RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 NAF1Q96HR8 494 aaKnown RBP5.04□□□□□ -1.6
SNRNP27-204ENST00000487029 CLUHP3Q96NS8 147 aa5.04□□□□□ -1.6
SNRNP27-204ENST00000487029 CD244Q9BZW8 370 aa5.04□□□□□ -1.6
SNRNP27-204ENST00000487029 ZDHHC5Q9C0B5 715 aa5.04□□□□□ -1.6
SNRNP27-204ENST00000487029 IFT57Q9NWB7 429 aa5.04□□□□□ -1.6
SNRNP27-204ENST00000487029 NDOR1Q9UHB4 597 aa5.04□□□□□ -1.6
SNRNP27-204ENST00000487029 TCRBV5S4A2TA0A5A2 114 aa5.03□□□□□ -1.6
SNRNP27-204ENST00000487029 FOXN1O15353 648 aa5.03□□□□□ -1.6
SNRNP27-204ENST00000487029 GNAT1P11488 350 aa5.03□□□□□ -1.6
SNRNP27-204ENST00000487029 GRK2P25098 689 aa5.03□□□□□ -1.6
SNRNP27-204ENST00000487029 GRK3P35626 688 aa5.03□□□□□ -1.6
SNRNP27-204ENST00000487029 ADCY8P40145 1251 aa5.03□□□□□ -1.6
SNRNP27-204ENST00000487029 KCNQ1P51787 676 aa5.03□□□□□ -1.6
SNRNP27-204ENST00000487029 SLC25A3Q00325 362 aa5.03□□□□□ -1.6
SNRNP27-204ENST00000487029 PTPROQ16827 1216 aa5.03□□□□□ -1.6
SNRNP27-204ENST00000487029 TM4SF20Q53R12 229 aa5.03□□□□□ -1.6
SNRNP27-204ENST00000487029 STYK1Q6J9G0 422 aa5.03□□□□□ -1.6
SNRNP27-204ENST00000487029 RSPO2Q6UXX9 243 aaPredicted RBP5.03□□□□□ -1.6
SNRNP27-204ENST00000487029 TMPRSS6Q8IU80 811 aa5.03□□□□□ -1.6
SNRNP27-204ENST00000487029 DHX37Q8IY37 1157 aaKnown RBP5.03□□□□□ -1.6
SNRNP27-204ENST00000487029 RPUSD2Q8IZ73 545 aaKnown RBP5.03□□□□□ -1.6
SNRNP27-204ENST00000487029 SLC7A14Q8TBB6 771 aa5.03□□□□□ -1.6
SNRNP27-204ENST00000487029 ZCRB1Q8TBF4 217 aaKnown RBP5.03□□□□□ -1.6
SNRNP27-204ENST00000487029 SCYL1Q96KG9 808 aa5.03□□□□□ -1.6
SNRNP27-204ENST00000487029 AGO3Q9H9G7 860 aaKnown RBP5.03□□□□□ -1.6
SNRNP27-204ENST00000487029 SLC52A2Q9HAB3 445 aa5.03□□□□□ -1.6
SNRNP27-204ENST00000487029 TRIM39Q9HCM9 518 aa5.03□□□□□ -1.6
SNRNP27-204ENST00000487029 PUF60Q9UHX1 559 aaKnown RBP5.03□□□□□ -1.6
SNRNP27-204ENST00000487029 AQP7O14520 342 aa5.02□□□□□ -1.61
SNRNP27-204ENST00000487029 BMP5P22003 454 aa5.02□□□□□ -1.61
SNRNP27-204ENST00000487029 IL13RA1P78552 427 aa5.02□□□□□ -1.61
SNRNP27-204ENST00000487029 SPIRE1Q08AE8 756 aa5.02□□□□□ -1.61
SNRNP27-204ENST00000487029 WDR72Q3MJ13 1102 aa5.02□□□□□ -1.61
SNRNP27-204ENST00000487029 LRCH2Q5VUJ6 765 aa5.02□□□□□ -1.61
SNRNP27-204ENST00000487029 LBX2Q6XYB7 198 aa5.02□□□□□ -1.61
SNRNP27-204ENST00000487029 BRAPQ7Z569 592 aa5.02□□□□□ -1.61
SNRNP27-204ENST00000487029 SGMS1Q86VZ5 419 aa5.02□□□□□ -1.61
SNRNP27-204ENST00000487029 PRRX2Q99811 253 aa5.02□□□□□ -1.61
SNRNP27-204ENST00000487029 ZFYVE21Q9BQ24 234 aa5.02□□□□□ -1.61
SNRNP27-204ENST00000487029 BRINP2Q9C0B6 783 aa5.02□□□□□ -1.61
SNRNP27-204ENST00000487029 INTS7Q9NVH2 962 aaKnown RBP5.02□□□□□ -1.61
SNRNP27-204ENST00000487029 MAGEC2Q9UBF1 373 aaPredicted RBP5.02□□□□□ -1.61
SNRNP27-204ENST00000487029 CDC42EP3Q9UKI2 254 aa5.02□□□□□ -1.61
SNRNP27-204ENST00000487029 ASXL2Q76L83 1435 aa5.01□□□□□ -1.61
SNRNP27-204ENST00000487029 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.01□□□□□ -1.61
SNRNP27-204ENST00000487029 FAM90A27PA6NNH2 459 aa5.01□□□□□ -1.61
SNRNP27-204ENST00000487029 DNAJC8O75937 253 aaPredicted RBP5.01□□□□□ -1.61
SNRNP27-204ENST00000487029 APPP05067 770 aa5.01□□□□□ -1.61
SNRNP27-204ENST00000487029 VIL1P09327 827 aaKnown RBP5.01□□□□□ -1.61
SNRNP27-204ENST00000487029 MYCLP1P12525 358 aaPredicted RBP5.01□□□□□ -1.61
SNRNP27-204ENST00000487029 NAT1P18440 290 aa5.01□□□□□ -1.61
SNRNP27-204ENST00000487029 SDSP20132 328 aa5.01□□□□□ -1.61
SNRNP27-204ENST00000487029 IBSPP21815 317 aaPredicted RBP5.01□□□□□ -1.61
SNRNP27-204ENST00000487029 GPR85P60893 370 aa5.01□□□□□ -1.61
SNRNP27-204ENST00000487029 FSTL1Q12841 308 aa5.01□□□□□ -1.61
SNRNP27-204ENST00000487029 RRP1BQ14684 758 aaKnown RBP5.01□□□□□ -1.61
SNRNP27-204ENST00000487029 GRM7Q14831 915 aa5.01□□□□□ -1.61
SNRNP27-204ENST00000487029 USP30Q70CQ3 517 aa5.01□□□□□ -1.61
SNRNP27-204ENST00000487029 KRT26Q7Z3Y9 468 aa5.01□□□□□ -1.61
SNRNP27-204ENST00000487029 ANKRD13AQ8IZ07 590 aa5.01□□□□□ -1.61
SNRNP27-204ENST00000487029 TMEM176AQ96HP8 235 aa5.01□□□□□ -1.61
SNRNP27-204ENST00000487029 GPATCH3Q96I76 525 aa5.01□□□□□ -1.61
SNRNP27-204ENST00000487029 GPRC5BQ9NZH0 403 aa5.01□□□□□ -1.61
SNRNP27-204ENST00000487029 TRAF6Q9Y4K3 522 aa5.01□□□□□ -1.61
SNRNP27-204ENST00000487029 COL4A3BPQ9Y5P4 624 aa5.01□□□□□ -1.61
SNRNP27-204ENST00000487029 A0A087X0B3 334 aa5□□□□□ -1.61
SNRNP27-204ENST00000487029 KRTAP23-1A1A580 65 aa5□□□□□ -1.61
SNRNP27-204ENST00000487029 PPM1GO15355 546 aaPredicted RBP5□□□□□ -1.61
SNRNP27-204ENST00000487029 HMGCRP04035 888 aa5□□□□□ -1.61
SNRNP27-204ENST00000487029 HMGB1P09429 215 aaKnown RBP5□□□□□ -1.61
SNRNP27-204ENST00000487029 HSP90B1P14625 803 aaKnown RBP5□□□□□ -1.61
SNRNP27-204ENST00000487029 PCOLCEQ15113 449 aa5□□□□□ -1.61
SNRNP27-204ENST00000487029 DPP8Q6V1X1 898 aaPredicted RBP5□□□□□ -1.61
SNRNP27-204ENST00000487029 FGD2Q7Z6J4 655 aa5□□□□□ -1.61
SNRNP27-204ENST00000487029 LRRTM3Q86VH5 581 aa5□□□□□ -1.61
SNRNP27-204ENST00000487029 THNSL2Q86YJ6 484 aa5□□□□□ -1.61
SNRNP27-204ENST00000487029 IFNL3Q8IZI9 196 aa5□□□□□ -1.61
SNRNP27-204ENST00000487029 GPR150Q8NGU9 434 aa5□□□□□ -1.61
SNRNP27-204ENST00000487029 OR14K1Q8NGZ2 314 aa5□□□□□ -1.61
SNRNP27-204ENST00000487029 PUM2Q8TB72 1066 aaKnown RBP eCLIP5□□□□□ -1.616e-9■□□□□ 10.9
SNRNP27-204ENST00000487029 SCLYQ96I15 445 aa5□□□□□ -1.61
SNRNP27-204ENST00000487029 MAGEB10Q96LZ2 347 aaPredicted RBP5□□□□□ -1.61
SNRNP27-204ENST00000487029 AURKAIP1Q9NWT8 199 aaPredicted RBP5□□□□□ -1.61
SNRNP27-204ENST00000487029 GIT1Q9Y2X7 761 aa5□□□□□ -1.61
SNRNP27-204ENST00000487029 hCG_2014768A0A024R1R8 64 aa4.99□□□□□ -1.61
SNRNP27-204ENST00000487029 CAPN14A8MX76 684 aa4.99□□□□□ -1.61
SNRNP27-204ENST00000487029 PDE8AO60658 829 aa4.99□□□□□ -1.61
SNRNP27-204ENST00000487029 RASGRP1O95267 797 aa4.99□□□□□ -1.61
SNRNP27-204ENST00000487029 CRTAMO95727 393 aa4.99□□□□□ -1.61
SNRNP27-204ENST00000487029 SOD2P04179 222 aa4.99□□□□□ -1.61
SNRNP27-204ENST00000487029 ASLP04424 464 aa4.99□□□□□ -1.61
SNRNP27-204ENST00000487029 PROZP22891 400 aa4.99□□□□□ -1.61
SNRNP27-204ENST00000487029 ADRA1BP35368 520 aa4.99□□□□□ -1.61
SNRNP27-204ENST00000487029 GUCY1A3Q02108 690 aa4.99□□□□□ -1.61
SNRNP27-204ENST00000487029 HGFACQ04756 655 aa4.99□□□□□ -1.61
SNRNP27-204ENST00000487029 EIF4HQ15056 248 aaKnown RBP4.99□□□□□ -1.61
SNRNP27-204ENST00000487029 BTBD8Q5XKL5 378 aa4.99□□□□□ -1.61
SNRNP27-204ENST00000487029 TRIM68Q6AZZ1 485 aa4.99□□□□□ -1.61
SNRNP27-204ENST00000487029 LAIR1Q6GTX8 287 aa4.99□□□□□ -1.61
SNRNP27-204ENST00000487029 MTDHQ86UE4 582 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms