RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 BHMT2Q9H2M3 363 aa14.83□□□□□ -0.04
COL4A6-207ENST00000487645 TMEM39AQ9NV64 488 aa14.83□□□□□ -0.04
COL4A6-207ENST00000487645 PITPNM1O00562 1244 aa14.82□□□□□ -0.04
COL4A6-207ENST00000487645 CAPN15O75808 1086 aa14.82□□□□□ -0.04
COL4A6-207ENST00000487645 PLA2G4BP0C869 781 aa14.82□□□□□ -0.04
COL4A6-207ENST00000487645 POLGP54098 1239 aaPredicted RBP14.82□□□□□ -0.04
COL4A6-207ENST00000487645 TRIM71Q2Q1W2 868 aaKnown RBP14.82□□□□□ -0.04
COL4A6-207ENST00000487645 PADI6Q6TGC4 694 aa14.82□□□□□ -0.04
COL4A6-207ENST00000487645 KIAA0319LQ8IZA0 1049 aa14.82□□□□□ -0.04
COL4A6-207ENST00000487645 METTL13Q8N6R0 699 aa14.82□□□□□ -0.04
COL4A6-207ENST00000487645 LINC01465Q8N7H1 131 aa14.82□□□□□ -0.04
COL4A6-207ENST00000487645 IQUBQ8NA54 791 aa14.82□□□□□ -0.04
COL4A6-207ENST00000487645 GBP4Q96PP9 640 aa14.82□□□□□ -0.04
COL4A6-207ENST00000487645 PANK2Q9BZ23 570 aa14.82□□□□□ -0.04
COL4A6-207ENST00000487645 CUEDC2Q9H467 287 aa14.82□□□□□ -0.04
COL4A6-207ENST00000487645 BLOC1S4Q9NUP1 217 aa14.82□□□□□ -0.04
COL4A6-207ENST00000487645 KCND2Q9NZV8 630 aa14.82□□□□□ -0.04
COL4A6-207ENST00000487645 TBX21Q9UL17 535 aa14.82□□□□□ -0.04
COL4A6-207ENST00000487645 KCNH3Q9ULD8 1083 aa14.82□□□□□ -0.04
COL4A6-207ENST00000487645 HPSEQ9Y251 543 aa14.82□□□□□ -0.04
COL4A6-207ENST00000487645 NR2E3Q9Y5X4 410 aa14.82□□□□□ -0.04
COL4A6-207ENST00000487645 A0A087X0B3 334 aa14.81□□□□□ -0.04
COL4A6-207ENST00000487645 CYP11B2P19099 503 aa14.81□□□□□ -0.04
COL4A6-207ENST00000487645 STAT6P42226 847 aa14.81□□□□□ -0.04
COL4A6-207ENST00000487645 SLC12A3P55017 1021 aa14.81□□□□□ -0.04
COL4A6-207ENST00000487645 CDC42EP1Q00587 391 aa14.81□□□□□ -0.04
COL4A6-207ENST00000487645 IER5Q5VY09 327 aa14.81□□□□□ -0.04
COL4A6-207ENST00000487645 RUFY4Q6ZNE9 571 aa14.81□□□□□ -0.04
COL4A6-207ENST00000487645 MCPH1Q8NEM0 835 aa14.81□□□□□ -0.04
COL4A6-207ENST00000487645 DNAJB3Q8WWF6 145 aa14.81□□□□□ -0.04
COL4A6-207ENST00000487645 TCP11Q8WWU5 503 aa14.81□□□□□ -0.04
COL4A6-207ENST00000487645 MRPS27Q92552 414 aaKnown RBP14.81□□□□□ -0.04
COL4A6-207ENST00000487645 DHX38Q92620 1227 aaKnown RBP14.81□□□□□ -0.04
COL4A6-207ENST00000487645 RAD54LQ92698 747 aa14.81□□□□□ -0.04
COL4A6-207ENST00000487645 ZBTB10Q96DT7 871 aa14.81□□□□□ -0.04
COL4A6-207ENST00000487645 NOC4LQ9BVI4 516 aaKnown RBP14.81□□□□□ -0.04
COL4A6-207ENST00000487645 TIPINQ9BVW5 301 aa14.81□□□□□ -0.04
COL4A6-207ENST00000487645 SUGCTQ9HAC7 445 aa14.81□□□□□ -0.04
COL4A6-207ENST00000487645 ATP6V0A4Q9HBG4 840 aa14.81□□□□□ -0.04
COL4A6-207ENST00000487645 PRKAG2Q9UGJ0 569 aa14.81□□□□□ -0.04
COL4A6-207ENST00000487645 USP25Q9UHP3 1055 aa14.81□□□□□ -0.04
COL4A6-207ENST00000487645 A0A1B0GVL5 298 aa14.8□□□□□ -0.04
COL4A6-207ENST00000487645 TRIM43BA6NCK2 446 aa14.8□□□□□ -0.04
COL4A6-207ENST00000487645 POLR2DO15514 142 aaKnown RBP14.8□□□□□ -0.04
COL4A6-207ENST00000487645 ASAP2O43150 1006 aa14.8□□□□□ -0.04
COL4A6-207ENST00000487645 TIMP1P01033 207 aa14.8□□□□□ -0.04
COL4A6-207ENST00000487645 CKBP12277 381 aa14.8□□□□□ -0.04
COL4A6-207ENST00000487645 PFKFB1P16118 471 aa14.8□□□□□ -0.04
COL4A6-207ENST00000487645 THPOP40225 353 aa14.8□□□□□ -0.04
COL4A6-207ENST00000487645 EMC2Q15006 297 aa14.8□□□□□ -0.04
COL4A6-207ENST00000487645 E2F4Q16254 413 aa14.8□□□□□ -0.04
COL4A6-207ENST00000487645 NAALADL2Q58DX5 795 aa14.8□□□□□ -0.04
COL4A6-207ENST00000487645 FAM26DQ5JW98 314 aa14.8□□□□□ -0.04
COL4A6-207ENST00000487645 RINT1Q6NUQ1 792 aa14.8□□□□□ -0.04
COL4A6-207ENST00000487645 C1orf186Q6ZWK4 172 aa14.8□□□□□ -0.04
COL4A6-207ENST00000487645 SV2BQ7L1I2 683 aa14.8□□□□□ -0.04
COL4A6-207ENST00000487645 SH3RF1Q7Z6J0 888 aa14.8□□□□□ -0.04
COL4A6-207ENST00000487645 C7orf61Q8IZ16 206 aa14.8□□□□□ -0.04
COL4A6-207ENST00000487645 PDILTQ8N807 584 aa14.8□□□□□ -0.04
COL4A6-207ENST00000487645 LRRC15Q8TF66 581 aa14.8□□□□□ -0.04
COL4A6-207ENST00000487645 LARP4BQ92615 738 aaKnown RBP14.8□□□□□ -0.04
COL4A6-207ENST00000487645 TRIM43Q96BQ3 446 aaPredicted RBP14.8□□□□□ -0.04
COL4A6-207ENST00000487645 MTRQ99707 1265 aa14.8□□□□□ -0.04
COL4A6-207ENST00000487645 HIPK3Q9H422 1215 aa14.8□□□□□ -0.04
COL4A6-207ENST00000487645 PARNO95453 639 aaKnown RBP14.79□□□□□ -0.04
COL4A6-207ENST00000487645 SSBP05455 408 aaKnown RBP eCLIP14.79□□□□□ -0.04
COL4A6-207ENST00000487645 GUCY2CP25092 1073 aa14.79□□□□□ -0.04
COL4A6-207ENST00000487645 CLCN3P51790 818 aa14.79□□□□□ -0.04
COL4A6-207ENST00000487645 MKRN4PQ13434 485 aaPredicted RBP14.79□□□□□ -0.04
COL4A6-207ENST00000487645 MCM6Q14566 821 aa14.79□□□□□ -0.04
COL4A6-207ENST00000487645 MXD4Q14582 209 aaPredicted RBP14.79□□□□□ -0.04
COL4A6-207ENST00000487645 LRRC71Q8N4P6 559 aa14.79□□□□□ -0.04
COL4A6-207ENST00000487645 FSIP1Q8NA03 581 aa14.79□□□□□ -0.04
COL4A6-207ENST00000487645 PSPC1Q8WXF1 523 aaKnown RBP14.79□□□□□ -0.04
COL4A6-207ENST00000487645 WNT8BQ93098 351 aa14.79□□□□□ -0.04
COL4A6-207ENST00000487645 MAP7D2Q96T17 732 aa14.79□□□□□ -0.04
COL4A6-207ENST00000487645 LRRC27Q9C0I9 530 aa14.79□□□□□ -0.04
COL4A6-207ENST00000487645 FAM49AQ9H0Q0 323 aaPredicted RBP14.79□□□□□ -0.04
COL4A6-207ENST00000487645 MAGEF1Q9HAY2 307 aa14.79□□□□□ -0.04
COL4A6-207ENST00000487645 XPNPEP1Q9NQW7 623 aa14.79□□□□□ -0.04
COL4A6-207ENST00000487645 SUCLA2Q9P2R7 463 aaPredicted RBP14.79□□□□□ -0.04
COL4A6-207ENST00000487645 M0QZ92 97 aa14.78□□□□□ -0.04
COL4A6-207ENST00000487645 USO1O60763 962 aaKnown RBP14.78□□□□□ -0.04
COL4A6-207ENST00000487645 PRPF40AO75400 957 aaKnown RBP14.78□□□□□ -0.04
COL4A6-207ENST00000487645 SLFN14P0C7P3 912 aa14.78□□□□□ -0.04
COL4A6-207ENST00000487645 RAG1P15918 1043 aa14.78□□□□□ -0.04
COL4A6-207ENST00000487645 SELPP16109 830 aa14.78□□□□□ -0.04
COL4A6-207ENST00000487645 ARL2P36404 184 aa14.78□□□□□ -0.04
COL4A6-207ENST00000487645 SYKP43405 635 aa14.78□□□□□ -0.04
COL4A6-207ENST00000487645 NDUFA8P51970 172 aa14.78□□□□□ -0.04
COL4A6-207ENST00000487645 UBE2HP62256 183 aa14.78□□□□□ -0.04
COL4A6-207ENST00000487645 AMPD3Q01432 767 aa14.78□□□□□ -0.04
COL4A6-207ENST00000487645 ARSHQ5FYA8 562 aa14.78□□□□□ -0.04
COL4A6-207ENST00000487645 ZNF618Q5T7W0 954 aa14.78□□□□□ -0.04
COL4A6-207ENST00000487645 PRPF31Q8WWY3 499 aaKnown RBP14.78□□□□□ -0.04
COL4A6-207ENST00000487645 TMEM143Q96AN5 459 aa14.78□□□□□ -0.04
COL4A6-207ENST00000487645 DHX58Q96C10 678 aa14.78□□□□□ -0.04
COL4A6-207ENST00000487645 TNMDQ9H2S6 317 aa14.78□□□□□ -0.04
COL4A6-207ENST00000487645 PRDM5Q9NQX1 630 aaPredicted RBP14.78□□□□□ -0.04
COL4A6-207ENST00000487645 KBTBD4Q9NVX7 518 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms