RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 ITIH3Q06033 890 aa17.04■□□□□ 0.32
PFDN4-204ENST00000487129 MRPL43Q8N983 215 aaKnown RBP17.04■□□□□ 0.32
PFDN4-204ENST00000487129 NCOA7Q8NI08 942 aa17.04■□□□□ 0.32
PFDN4-204ENST00000487129 CASP10Q92851 521 aa17.04■□□□□ 0.32
PFDN4-204ENST00000487129 NKD2Q969F2 451 aaPredicted RBP17.04■□□□□ 0.32
PFDN4-204ENST00000487129 NECTIN4Q96NY8 510 aa17.04■□□□□ 0.32
PFDN4-204ENST00000487129 TMEM117Q9H0C3 514 aa17.04■□□□□ 0.32
PFDN4-204ENST00000487129 ATP6V0A4Q9HBG4 840 aa17.04■□□□□ 0.32
PFDN4-204ENST00000487129 SEC63Q9UGP8 760 aaKnown RBP17.04■□□□□ 0.32
PFDN4-204ENST00000487129 hCG_1642624A0A1W2PR95 340 aa17.03■□□□□ 0.32
PFDN4-204ENST00000487129 GPR32O75388 356 aa17.03■□□□□ 0.32
PFDN4-204ENST00000487129 ATP4AP20648 1035 aa17.03■□□□□ 0.32
PFDN4-204ENST00000487129 ID4P47928 161 aa17.03■□□□□ 0.32
PFDN4-204ENST00000487129 SLC26A2P50443 739 aa17.03■□□□□ 0.32
PFDN4-204ENST00000487129 CLCN5P51795 746 aa17.03■□□□□ 0.32
PFDN4-204ENST00000487129 SART3Q15020 963 aaKnown RBP17.03■□□□□ 0.32
PFDN4-204ENST00000487129 KIZQ2M2Z5 673 aa17.03■□□□□ 0.32
PFDN4-204ENST00000487129 TPRNQ4KMQ1 711 aa17.03■□□□□ 0.32
PFDN4-204ENST00000487129 KANK3Q6NY19 840 aa17.03■□□□□ 0.32
PFDN4-204ENST00000487129 RALYLQ86SE5 291 aaKnown RBP17.03■□□□□ 0.32
PFDN4-204ENST00000487129 ZDHHC14Q8IZN3 488 aa17.03■□□□□ 0.32
PFDN4-204ENST00000487129 ADSSL1Q8N142 457 aa17.03■□□□□ 0.32
PFDN4-204ENST00000487129 CTCFLQ8NI51 663 aaPredicted RBP17.03■□□□□ 0.32
PFDN4-204ENST00000487129 TNPO1Q92973 898 aaKnown RBP17.03■□□□□ 0.32
PFDN4-204ENST00000487129 PPP1R16BQ96T49 567 aa17.03■□□□□ 0.32
PFDN4-204ENST00000487129 OSMRQ99650 979 aa17.03■□□□□ 0.32
PFDN4-204ENST00000487129 AGO4Q9HCK5 861 aaKnown RBP17.03■□□□□ 0.32
PFDN4-204ENST00000487129 PUF60Q9UHX1 559 aaKnown RBP17.03■□□□□ 0.32
PFDN4-204ENST00000487129 DNAH14Q0VDD8 3507 aa17.02■□□□□ 0.32
PFDN4-204ENST00000487129 SPDYE3A6NKU9 549 aa17.02■□□□□ 0.32
PFDN4-204ENST00000487129 GPR182O15218 404 aa17.02■□□□□ 0.32
PFDN4-204ENST00000487129 HBP1O60381 514 aa17.02■□□□□ 0.32
PFDN4-204ENST00000487129 CLASP2O75122 1294 aaKnown RBP17.02■□□□□ 0.32
PFDN4-204ENST00000487129 C22orf31O95567 290 aa17.02■□□□□ 0.32
PFDN4-204ENST00000487129 GSPT1P15170 499 aaKnown RBP17.02■□□□□ 0.32
PFDN4-204ENST00000487129 NPR3P17342 541 aa17.02■□□□□ 0.32
PFDN4-204ENST00000487129 KIF5BP33176 963 aa17.02■□□□□ 0.32
PFDN4-204ENST00000487129 PPM1AP35813 382 aa17.02■□□□□ 0.32
PFDN4-204ENST00000487129 CRYBB1P53674 252 aaPredicted RBP17.02■□□□□ 0.32
PFDN4-204ENST00000487129 MCTP2Q6DN12 878 aa17.02■□□□□ 0.32
PFDN4-204ENST00000487129 TYW1BQ6NUM6 668 aa17.02■□□□□ 0.32
PFDN4-204ENST00000487129 ABHD15Q6UXT9 468 aa17.02■□□□□ 0.32
PFDN4-204ENST00000487129 TMC7Q7Z402 723 aa17.02■□□□□ 0.32
PFDN4-204ENST00000487129 CCDC60Q8IWA6 550 aaPredicted RBP17.02■□□□□ 0.32
PFDN4-204ENST00000487129 SLC39A11Q8N1S5 342 aa17.02■□□□□ 0.32
PFDN4-204ENST00000487129 ZNF558Q96NG5 402 aa17.02■□□□□ 0.32
PFDN4-204ENST00000487129 LZTS2Q9BRK4 669 aa17.02■□□□□ 0.32
PFDN4-204ENST00000487129 COL1A2P08123 1366 aa17.02■□□□□ 0.31
PFDN4-204ENST00000487129 EP300Q09472 2414 aaPredicted RBP17.01■□□□□ 0.31
PFDN4-204ENST00000487129 PI15O43692 258 aa17.01■□□□□ 0.31
PFDN4-204ENST00000487129 RXRAP19793 462 aa17.01■□□□□ 0.31
PFDN4-204ENST00000487129 CLLU1OSQ5K130 101 aa17.01■□□□□ 0.31
PFDN4-204ENST00000487129 CES5AQ6NT32 575 aa17.01■□□□□ 0.31
PFDN4-204ENST00000487129 LRRC43Q8N309 656 aa17.01■□□□□ 0.31
PFDN4-204ENST00000487129 C12orf76Q8N812 135 aaPredicted RBP17.01■□□□□ 0.31
PFDN4-204ENST00000487129 SDF4Q9BRK5 362 aa17.01■□□□□ 0.31
PFDN4-204ENST00000487129 SPG21Q9NZD8 308 aa17.01■□□□□ 0.31
PFDN4-204ENST00000487129 LIMD1Q9UGP4 676 aa17.01■□□□□ 0.31
PFDN4-204ENST00000487129 DENND4AQ7Z401 1863 aa17.01■□□□□ 0.31
PFDN4-204ENST00000487129 MEIS1O00470 390 aa17■□□□□ 0.31
PFDN4-204ENST00000487129 VTNP04004 478 aa17■□□□□ 0.31
PFDN4-204ENST00000487129 MTHFRP42898 656 aa17■□□□□ 0.31
PFDN4-204ENST00000487129 SMC1AQ14683 1233 aaKnown RBP17■□□□□ 0.31
PFDN4-204ENST00000487129 CEP55Q53EZ4 464 aa17■□□□□ 0.31
PFDN4-204ENST00000487129 ODR4Q5SWX8 454 aa17■□□□□ 0.31
PFDN4-204ENST00000487129 KIAA1841Q6NSI8 718 aa17■□□□□ 0.31
PFDN4-204ENST00000487129 PGBD1Q96JS3 809 aa17■□□□□ 0.31
PFDN4-204ENST00000487129 USTQ9Y2C2 406 aa17■□□□□ 0.31
PFDN4-204ENST00000487129 DHX15O43143 795 aaKnown RBP16.99■□□□□ 0.31
PFDN4-204ENST00000487129 AOC1P19801 751 aa16.99■□□□□ 0.31
PFDN4-204ENST00000487129 GNAQP50148 359 aa16.99■□□□□ 0.31
PFDN4-204ENST00000487129 ZNF484Q5JVG2 852 aa16.99■□□□□ 0.31
PFDN4-204ENST00000487129 RARS2Q5T160 578 aaKnown RBP16.99■□□□□ 0.31
PFDN4-204ENST00000487129 ZNF598Q86UK7 904 aaKnown RBP16.99■□□□□ 0.31
PFDN4-204ENST00000487129 TMEM173Q86WV6 379 aaPredicted RBP16.99■□□□□ 0.31
PFDN4-204ENST00000487129 ECHDC2Q86YB7 292 aa16.99■□□□□ 0.31
PFDN4-204ENST00000487129 LINC01465Q8N7H1 131 aa16.99■□□□□ 0.31
PFDN4-204ENST00000487129 TDRD5Q8NAT2 981 aaKnown RBP16.99■□□□□ 0.31
PFDN4-204ENST00000487129 RWDD1Q9H446 243 aaPredicted RBP16.99■□□□□ 0.31
PFDN4-204ENST00000487129 EVPLQ92817 2033 aa16.99■□□□□ 0.31
PFDN4-204ENST00000487129 SH2B2O14492 632 aaPredicted RBP16.98■□□□□ 0.31
PFDN4-204ENST00000487129 HOXA2O43364 376 aa16.98■□□□□ 0.31
PFDN4-204ENST00000487129 EOMESO95936 686 aa16.98■□□□□ 0.31
PFDN4-204ENST00000487129 EPCAMP16422 314 aa16.98■□□□□ 0.31
PFDN4-204ENST00000487129 KRT17Q04695 432 aa16.98■□□□□ 0.31
PFDN4-204ENST00000487129 WWC2Q6AWC2 1192 aa16.98■□□□□ 0.31
PFDN4-204ENST00000487129 TMTC3Q6ZXV5 915 aa16.98■□□□□ 0.31
PFDN4-204ENST00000487129 CCDC105Q8IYK2 499 aa16.98■□□□□ 0.31
PFDN4-204ENST00000487129 SLC22A17Q8WUG5 538 aa16.98■□□□□ 0.31
PFDN4-204ENST00000487129 YTHDC1Q96MU7 727 aaKnown RBP16.98■□□□□ 0.31
PFDN4-204ENST00000487129 MTA3Q9BTC8 594 aa16.98■□□□□ 0.31
PFDN4-204ENST00000487129 ADAMTS10Q9H324 1103 aa16.98■□□□□ 0.31
PFDN4-204ENST00000487129 NCOR2Q9Y618 2525 aa16.97■□□□□ 0.31
PFDN4-204ENST00000487129 MED19A0JLT2 244 aaPredicted RBP16.97■□□□□ 0.31
PFDN4-204ENST00000487129 BACH1O14867 736 aa16.97■□□□□ 0.31
PFDN4-204ENST00000487129 PRC1O43663 620 aa16.97■□□□□ 0.31
PFDN4-204ENST00000487129 CHMLP26374 656 aa16.97■□□□□ 0.31
PFDN4-204ENST00000487129 PDXDC2PQ6P474 469 aa16.97■□□□□ 0.31
PFDN4-204ENST00000487129 HEATR3Q7Z4Q2 680 aa16.97■□□□□ 0.31
PFDN4-204ENST00000487129 RAB11FIP4Q86YS3 637 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms