B-221ENST00000488111 CTAGE1Q96RT6 745 aa15.05■□□□□ 0
COPS7B-221ENST00000488111 MTRQ99707 1265 aa15.05■□□□□ 0
COPS7B-221ENST00000488111 TEKT3Q9BXF9 490 aa15.05■□□□□ 0
COPS7B-221ENST00000488111 LCTP09848 1927 aa15.05■□□□□ -0
COPS7B-221ENST00000488111 DHX15O43143 795 aaKnown RBP15.05■□□□□ -0
COPS7B-221ENST00000488111 KIF1CO43896 1103 aaKnown RBP15.05■□□□□ -0
COPS7B-221ENST00000488111 MED24O75448 989 aa15.05■□□□□ -0
COPS7B-221ENST00000488111 MNAT1P51948 309 aa15.05■□□□□ -0
COPS7B-221ENST00000488111 CYP4A11Q02928 519 aa15.05■□□□□ -0
COPS7B-221ENST00000488111 NOGQ13253 232 aa15.05■□□□□ -0
COPS7B-221ENST00000488111 FBXW10Q5XX13 1052 aa15.05■□□□□ -0
COPS7B-221ENST00000488111 C17orf99Q6UX52 265 aa15.05■□□□□ -0
COPS7B-221ENST00000488111 GRIN2DO15399 1336 aa15.04■□□□□ -0
COPS7B-221ENST00000488111 POTEB3A0JP26 581 aa15.04■□□□□ -0
COPS7B-221ENST00000488111 KANK3Q6NY19 840 aa15.04■□□□□ -0
COPS7B-221ENST00000488111 POTEBQ6S5H4 581 aa15.04■□□□□ -0
COPS7B-221ENST00000488111 KCNK18Q7Z418 384 aa15.04■□□□□ -0
COPS7B-221ENST00000488111 PLEKHH3Q7Z736 793 aa15.04■□□□□ -0
COPS7B-221ENST00000488111 CRACR2AQ9BSW2 395 aa15.04■□□□□ -0
COPS7B-221ENST00000488111 BLZF1Q9H2G9 400 aa15.04■□□□□ -0
COPS7B-221ENST00000488111 RGL1Q9NZL6 768 aa15.04■□□□□ -0
COPS7B-221ENST00000488111 GOLGA6CA6NDK9 693 aa15.04■□□□□ -0
COPS7B-221ENST00000488111 EIF3HO15372 352 aaKnown RBP eCLIP15.04■□□□□ -0
COPS7B-221ENST00000488111 GOLGA6DP0CG33 693 aa15.04■□□□□ -0
COPS7B-221ENST00000488111 EDNRBP24530 442 aa15.04■□□□□ -0
COPS7B-221ENST00000488111 CUL4BQ13620 913 aa15.04■□□□□ -0
COPS7B-221ENST00000488111 CYP26C1Q6V0L0 522 aa15.04■□□□□ -0
COPS7B-221ENST00000488111 GBP6Q6ZN66 633 aa15.04■□□□□ -0
COPS7B-221ENST00000488111 DPP9Q86TI2 863 aa15.04■□□□□ -0
COPS7B-221ENST00000488111 CATSPER3Q86XQ3 398 aa15.04■□□□□ -0
COPS7B-221ENST00000488111 GPRASP2Q96D09 838 aa15.04■□□□□ -0
COPS7B-221ENST00000488111 RPGRIP1Q96KN7 1286 aa15.04■□□□□ -0
COPS7B-221ENST00000488111 RIT2Q99578 217 aa15.04■□□□□ -0
COPS7B-221ENST00000488111 ABHD10Q9NUJ1 306 aa15.04■□□□□ -0
COPS7B-221ENST00000488111 GOLGA6AQ9NYA3 693 aa15.04■□□□□ -0
COPS7B-221ENST00000488111 KIAA1024Q9UPX6 916 aa15.04■□□□□ -0
COPS7B-221ENST00000488111 STRNO43815 780 aa15.03■□□□□ -0
COPS7B-221ENST00000488111 MAPK4P31152 587 aa15.03■□□□□ -0
COPS7B-221ENST00000488111 PPP2R5CQ13362 524 aa15.03■□□□□ -0
COPS7B-221ENST00000488111 GNPTABQ3T906 1256 aa15.03■□□□□ -0
COPS7B-221ENST00000488111 FILIP1LQ4L180 1135 aa15.03■□□□□ -0
COPS7B-221ENST00000488111 EIF2AK1Q9BQI3 630 aaKnown RBP15.03■□□□□ -0
COPS7B-221ENST00000488111 TELO2Q9Y4R8 837 aa15.03■□□□□ -0
COPS7B-221ENST00000488111 SYNRGQ9UMZ2 1314 aa15.03■□□□□ -0
COPS7B-221ENST00000488111 POTEFA5A3E0 1075 aa15.03■□□□□ -0
COPS7B-221ENST00000488111 CA12O43570 354 aa15.03■□□□□ -0
COPS7B-221ENST00000488111 SPATA31C1P0DKV0 1188 aa15.03■□□□□ -0
COPS7B-221ENST00000488111 SP2Q02086 613 aa15.03■□□□□ -0
COPS7B-221ENST00000488111 SP4Q02446 784 aa15.03■□□□□ -0
COPS7B-221ENST00000488111 CTTNQ14247 550 aaKnown RBP15.03■□□□□ -0
COPS7B-221ENST00000488111 SKIDA1Q1XH10 827 aa15.03■□□□□ -0
COPS7B-221ENST00000488111 ZNF792Q3KQV3 632 aa15.03■□□□□ -0
COPS7B-221ENST00000488111 POTEGQ6S5H5 508 aa15.03■□□□□ -0
COPS7B-221ENST00000488111 SH3RF1Q7Z6J0 888 aa15.03■□□□□ -0
COPS7B-221ENST00000488111 ERMNQ8TAM6 284 aa15.03■□□□□ -0
COPS7B-221ENST00000488111 DYDC2Q96IM9 177 aa15.03■□□□□ -0
COPS7B-221ENST00000488111 MMS19Q96T76 1030 aa15.03■□□□□ -0
COPS7B-221ENST00000488111 PYM1Q9BRP8 204 aaKnown RBP15.03■□□□□ -0
COPS7B-221ENST00000488111 SELENOOQ9BVL4 669 aa15.03■□□□□ -0
COPS7B-221ENST00000488111 CAPS2Q9BXY5 557 aa15.03■□□□□ -0
COPS7B-221ENST00000488111 BLOC1S4Q9NUP1 217 aa15.03■□□□□ -0
COPS7B-221ENST00000488111 SAMM50Q9Y512 469 aa15.03■□□□□ -0
COPS7B-221ENST00000488111 SPATA31C2B4DYI2 1134 aa15.02■□□□□ -0
COPS7B-221ENST00000488111 E9PMD0 336 aa15.02■□□□□ -0
COPS7B-221ENST00000488111 STAM2O75886 525 aa15.02■□□□□ -0
COPS7B-221ENST00000488111 B3GNT9Q6UX72 402 aa15.02■□□□□ -0
COPS7B-221ENST00000488111 CCNI2Q6ZMN8 369 aaPredicted RBP15.02■□□□□ -0
COPS7B-221ENST00000488111 BCAS4Q8TDM0 211 aa15.02■□□□□ -0
COPS7B-221ENST00000488111 SH3GL2Q99962 352 aa15.02■□□□□ -0
COPS7B-221ENST00000488111 TBC1D22BQ9NU19 505 aa15.02■□□□□ -0
COPS7B-221ENST00000488111 CD44P16070 742 aaKnown RBP15.02□□□□□ -0.01
COPS7B-221ENST00000488111 KCNA2P16389 499 aa15.02□□□□□ -0.01
COPS7B-221ENST00000488111 PSMC6P62333 389 aa15.02□□□□□ -0.01
COPS7B-221ENST00000488111 GRB14Q14449 540 aa15.02□□□□□ -0.01
COPS7B-221ENST00000488111 TMEM119Q4V9L6 283 aa15.02□□□□□ -0.01
COPS7B-221ENST00000488111 PAPD7Q5XG87 772 aaKnown RBP15.02□□□□□ -0.01
COPS7B-221ENST00000488111 HAUS3Q68CZ6 603 aa15.02□□□□□ -0.01
COPS7B-221ENST00000488111 MIER3Q7Z3K6 550 aa15.02□□□□□ -0.01
COPS7B-221ENST00000488111 TPH2Q8IWU9 490 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms