RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 MAFO75444 373 aaPredicted RBP12.25□□□□□ -0.45
HDLBP-242ENST00000488013 GJB1P08034 283 aa12.25□□□□□ -0.45
HDLBP-242ENST00000488013 ATP4AP20648 1035 aa12.25□□□□□ -0.45
HDLBP-242ENST00000488013 MARK3P27448 753 aa12.25□□□□□ -0.45
HDLBP-242ENST00000488013 SARSP49591 514 aaKnown RBP12.25□□□□□ -0.45
HDLBP-242ENST00000488013 PSEN2P49810 448 aa12.25□□□□□ -0.45
HDLBP-242ENST00000488013 PTPN11Q06124 597 aaPredicted RBP12.25□□□□□ -0.45
HDLBP-242ENST00000488013 PPFIA1Q13136 1202 aa12.25□□□□□ -0.45
HDLBP-242ENST00000488013 DHX8Q14562 1220 aaKnown RBP12.25□□□□□ -0.45
HDLBP-242ENST00000488013 PPP2R5AQ15172 486 aa12.25□□□□□ -0.45
HDLBP-242ENST00000488013 LRRC41Q15345 812 aa12.25□□□□□ -0.45
HDLBP-242ENST00000488013 KIAA0753Q2KHM9 967 aa12.25□□□□□ -0.45
HDLBP-242ENST00000488013 NFRKBQ6P4R8 1299 aa12.25□□□□□ -0.45
HDLBP-242ENST00000488013 TRIM50Q86XT4 487 aa12.25□□□□□ -0.45
HDLBP-242ENST00000488013 C7orf31Q8N865 590 aa12.25□□□□□ -0.45
HDLBP-242ENST00000488013 UNC93B1Q9H1C4 597 aa12.25□□□□□ -0.45
HDLBP-242ENST00000488013 DHX33Q9H6R0 707 aaKnown RBP12.25□□□□□ -0.45
HDLBP-242ENST00000488013 PARVGQ9HBI0 331 aa12.25□□□□□ -0.45
HDLBP-242ENST00000488013 EXOC1Q9NV70 894 aa12.25□□□□□ -0.45
HDLBP-242ENST00000488013 TUBE1Q9UJT0 475 aa12.25□□□□□ -0.45
HDLBP-242ENST00000488013 OGDHLQ9ULD0 1010 aa12.25□□□□□ -0.45
HDLBP-242ENST00000488013 PCDHA5Q9Y5H7 936 aa12.25□□□□□ -0.45
HDLBP-242ENST00000488013 PHLPP2Q6ZVD8 1323 aa12.25□□□□□ -0.45
HDLBP-242ENST00000488013 PCNTO95613 3336 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 FRMD3A2A2Y4 597 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 MYMKA6NI61 221 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 ASAP2O43150 1006 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 FAM13AO94988 1023 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 RPN1P04843 607 aaKnown RBP12.24□□□□□ -0.45
HDLBP-242ENST00000488013 ASGR1P07306 291 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 LCTP09848 1927 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 ZNF286BP0CG31 522 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 MAPTP10636 758 aaKnown RBP12.24□□□□□ -0.45
HDLBP-242ENST00000488013 INSRRP14616 1297 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 SMTNP53814 917 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 BEX3Q00994 111 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 PNOCQ13519 176 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 ALCAMQ13740 583 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 MXD4Q14582 209 aaPredicted RBP12.24□□□□□ -0.45
HDLBP-242ENST00000488013 KCNA10Q16322 511 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 ZSCAN23Q3MJ62 389 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 MTERF2Q49AM1 385 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 IER5Q5VY09 327 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 CCSAPQ6IQ19 270 aaPredicted RBP12.24□□□□□ -0.45
HDLBP-242ENST00000488013 TAF2Q6P1X5 1199 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 SESTD1Q86VW0 696 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 ANKLE1Q8NAG6 615 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 MLKLQ8NB16 471 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 LENG1Q96BZ8 264 aaPredicted RBP12.24□□□□□ -0.45
HDLBP-242ENST00000488013 IFT74Q96LB3 600 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 DEFB118Q96PH6 123 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 PHF12Q96QT6 1004 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 MTRQ99707 1265 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 TMEM106CQ9BVX2 250 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 NAT10Q9H0A0 1025 aaKnown RBP12.24□□□□□ -0.45
HDLBP-242ENST00000488013 RNPEPQ9H4A4 650 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 PANK4Q9NVE7 773 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 ANO10Q9NW15 660 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 TELO2Q9Y4R8 837 aa12.24□□□□□ -0.45
HDLBP-242ENST00000488013 LRRC37A2A6NM11 1700 aa12.23□□□□□ -0.45
HDLBP-242ENST00000488013 C17orf102A2RUQ5 167 aa12.23□□□□□ -0.45
HDLBP-242ENST00000488013 ZBTB39O15060 712 aa12.23□□□□□ -0.45
HDLBP-242ENST00000488013 USO1O60763 962 aaKnown RBP12.23□□□□□ -0.45
HDLBP-242ENST00000488013 RHOBTB3O94955 611 aa12.23□□□□□ -0.45
HDLBP-242ENST00000488013 IDEP14735 1019 aa12.23□□□□□ -0.45
HDLBP-242ENST00000488013 ZNF131P52739 623 aa12.23□□□□□ -0.45
HDLBP-242ENST00000488013 ACLYP53396 1101 aa12.23□□□□□ -0.45
HDLBP-242ENST00000488013 NPEPPSP55786 919 aa12.23□□□□□ -0.45
HDLBP-242ENST00000488013 DMP1Q13316 513 aaPredicted RBP12.23□□□□□ -0.45
HDLBP-242ENST00000488013 STIM1Q13586 685 aa12.23□□□□□ -0.45
HDLBP-242ENST00000488013 CUL4BQ13620 913 aa12.23□□□□□ -0.45
HDLBP-242ENST00000488013 GIT2Q14161 759 aa12.23□□□□□ -0.45
HDLBP-242ENST00000488013 GSE1Q14687 1217 aa12.23□□□□□ -0.45
HDLBP-242ENST00000488013 EMC2Q15006 297 aa12.23□□□□□ -0.45
HDLBP-242ENST00000488013 GRIK4Q16099 956 aa12.23□□□□□ -0.45
HDLBP-242ENST00000488013 ARSHQ5FYA8 562 aa12.23□□□□□ -0.45
HDLBP-242ENST00000488013 HERC4Q5GLZ8 1057 aaPredicted RBP12.23□□□□□ -0.45
HDLBP-242ENST00000488013 PLA2G4FQ68DD2 849 aa12.23□□□□□ -0.45
HDLBP-242ENST00000488013 CXCL17Q6UXB2 119 aa12.23□□□□□ -0.45
HDLBP-242ENST00000488013 KAT2BQ92831 832 aa12.23□□□□□ -0.45
HDLBP-242ENST00000488013 DNAJC19Q96DA6 116 aa12.23□□□□□ -0.45
HDLBP-242ENST00000488013 MAP7D2Q96T17 732 aa12.23□□□□□ -0.45
HDLBP-242ENST00000488013 REEP2Q9BRK0 252 aa12.23□□□□□ -0.45
HDLBP-242ENST00000488013 RUSC1Q9BVN2 902 aa12.23□□□□□ -0.45
HDLBP-242ENST00000488013 CRISPLD2Q9H0B8 497 aa12.23□□□□□ -0.45
HDLBP-242ENST00000488013 BLZF1Q9H2G9 400 aa12.23□□□□□ -0.45
HDLBP-242ENST00000488013 PDLIM7Q9NR12 457 aa12.23□□□□□ -0.45
HDLBP-242ENST00000488013 OLFML3Q9NRN5 406 aa12.23□□□□□ -0.45
HDLBP-242ENST00000488013 PHF24Q9UPV7 400 aa12.23□□□□□ -0.45
HDLBP-242ENST00000488013 MYH15Q9Y2K3 1946 aa12.23□□□□□ -0.45
HDLBP-242ENST00000488013 ZNFX1Q9P2E3 1918 aaKnown RBP12.22□□□□□ -0.45
HDLBP-242ENST00000488013 IGKV6-21A0A0C4DH24 114 aa12.22□□□□□ -0.45
HDLBP-242ENST00000488013 SGPL1O95470 568 aa12.22□□□□□ -0.45
HDLBP-242ENST00000488013 SMIM10L2AP0DMW4 78 aa12.22□□□□□ -0.45
HDLBP-242ENST00000488013 SMIM10L2BP0DMW5 78 aa12.22□□□□□ -0.45
HDLBP-242ENST00000488013 PLS3P13797 630 aa12.22□□□□□ -0.45
HDLBP-242ENST00000488013 ZNF445P59923 1031 aa12.22□□□□□ -0.45
HDLBP-242ENST00000488013 TFDP1Q14186 410 aa12.22□□□□□ -0.45
HDLBP-242ENST00000488013 STX1AQ16623 288 aa12.22□□□□□ -0.45
HDLBP-242ENST00000488013 FAM102BQ5T8I3 360 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms