RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 CAAP1Q9H8G2 361 aa6.38□□□□□ -1.39
SMC4-218ENST00000486711 HS3ST3A1Q9Y663 406 aa6.38□□□□□ -1.39
SMC4-218ENST00000486711 SLC30A1Q9Y6M5 507 aa6.38□□□□□ -1.39
SMC4-218ENST00000486711 B4E1Z4 1266 aa6.37□□□□□ -1.39
SMC4-218ENST00000486711 ARHGAP6O43182 974 aa6.37□□□□□ -1.39
SMC4-218ENST00000486711 CDC14BO60729 498 aa6.37□□□□□ -1.39
SMC4-218ENST00000486711 ASLP04424 464 aa6.37□□□□□ -1.39
SMC4-218ENST00000486711 VIL1P09327 827 aaKnown RBP6.37□□□□□ -1.39
SMC4-218ENST00000486711 IGFALSP35858 605 aa6.37□□□□□ -1.39
SMC4-218ENST00000486711 KCNQ1P51787 676 aa6.37□□□□□ -1.39
SMC4-218ENST00000486711 FOXE3Q13461 319 aa6.37□□□□□ -1.39
SMC4-218ENST00000486711 STILQ15468 1287 aa6.37□□□□□ -1.39
SMC4-218ENST00000486711 NRN1LQ496H8 165 aa6.37□□□□□ -1.39
SMC4-218ENST00000486711 AGBL4Q5VU57 503 aa6.37□□□□□ -1.39
SMC4-218ENST00000486711 LRRTM3Q86VH5 581 aa6.37□□□□□ -1.39
SMC4-218ENST00000486711 PPM1KQ8N3J5 372 aa6.37□□□□□ -1.39
SMC4-218ENST00000486711 WDR48Q8TAF3 677 aa6.37□□□□□ -1.39
SMC4-218ENST00000486711 WNK4Q96J92 1243 aa6.37□□□□□ -1.39
SMC4-218ENST00000486711 DPYSL5Q9BPU6 564 aa6.37□□□□□ -1.39
SMC4-218ENST00000486711 BTBD2Q9BX70 525 aa6.37□□□□□ -1.39
SMC4-218ENST00000486711 SMURF1Q9HCE7 757 aa6.37□□□□□ -1.39
SMC4-218ENST00000486711 TRIM39Q9HCM9 518 aa6.37□□□□□ -1.39
SMC4-218ENST00000486711 BTBD7Q9P203 1132 aa6.37□□□□□ -1.39
SMC4-218ENST00000486711 MAPRE3Q9UPY8 281 aa6.37□□□□□ -1.39
SMC4-218ENST00000486711 PCDHA9Q9Y5H5 950 aa6.37□□□□□ -1.39
SMC4-218ENST00000486711 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.36□□□□□ -1.39
SMC4-218ENST00000486711 CRTAMO95727 393 aa6.36□□□□□ -1.39
SMC4-218ENST00000486711 SDSP20132 328 aa6.36□□□□□ -1.39
SMC4-218ENST00000486711 MC4RP32245 332 aa6.36□□□□□ -1.39
SMC4-218ENST00000486711 RPS19P39019 145 aaKnown RBP6.36□□□□□ -1.39
SMC4-218ENST00000486711 ADCY8P40145 1251 aa6.36□□□□□ -1.39
SMC4-218ENST00000486711 STAT3P40763 770 aa6.36□□□□□ -1.39
SMC4-218ENST00000486711 DNM2P50570 870 aa6.36□□□□□ -1.39
SMC4-218ENST00000486711 NEK4P51957 841 aa6.36□□□□□ -1.39
SMC4-218ENST00000486711 LACTBP83111 547 aaPredicted RBP6.36□□□□□ -1.39
SMC4-218ENST00000486711 EIF4HQ15056 248 aaKnown RBP6.36□□□□□ -1.39
SMC4-218ENST00000486711 MIIPQ5JXC2 388 aa6.36□□□□□ -1.39
SMC4-218ENST00000486711 UBE2R2Q712K3 238 aaPredicted RBP6.36□□□□□ -1.39
SMC4-218ENST00000486711 THNSL2Q86YJ6 484 aa6.36□□□□□ -1.39
SMC4-218ENST00000486711 FAM89AQ96GI7 184 aa6.36□□□□□ -1.39
SMC4-218ENST00000486711 OR14A2Q96R54 314 aa6.36□□□□□ -1.39
SMC4-218ENST00000486711 C12orf65Q9H3J6 166 aaKnown RBP6.36□□□□□ -1.39
SMC4-218ENST00000486711 PUF60Q9UHX1 559 aaKnown RBP6.36□□□□□ -1.39
SMC4-218ENST00000486711 A0A087X0B3 334 aa6.35□□□□□ -1.39
SMC4-218ENST00000486711 DNAJC8O75937 253 aaPredicted RBP6.35□□□□□ -1.39
SMC4-218ENST00000486711 CPEP16870 476 aa6.35□□□□□ -1.39
SMC4-218ENST00000486711 ACO1P21399 889 aaKnown RBP6.35□□□□□ -1.39
SMC4-218ENST00000486711 NOLC1Q14978 699 aaKnown RBP eCLIP6.35□□□□□ -1.39
SMC4-218ENST00000486711 USP39Q53GS9 565 aaKnown RBP6.35□□□□□ -1.39
SMC4-218ENST00000486711 USP30Q70CQ3 517 aa6.35□□□□□ -1.39
SMC4-218ENST00000486711 OTOP2Q7RTS6 562 aa6.35□□□□□ -1.39
SMC4-218ENST00000486711 FGD2Q7Z6J4 655 aa6.35□□□□□ -1.39
SMC4-218ENST00000486711 TARS2Q9BW92 718 aaKnown RBP6.35□□□□□ -1.39
SMC4-218ENST00000486711 PLA2G12BQ9BX93 195 aa6.35□□□□□ -1.39
SMC4-218ENST00000486711 KIAA1683Q9H0B3 1180 aa6.35□□□□□ -1.39
SMC4-218ENST00000486711 TNPO3Q9Y5L0 923 aaKnown RBP6.35□□□□□ -1.39
SMC4-218ENST00000486711 MATN2O00339 956 aa6.34□□□□□ -1.39
SMC4-218ENST00000486711 KCNK3O14649 394 aa6.34□□□□□ -1.39
SMC4-218ENST00000486711 MPIG6BO95866 241 aa6.34□□□□□ -1.39
SMC4-218ENST00000486711 ECE1P42892 770 aa6.34□□□□□ -1.39
SMC4-218ENST00000486711 MEOX1P50221 254 aa6.34□□□□□ -1.39
SMC4-218ENST00000486711 AMPD3Q01432 767 aa6.34□□□□□ -1.39
SMC4-218ENST00000486711 KLF10Q13118 480 aa6.34□□□□□ -1.39
SMC4-218ENST00000486711 DUSP8Q13202 625 aa6.34□□□□□ -1.39
SMC4-218ENST00000486711 TBR1Q16650 682 aa6.34□□□□□ -1.39
SMC4-218ENST00000486711 LARP4Q71RC2 724 aaKnown RBP eCLIP6.34□□□□□ -1.39
SMC4-218ENST00000486711 CISD2Q8N5K1 135 aaKnown RBP6.34□□□□□ -1.39
SMC4-218ENST00000486711 ZNF503Q96F45 646 aa6.34□□□□□ -1.39
SMC4-218ENST00000486711 OR10A5Q9H207 317 aa6.34□□□□□ -1.39
SMC4-218ENST00000486711 SLITRK6Q9H5Y7 841 aa6.34□□□□□ -1.39
SMC4-218ENST00000486711 A0A0G2JNJ9 132 aa6.33□□□□□ -1.4
SMC4-218ENST00000486711 TCRBV16S1A1N1A0A5B0 115 aa6.33□□□□□ -1.4
SMC4-218ENST00000486711 GSG1L2A8MUP6 293 aa6.33□□□□□ -1.4
SMC4-218ENST00000486711 NPIPB8E9PQR5 432 aa6.33□□□□□ -1.4
SMC4-218ENST00000486711 RASGRP1O95267 797 aa6.33□□□□□ -1.4
SMC4-218ENST00000486711 MMEP08473 750 aa6.33□□□□□ -1.4
SMC4-218ENST00000486711 JMJD7P0C870 316 aa6.33□□□□□ -1.4
SMC4-218ENST00000486711 PCOLCEQ15113 449 aa6.33□□□□□ -1.4
SMC4-218ENST00000486711 CFAP100Q494V2 611 aa6.33□□□□□ -1.4
SMC4-218ENST00000486711 KANK2Q63ZY3 851 aa6.33□□□□□ -1.4
SMC4-218ENST00000486711 TMEM200BQ69YZ2 307 aa6.33□□□□□ -1.4
SMC4-218ENST00000486711 MAMDC4Q6UXC1 1216 aa6.33□□□□□ -1.4
SMC4-218ENST00000486711 Q6ZSN1 163 aa6.33□□□□□ -1.4
SMC4-218ENST00000486711 DDX46Q7L014 1031 aaKnown RBP6.33□□□□□ -1.4
SMC4-218ENST00000486711 DDX53Q86TM3 631 aaKnown RBP6.33□□□□□ -1.4
SMC4-218ENST00000486711 NOSTRINQ8IVI9 506 aa6.33□□□□□ -1.4
SMC4-218ENST00000486711 RTKN2Q8IZC4 609 aa6.33□□□□□ -1.4
SMC4-218ENST00000486711 SCLYQ96I15 445 aa6.33□□□□□ -1.4
SMC4-218ENST00000486711 AMNQ9BXJ7 453 aa6.33□□□□□ -1.4
SMC4-218ENST00000486711 OR10A2Q9H208 303 aa6.33□□□□□ -1.4
SMC4-218ENST00000486711 KCNH7Q9NS40 1196 aa6.33□□□□□ -1.4
SMC4-218ENST00000486711 UCKL1Q9NWZ5 548 aa6.33□□□□□ -1.4
SMC4-218ENST00000486711 Q9UFV3 132 aa6.33□□□□□ -1.4
SMC4-218ENST00000486711 MCM8Q9UJA3 840 aa6.33□□□□□ -1.4
SMC4-218ENST00000486711 CDC42EP3Q9UKI2 254 aa6.33□□□□□ -1.4
SMC4-218ENST00000486711 SCDO00767 359 aa6.32□□□□□ -1.4
SMC4-218ENST00000486711 NPTXRO95502 500 aa6.32□□□□□ -1.4
SMC4-218ENST00000486711 CD83Q01151 205 aa6.32□□□□□ -1.4
SMC4-218ENST00000486711 PTH1RQ03431 593 aa6.32□□□□□ -1.4
SMC4-218ENST00000486711 ABHD18Q0P651 414 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms